prot_H-canaliculatus_F_contig10640.627.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10640.627.1
Unique Nameprot_H-canaliculatus_F_contig10640.627.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length161
Homology
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.670e-64
Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    3 VPSEAEIAQEEAKLQRTYEKAMLDTMGYVPE-TEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            VPSE ++  EE +LQ  YE AML  +G+VPE +  G+KD+KGRYYFEKFGITP+HT+VH  LR  YV GL WCLA    GCVSW WFFPFHYVPM+SDLTGLR  F +V F L +PFLPFEQLLGCLPAASA  LP PY  LM SP+SPI DFYP DF++
Sbjct:  390 VPSEEDLDDEETRLQEAYEDAMLQVLGHVPEGSTPGQKDFKGRYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDLTGLRDMFGKVSFRLSKPFLPFEQLLGCLPAASAWCLPKPYALLMTSPDSPIADFYPADFKI 545          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.760e-59
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:    1 EEVPSEAEIAQEEAKLQRTYEKAMLDTMGYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 100
            EEVPSEAEIA EEAK QR+YEKAMLDTMGYVPETEDG KDYKGRYYFEKFGITPLHTE+H+RLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL
Sbjct:  389 EEVPSEAEIALEEAKRQRSYEKAMLDTMGYVPETEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 488          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S1V112_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V112_9STRA)

HSP 1 Score: 184 bits (467), Expect = 6.370e-57
Identity = 76/123 (61.79%), Postives = 100/123 (81.30%), Query Frame = 0
Query:   37 GEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDF 159
            G+KD+KGRYYFEK  +TP+  + H  LR AY+EGL+WCLAYYY+GC+SWGWF+P+H+ PM+SDLT L + F++++F+LGEP +PFEQL+GCLP AS+  +P  Y  LM SP+SPII FYP DF
Sbjct:   37 GQKDFKGRYYFEKLKLTPVDKQEHYALRQAYIEGLMWCLAYYYKGCISWGWFYPYHFGPMLSDLTNLEEMFTKIEFDLGEPLMPFEQLMGCLPPASSQLVPPKYRQLMTSPQSPIIQFYPTDF 159          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO)

HSP 1 Score: 198 bits (504), Expect = 7.110e-56
Identity = 94/174 (54.02%), Postives = 124/174 (71.26%), Query Frame = 0
Query:    1 EEVPSEAEIAQEEAKLQRTYEKAMLDTM-------------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            EE PS+AE+A  E++ Q  Y  +M++ +             G+ P TE G+KD+KGRYYFEK   TPL  E H  LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDL  + + F+E++FELGEP  PF+QL+GCLP AS+  +P PY  LM SP+SPII FYP +FEV
Sbjct:  377 EEGPSDAELAAVESEKQNGY-LSMIEALMQQPNWSPENFVAGWTPVTESGQKDFKGRYYFEKLKFTPLDKEKHWALRRSYMEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLIDIPRMFAEIEFELGEPLKPFQQLMGCLPPASSALVPKPYRFLMQSPDSPIIQFYPSEFEV 549          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.010e-53
Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 0
Query:    5 SEAEIAQEEAKLQRTYEKAMLDTM------------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            S+A+IA  EA+ Q  Y+ A++++M            G+ P T+  +KD+KGRYYFEKF + P   + H  LR AY+EGLLWCLAYYYRGC+SWGWF+P+HY PM+SDLT L+  F  + FE+G P  PFEQL+GCLP AS+  +P  Y  LM SP+SPII FYP++FEV
Sbjct:  402 SDAQIAAAEARKQTNYQ-AVIESMLEKNSSDGSLVDGWQPVTDPKKKDFKGRYYFEKFTMIPTDVKEHLALRKAYIEGLLWCLAYYYRGCISWGWFYPYHYGPMLSDLTNLKHVFDNINFEIGAPLKPFEQLMGCLPPASSALVPRSYRKLMSSPDSPIIQFYPDNFEV 569          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK)

HSP 1 Score: 189 bits (480), Expect = 1.200e-52
Identity = 91/161 (56.52%), Postives = 113/161 (70.19%), Query Frame = 0
Query:    4 PSEAEIAQEEAKLQRTYEKAMLDTMGYV---PETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            PSE E   ++A+ +      + + MG     P  ED    +K  YY EK G+ P H + H+RLR AY+EGL+WCLAYYY GCVSWGWF+P+HY P+ISDLT LR+ F++VKF+ G+PF PF QLLGCLPAAS  FLP+PY  LM    SPIIDFYPEDF+V
Sbjct:  264 PSEEEEEAQKAQTRAEVHARLQEAMGAEAAPPAPED--MGFKVAYYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDLTDLRRRFAQVKFDKGQPFTPFFQLLGCLPAASGKFLPAPYRKLMTEETSPIIDFYPEDFKV 422          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.250e-52
Identity = 90/167 (53.89%), Postives = 112/167 (67.07%), Query Frame = 0
Query:    4 PSEAEIAQEEAKLQRTYEKAMLDTMGYVPETE---------DGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            PS+AE+   +   Q  Y   + + MG     E          GEKD+KGRYYFEK  +TP+    H  LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL  L + F ++KF +G+P LPF+QL+ CLP ASA+ +P PY  LM SPESPI  FYP DFEV
Sbjct:  390 PSDAELKAADDAKQGNYLNMIQNIMGNQENREFVDGWNPVGPGEKDFKGRYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRNLPEMFEKIKFTVGKPILPFQQLMSCLPPASASLVPKPYRILMTSPESPIKQFYPTDFEV 556          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.060e-51
Identity = 90/168 (53.57%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    4 PSEAEIAQEEAKLQRTYEKAMLDTM----------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            PS+AE+   E   Q  Y   + D M          G+ P  + GEKD+KGRYYFEK  +TPL  E    LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL  L + F +++F +G+P LPF+QL+ CLP ASA+ +P PY +LM +P+SPII FYP  FEV
Sbjct:  390 PSDAELKAAEDAKQGDYLSMIQDLMEKHADGPFVDGWTP-PQPGEKDFKGRYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRELPEMFEKIQFTVGKPILPFQQLMSCLPPASASLVPKPYRTLMTAPDSPIIQFYPTSFEV 556          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA)

HSP 1 Score: 181 bits (459), Expect = 7.170e-50
Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 0
Query:   29 GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            G+   T   EKD+KGRYYFEK  + P   + H  LR +Y+EGL+WCLAYYYRGC+SWGWF+P+HY PMISDLT L   FS++ FE+GEP  PF+QL+GCLP ASA  +P  Y  LM SPESPI  FYPEDF V
Sbjct:  433 GWKAPTNLSEKDHKGRYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDLTNLPDVFSKINFEIGEPLKPFQQLMGCLPPASAALVPKIYRKLMGSPESPIKQFYPEDFVV 565          
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S2PS12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS12_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.750e-49
Identity = 84/167 (50.30%), Postives = 111/167 (66.47%), Query Frame = 0
Query:    4 PSEAEIAQEEAKLQRTYEKAMLDTM---------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 161
            P++ EIAQ E+K    Y  A++            G+ P  E G+KD+KGRYY+EK  + P +   H  LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDLT +   F  +KFE+G P  PFEQL+GCLP AS   +P  Y +LM +  SPI+ FYP DFEV
Sbjct:  141 PTDEEIAQNESKKHADYVTALMSLNLDGGKEVVDGWSP--EPGKKDFKGRYYYEKLKLLPTNINEHHALRKSYIEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLTNMPSVFESIKFEVGSPLKPFEQLMGCLPPASGILVPRIYRNLMTADLSPILQFYPTDFEV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4G8_9STRA3.670e-6466.88XRN 5'-3' exonuclease N-terminus-domain-containing... [more]
D7FME5_ECTSI1.760e-5994.005'-3' exoribonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A7S1V112_9STRA6.370e-5761.79Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A1Z5JKV0_FISSO7.110e-5654.025'-3' exoribonuclease 1 n=2 Tax=Fistulifera solari... [more]
A0A7S4RC29_9STRA1.010e-5353.855'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwell... [more]
A0A6V1PVC7_HETAK1.200e-5256.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A448ZS96_9STRA2.250e-5253.895'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EG33_9STRA1.060e-5153.575'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia a... [more]
A0A7S2PSP2_9STRA7.170e-5061.65Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2PS12_9STRA2.750e-4950.30Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.110.100coord: 97..161
e-value: 6.9E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR12341:SF415'-3' EXORIBONUCLEASE 2coord: 25..161
IPR041412Xrn1, helical domainPFAMPF17846XRN_Mcoord: 26..161
e-value: 8.0E-52
score: 176.7
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 25..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10640contigH-canaliculatus_F_contig10640:2391..4122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10640.627.1mRNA_H-canaliculatus_F_contig10640.627.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10640 2391..4122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10640.627.1 ID=prot_H-canaliculatus_F_contig10640.627.1|Name=mRNA_H-canaliculatus_F_contig10640.627.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp
EEVPSEAEIAQEEAKLQRTYEKAMLDTMGYVPETEDGEKDYKGRYYFEKF
GITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL
TGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESP
IIDFYPEDFEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0270735_3_exoribonuclease
IPR041412Xrn1_helical