prot_H-canaliculatus_F_contig1064.623.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1064.623.1
Unique Name	prot_H-canaliculatus_F_contig1064.623.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	221

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 3.390e-123
Identity = 180/220 (81.82%), Postives = 194/220 (88.18%), Query Frame = 0

Query:    1 MVGSQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            MV +Q+FLG+AATLIASS AFVAPMAVRS AP SSSS    SAGS YV TLPGAPFGDGKIFDPL LSDGA P DIKKWREAEIKHGRV+MLASLGVLVAEQ+HPLFMGP+YIGPAVDHFQEI+A+YPEFWVFSLLGMA IEY +I TAF  P AVTGEGGLKEDY PGDLGFDPL +KP+ EA L+ M+TKELNNGRLAMIGIAGMLVQEL+NP  ILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 9.620e-121
Identity = 174/217 (80.18%), Postives = 193/217 (88.94%), Query Frame = 0

Query:    4 SQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            S MFLGTAATLIASS AFVAPMAVRS AP SS+S    SAGS YV TLPGAPFGDGKIFDPL LSDGA PG+IK WREAEIKHGRV+MLA++GV+VAEQ+HPLFMGP+YIGPAVDHFQEI+A++PEFW FSLLGMA IEY +I+ A+AEP  VTGEGGL+++YSPGDLGFDPL +KPK +A LEKMQTKELNNGRLAMIGIAGMLVQELVNP  ILG
Sbjct:    5 SNMFLGTAATLIASSTAFVAPMAVRSAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 1.870e-114
Identity = 170/219 (77.63%), Postives = 187/219 (85.39%), Query Frame = 0

Query:    1 MVGSQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSIL 219
            MV SQMFLGTAA LIASS AFVAP+AVRS AP S++S    SAGS YV TLPGAPF DGKIFDPL LSDGAAPGDIKKWREAEIKHGRV+MLASLG+LVAE++HPLFMG ++IGPA+ HFQEI+A++PEFW FSLLGMA IEY +I TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L+ M+TKELNNGRLAMIGIAGML QELVN   IL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 7.600e-108
Identity = 162/217 (74.65%), Postives = 183/217 (84.33%), Query Frame = 0

Query:    4 SQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            S MFLGTAATLIASSAAFV PMAVRS AP SS+S    SAG+ Y+ TLPGA   +GKIFD L L+DGA PG+IK WREAEIKHGRV+MLA++GV+VAEQ+HP FMGP+YIGPAVDHFQEITAK+P+FW +SLLGMA IEY +I  A+AEP  VTGEGGL+++YSPGDLGFDP  IKPK +A LEKMQ KELNNGRLAMIGI GMLVQELVN   ILG
Sbjct:    5 SNMFLGTAATLIASSAAFVTPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.270e-93
Identity = 155/220 (70.45%), Postives = 162/220 (73.64%), Query Frame = 0

Query:    1 MVGSQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            MV SQMF+GTAATLIASS AFVAPMAVRSV    SS     SAGS YV TLPGAPF DGKIFDPLGLSDGAAPGDIKKWREAEIKHGRV+MLASLGV+VAE                            FW FSLLGMA IEY +I TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L+ M+TKELNNGRLAMIGIAGML QELVNP  ILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSVTTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 6.850e-92
Identity = 131/161 (81.37%), Postives = 144/161 (89.44%), Query Frame = 0

Query:   60 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            +IFDPLGLSDGAAPGDIKKWREAEIKHGRV+MLASLGV+VAEQ+HP FMGP+YIGPAVDHFQEI+A++PEFW FSLLGMA +EY +I TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L+ M+TKELNNGRLAMIGIAGML QELVNP  ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.960e-89
Identity = 132/161 (81.99%), Postives = 144/161 (89.44%), Query Frame = 0

Query:   60 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            +IFDPLGLSDGAAPGDIKKWREAEIKHGRV+MLASLGV+VAEQ+HP FMGP+YIGPAVDHFQEI+A++PEFW FSLLGMA IEY +I TAF  P AVTGEGGLKEDY PGDLGFDPL +KP  EA L+ M+TKELNNGRLAMIGIAGML QELVNP  ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 3.260e-88
Identity = 134/213 (62.91%), Postives = 167/213 (78.40%), Query Frame = 0

Query:    8 LGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVETLPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSILG 220
            +G A+   AS  AF+ P      A  +S++ +M SAGS YV TLPGAPF DGK++DP+GLS  A P DIKKWREAEIKHGRV+MLAS+GVLVAE FHPLF+GP+YIGPA+ HF+EITA++P+FW  +LL +A +EY+ I+  FAE D VTGEGG++ DY PGDLGFDPLG+ P+ E +L  M+TKELN+GRLAMIGI GM+VQELV P+ I G
Sbjct:   60 VGMASWCFASCEAFIVPTPTTLSARPTSTAARM-SAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

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BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 7.840e-87
Identity = 124/160 (77.50%), Postives = 142/160 (88.75%), Query Frame = 0

Query:   60 KIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSIL 219
            KIFDPLGL+DGA  GDIK WREAEIKHGRV+MLASLGVLVAE++HP FMGP+YIGPAVDHFQEI+A++PEFW FSLL +ALIEY +I+ A+AEP  VTGEGGL+++YSPGDLGFDPL +KP  +  LE MQTKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 7.890e-80
Identity = 134/224 (59.82%), Postives = 164/224 (73.21%), Query Frame = 0

Query:    1 MVGSQMFLGTAATLIASSAAFVAPMAV--RSVAPVSSSSLKMQSAGSAYVETLPGAPFG---DGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVAEQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAFAEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLAMIGIAGMLVQELVNPVSIL 219
            MV SQ+FLGTAATLIASSAAFVAP+A    S+A V++SS    +AGS Y  +LPGAPFG   +GK FDP GL+    P  IKKWREAE+KHGRVSMLA++G+LV+E FHPLFMGP YIGPAV+H Q+I   YP FWV SL  +A IE ++I  A+     VTG G LK +Y PGDLGFDPLG+ PK   D   +Q++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1064.623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7Q6_ECTSI	3.390e-123	81.82	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	9.620e-121	80.18	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	1.870e-114	77.63	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	7.600e-108	74.65	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5K8D0_9PHAE	1.270e-93	70.45	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7G7S5_ECTSI	6.850e-92	81.37	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	1.960e-89	81.99	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G5B4_ECTSI	3.260e-88	62.91	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	7.840e-87	77.50	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7FQG7_ECTSI	7.890e-80	59.82	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 50..211 e-value: 4.8E-38 score: 131.2
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 35..220 e-value: 1.2E-36 score: 128.2
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 9..214
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 9..214
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..35
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 36..220
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..35
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..20 score: 0.559
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 58..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1064	contig	H-canaliculatus_F_contig1064:4546..6616 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1064.623.1	mRNA_H-canaliculatus_F_contig1064.623.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1064 3793..6685 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1064.623.1 ID=prot_H-canaliculatus_F_contig1064.623.1|Name=mRNA_H-canaliculatus_F_contig1064.623.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=221bp
MVGSQMFLGTAATLIASSAAFVAPMAVRSVAPVSSSSLKMQSAGSAYVET
LPGAPFGDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVSMLASLGVLVA
EQFHPLFMGPNYIGPAVDHFQEITAKYPEFWVFSLLGMALIEYKSISTAF
AEPDAVTGEGGLKEDYSPGDLGFDPLGIKPKTEADLEKMQTKELNNGRLA
MIGIAGMLVQELVNPVSILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind