mRNA_H-canaliculatus_F_contig10640.627.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.670e-64 Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 1 Query: 7 VPSEAEIAQEEAKLQRTYEKAMLDTMGYVPE-TEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 VPSE ++ EE +LQ YE AML +G+VPE + G+KD+KGRYYFEKFGITP+HT+VH LR YV GL WCLA GCVSW WFFPFHYVPM+SDLTGLR F +V F L +PFLPFEQLLGCLPAASA LP PY LM SP+SPI DFYP DF++ Sbjct: 390 VPSEEDLDDEETRLQEAYEDAMLQVLGHVPEGSTPGQKDFKGRYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDLTGLRDMFGKVSFRLSKPFLPFEQLLGCLPAASAWCLPKPYALLMTSPDSPIADFYPADFKI 545
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.760e-59 Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 1 Query: 1 EEVPSEAEIAQEEAKLQRTYEKAMLDTMGYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 300 EEVPSEAEIA EEAK QR+YEKAMLDTMGYVPETEDG KDYKGRYYFEKFGITPLHTE+H+RLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL Sbjct: 389 EEVPSEAEIALEEAKRQRSYEKAMLDTMGYVPETEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 488
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S1V112_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V112_9STRA) HSP 1 Score: 184 bits (467), Expect = 6.370e-57 Identity = 76/123 (61.79%), Postives = 100/123 (81.30%), Query Frame = 1 Query: 109 GEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDF 477 G+KD+KGRYYFEK +TP+ + H LR AY+EGL+WCLAYYY+GC+SWGWF+P+H+ PM+SDLT L + F++++F+LGEP +PFEQL+GCLP AS+ +P Y LM SP+SPII FYP DF Sbjct: 37 GQKDFKGRYYFEKLKLTPVDKQEHYALRQAYIEGLMWCLAYYYKGCISWGWFYPYHFGPMLSDLTNLEEMFTKIEFDLGEPLMPFEQLMGCLPPASSQLVPPKYRQLMTSPQSPIIQFYPTDF 159
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO) HSP 1 Score: 198 bits (504), Expect = 7.110e-56 Identity = 94/174 (54.02%), Postives = 124/174 (71.26%), Query Frame = 1 Query: 1 EEVPSEAEIAQEEAKLQRTYEKAMLDTM-------------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 EE PS+AE+A E++ Q Y +M++ + G+ P TE G+KD+KGRYYFEK TPL E H LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDL + + F+E++FELGEP PF+QL+GCLP AS+ +P PY LM SP+SPII FYP +FEV Sbjct: 377 EEGPSDAELAAVESEKQNGY-LSMIEALMQQPNWSPENFVAGWTPVTESGQKDFKGRYYFEKLKFTPLDKEKHWALRRSYMEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLIDIPRMFAEIEFELGEPLKPFQQLMGCLPPASSALVPKPYRFLMQSPDSPIIQFYPSEFEV 549
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.010e-53 Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 1 Query: 13 SEAEIAQEEAKLQRTYEKAMLDTM------------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 S+A+IA EA+ Q Y+ A++++M G+ P T+ +KD+KGRYYFEKF + P + H LR AY+EGLLWCLAYYYRGC+SWGWF+P+HY PM+SDLT L+ F + FE+G P PFEQL+GCLP AS+ +P Y LM SP+SPII FYP++FEV Sbjct: 402 SDAQIAAAEARKQTNYQ-AVIESMLEKNSSDGSLVDGWQPVTDPKKKDFKGRYYFEKFTMIPTDVKEHLALRKAYIEGLLWCLAYYYRGCISWGWFYPYHYGPMLSDLTNLKHVFDNINFEIGAPLKPFEQLMGCLPPASSALVPRSYRKLMSSPDSPIIQFYPDNFEV 569
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK) HSP 1 Score: 189 bits (480), Expect = 1.200e-52 Identity = 91/161 (56.52%), Postives = 113/161 (70.19%), Query Frame = 1 Query: 10 PSEAEIAQEEAKLQRTYEKAMLDTMGYV---PETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 PSE E ++A+ + + + MG P ED +K YY EK G+ P H + H+RLR AY+EGL+WCLAYYY GCVSWGWF+P+HY P+ISDLT LR+ F++VKF+ G+PF PF QLLGCLPAAS FLP+PY LM SPIIDFYPEDF+V Sbjct: 264 PSEEEEEAQKAQTRAEVHARLQEAMGAEAAPPAPED--MGFKVAYYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDLTDLRRRFAQVKFDKGQPFTPFFQLLGCLPAASGKFLPAPYRKLMTEETSPIIDFYPEDFKV 422
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.250e-52 Identity = 90/167 (53.89%), Postives = 112/167 (67.07%), Query Frame = 1 Query: 10 PSEAEIAQEEAKLQRTYEKAMLDTMGYVPETE---------DGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 PS+AE+ + Q Y + + MG E GEKD+KGRYYFEK +TP+ H LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL L + F ++KF +G+P LPF+QL+ CLP ASA+ +P PY LM SPESPI FYP DFEV Sbjct: 390 PSDAELKAADDAKQGNYLNMIQNIMGNQENREFVDGWNPVGPGEKDFKGRYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRNLPEMFEKIKFTVGKPILPFQQLMSCLPPASASLVPKPYRILMTSPESPIKQFYPTDFEV 556
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.060e-51 Identity = 90/168 (53.57%), Postives = 115/168 (68.45%), Query Frame = 1 Query: 10 PSEAEIAQEEAKLQRTYEKAMLDTM----------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 PS+AE+ E Q Y + D M G+ P + GEKD+KGRYYFEK +TPL E LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL L + F +++F +G+P LPF+QL+ CLP ASA+ +P PY +LM +P+SPII FYP FEV Sbjct: 390 PSDAELKAAEDAKQGDYLSMIQDLMEKHADGPFVDGWTP-PQPGEKDFKGRYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRELPEMFEKIQFTVGKPILPFQQLMSCLPPASASLVPKPYRTLMTAPDSPIIQFYPTSFEV 556
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA) HSP 1 Score: 181 bits (459), Expect = 7.170e-50 Identity = 82/133 (61.65%), Postives = 98/133 (73.68%), Query Frame = 1 Query: 85 GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 G+ T EKD+KGRYYFEK + P + H LR +Y+EGL+WCLAYYYRGC+SWGWF+P+HY PMISDLT L FS++ FE+GEP PF+QL+GCLP ASA +P Y LM SPESPI FYPEDF V Sbjct: 433 GWKAPTNLSEKDHKGRYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDLTNLPDVFSKINFEIGEPLKPFQQLMGCLPPASAALVPKIYRKLMGSPESPIKQFYPEDFVV 565
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Match: A0A7S2PS12_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PS12_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.750e-49 Identity = 84/167 (50.30%), Postives = 111/167 (66.47%), Query Frame = 1 Query: 10 PSEAEIAQEEAKLQRTYEKAMLDTM---------GYVPETEDGEKDYKGRYYFEKFGITPLHTEVHERLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRKTFSEVKFELGEPFLPFEQLLGCLPAASANFLPSPYGSLMLSPESPIIDFYPEDFEV 483 P++ EIAQ E+K Y A++ G+ P E G+KD+KGRYY+EK + P + H LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDLT + F +KFE+G P PFEQL+GCLP AS +P Y +LM + SPI+ FYP DFEV Sbjct: 141 PTDEEIAQNESKKHADYVTALMSLNLDGGKEVVDGWSP--EPGKKDFKGRYYYEKLKLLPTNINEHHALRKSYIEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLTNMPSVFESIKFEVGSPLKPFEQLMGCLPPASGILVPRIYRNLMTADLSPILQFYPTDFEV 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10640.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10640.627.1 >prot_H-canaliculatus_F_contig10640.627.1 ID=prot_H-canaliculatus_F_contig10640.627.1|Name=mRNA_H-canaliculatus_F_contig10640.627.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp EEVPSEAEIAQEEAKLQRTYEKAMLDTMGYVPETEDGEKDYKGRYYFEKFback to top mRNA from alignment at H-canaliculatus_F_contig10640:2391..4122+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10640.627.1 ID=mRNA_H-canaliculatus_F_contig10640.627.1|Name=mRNA_H-canaliculatus_F_contig10640.627.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1732bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10640:2391..4122+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10640:2391..4122+ >mRNA_H-canaliculatus_F_contig10640.627.1 ID=mRNA_H-canaliculatus_F_contig10640.627.1|Name=mRNA_H-canaliculatus_F_contig10640.627.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=966bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10640:2391..4122+ (Hapterophycus canaliculatus Oshoro5f female)back to top |