mRNA_H-canaliculatus_F_contig10645.628.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.530e-56 Identity = 88/98 (89.80%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVASGTALGAKRERGEEGHVEDPVDWEEDFGQQAAKAAGRGIPQEDR 294 LK RKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMT+EARQELDLETHWE VASGTALG+KR++GEEGHVEDPVDWEEDFGQ+AAKAAGRGI E+R Sbjct: 147 LKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAGRGIIDENR 244
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.890e-14 Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERV 159 LK RKL +A GITGAEG DCDDWM+VDC NLIVH ++ R+EL+LE WE + Sbjct: 158 LKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.220e-12 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVASGTALGAKRERGEEGHVEDPVD 228 LK RK + A G +GAEG DCDDWM+VD N+IVH M +AR+ LDLE HW+ + G + E H+E+ ++ Sbjct: 150 LKKRK-IKAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKNPEATLPQGGTESQ-REAHIEELIE 223
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL) HSP 1 Score: 62.4 bits (150), Expect = 2.560e-9 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERV 159 LK R++V+ G EG DCDDWM+ DC+N++VHFM ++ R+ L LE HWE + Sbjct: 212 LKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWENM 263
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A485K631_9STRA (Aste57867_1361 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K631_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.390e-8 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERV 159 +K R++ + G EG DCDDWM+ D +N+IVHFMT+E R L LE HWE + Sbjct: 257 MKAREMQDNFGYV-VEGRDCDDWMIADVNNIIVHFMTAETRHMLQLEDHWENM 308
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.450e-8 Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVAS 165 +K R++V+ G EG DCDDWM+ DC+N++VH M ++ R+ L LE HWE + + Sbjct: 131 MKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A5D6Y9S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.000e-8 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWE 153 ++ RKLV+ EG DCDDWM+ DC+N++VHFM ++ R+ L LE HWE Sbjct: 294 MRARKLVDEFEYA-VEGRDCDDWMIADCNNIVVHFMNADTRRILALEEHWE 343
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD) HSP 1 Score: 59.3 bits (142), Expect = 2.490e-8 Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 1 Query: 46 EGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERV 159 EG DCDDWM+ DC+N++VHFM + R+ L+LE HWE + Sbjct: 172 EGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWENM 209
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.590e-8 Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVAS 165 +K R++V+ G EG DCDDWM+ DC+N++VH M ++ R+ L LE HWE + + Sbjct: 247 MKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 300
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Match: A0A3R6VHZ6_9STRA (AP2/ERF domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VHZ6_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.720e-8 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 1 Query: 1 LKHRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVAS 165 +K R + + G EG DCDDWM+ D +N++VHFMT+E R+ L LE HWE + + Sbjct: 293 MKARNMDDDFGYV-VEGRDCDDWMIADVNNIVVHFMTAETRKMLALEDHWENMVN 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10645.628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10645.628.1 >prot_H-canaliculatus_F_contig10645.628.1 ID=prot_H-canaliculatus_F_contig10645.628.1|Name=mRNA_H-canaliculatus_F_contig10645.628.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=90bp MGITGAEGIDCDDWMLVDCDNLIVHFMTSEARQELDLETHWERVASGTALback to top mRNA from alignment at H-canaliculatus_F_contig10645:134..430+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10645.628.1 ID=mRNA_H-canaliculatus_F_contig10645.628.1|Name=mRNA_H-canaliculatus_F_contig10645.628.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=297bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10645:134..430+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10645:134..430+ >mRNA_H-canaliculatus_F_contig10645.628.1 ID=mRNA_H-canaliculatus_F_contig10645.628.1|Name=mRNA_H-canaliculatus_F_contig10645.628.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=540bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10645:134..430+ (Hapterophycus canaliculatus Oshoro5f female)back to top |