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Homology
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A6H5J6X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X1_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 1.640e-130 Identity = 313/641 (48.83%), Postives = 363/641 (56.63%), Query Frame = 3
Query: 96 MPGVHDLWGIWEVKEVNGRPRQTEARELLQRLADQ---------------------------------------------VMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVRGPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGHRHGSAAGQTAGNSAAVTGDLGGWECGLCTLINAFTISACDACGTERSAATAGASI----------GXXXXXXXTNGVATGREKRPTPATGAVSRVAGPLKTASTRSVKGSHSVRPSGSVGGGHSRGGGAGGA---PSKA-TWTCRQCPFNFPNGAERQTCESCGAARGVTEAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARNDRGRRE---DAIP-WACPKCTLVNDGNAVSCGVCQAKPPLATWHKA-TAAATSADRGRQGVTAGDGWTTARTGFVEA----------AAEFSSGGVRGRSTFGGSEATAMATSGARSGVRPRDDAF---------RVCRMCTLRNLSEASECAACGIPFAESEAAAASIGGSSE 1769
M G+ D+ G+WE+KEV GRPRQ +ARELLQ+LADQ V PICVAH+WKV LLLEF+P LLG+NVNRGQKICIRLRP SDEG+FYPYE ++GTMLHELVH +IGPHSAKFY++LDQL DECDKL REGITGRNMPFAG+GQ LGG R P DARAAALKAAEKRQRQQG+M GGQRLGG+SG+ S SD++S AQRAAAAA WR AVS+GC GH HG AG A + A GD WECGLCTL N+ T++ACDACG ERSA AG S+ XXXXXX G TGR+KRP P TGA + AG L+ ST + + R G+ GG PS TWTCR CPF+FPN +ER+TCESCGAAR + A GXXXXXXXXX V G + +P W C CT+VN G + C VC A+ P +A T W TA G AA+ SSGG GG+ G R+ P ++ RVCR+CTLRN EAS C ACGIP AESEAA A+ E
Sbjct: 1 MSGIGDMLGVWEIKEVKGRPRQADARELLQKLADQASPTTTELATAGLETCPTEHIAYVLPRIVVAAAEWILVGAVRFGLVKPICVAHKWKVVLLLEFIPNNPSLLGLNVNRGQKICIRLRPPSDEGSFYPYEFIIGTMLHELVHNQIGPHSAKFYRVLDQLNDECDKLTREGITGRNMPFAGDGQPLGGGRAPNDARAAALKAAEKRQRQQGIMGSGGQRLGGVSGS-SPSDAISAAQRAAAAAQWRHAVSQGCRGH-HGCTAGVKADDD-ADDGDH--WECGLCTLFNSLTVNACDACGKERSATPAGKSVRGRGXXXXXXXXXXXXXVAGGTTTGRQKRPAPTTGAAAG-AGRLQNKSTAGARMASDGRSVGAPRGGXXXXXXXXXXXRLPSAGRTWTCRSCPFSFPNVSERRTCESCGAARLLPADAGSGXXXXXXXXXAATA----------------VGGTTGGHTSWGAELLPSWTCEACTVVNPGMFLGCSVCGAERPADEAAEAGXXXXXXXXXXXXXATLSSEW-TAEVGXXXXXXXXXXXGWMAAQGSSGGTDCSVGVGGAAVGETVGFGGRTRDDPGMESCWSAQPTGETRVCRLCTLRNPPEASNCKACGIPLAESEAAVAATASGGE 618
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: D7FMC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC5_ECTSI) HSP 1 Score: 386 bits (992), Expect = 4.170e-114 Identity = 278/604 (46.03%), Postives = 334/604 (55.30%), Query Frame = 3
Query: 96 MPGVHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVRGPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGHRHGSAAGQTAGNSAAVTGDLGGWECGLCTLINAFTISACDACGTERSAATAGASIGXXXXXXXTNG-----------------VATGREKRPTPATGAVSRVAGPLKTASTRSVKGSHSVRPSGSVGGGHSRGGGAG-------GAPSKA-TWTCRQCPFNFPNGAERQTCESCGAARGVTEAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARNDRGRRE----DAIP-WACPKCTLVNDGNAVSCGVCQAKPPLAT-----------WHKATAAAT-SADRGRQGVTAGDGWTTAR--TGFVEAAAEFSSGGVRGRSTFGGS--EATAMATSGARSGVRPRDDAFRVCRMCTLRNLSEASECAACGIPFAESEAAAASIGGSSE 1769
MPG+ D+ G+WE+KEV GRPRQ EARELLQ+LADQV PICVAH+WKV LLLEF+P GLLG+NVNRGQKICIRLRP SDEG+FYPYE +LGTMLHELVH +IGPHSAKFY+MLDQL DECDKLIREGITGRNMPFAG+GQSLGG R P DARAAALKA QRLGG+SG+ VS+GCGGH HG AG+ G++ A GD WECGLCTL N+ T++ACDACG ERSA G S+ T G GP + +S G+ + SVG RG G PS TWTCR CPF+FPN +ER+TCESCGAAR + A GXXXXXXXXX R G + +P W C CT+VN G + C VC A+ P + AT ++ +A+ GR G GW A+ +G + + + VR GG + M + G+ +P +A R+CR+CTLRN EAS+C ACGIP A+SEAA A+ E
Sbjct: 1 MPGIDDMLGVWEIKEVKGRPRQAEARELLQKLADQVKPICVAHKWKVVLLLEFIPNNPGLLGLNVNRGQKICIRLRPPSDEGSFYPYEFILGTMLHELVHNQIGPHSAKFYRMLDQLNDECDKLIREGITGRNMPFAGDGQSLGGGRAPEDARAAALKAXXXXXXXXXXXXXXXQRLGGVSGSXXXXXXXXXXXXXXXXXXXXX-VSQGCGGH-HGCTAGEKTGDN-ADDGDH--WECGLCTLFNSLTVNACDACGKERSANPPGNSVRDRGAGSSTGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGRL-QKKSTAGARTASDGRSVGA--PRGXXXXXXXXXXXGLPSAGRTWTCRSCPFSFPNASERRTCESCGAARLLPADAGSGXXXXXXXXXAT------------------AIRGTTGGHTSWDAELLPSWTCDACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXNLATLSSEWTAEVGRGGGVTAGGWMAAQGSSGGTDCSVGVGTADVRETVGIGGRIRDDPGMESWGS---AQPAGEA-RMCRLCTLRNPPEASDCEACGIPLADSEAAVAATASGGE 574
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A2U1PKA2_ARTAN (WLM-like protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PKA2_ARTAN) HSP 1 Score: 179 bits (453), Expect = 9.580e-46 Identity = 111/275 (40.36%), Postives = 158/275 (57.45%), Query Frame = 3
Query: 105 VHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGV-RGP--ADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGH------RHGSAAGQTAGNSAAVTGDL----------GGWECGLCTLINAFTISACDACGTER 872
++DL +WE K +N + RQ EA+++L+++A QV PI +WKV LL EF P LLG+NVN G+++ +RLR ++E +F+PYE +L TMLHEL H + GPH+A FY +LD++ EC++L+ +GITG F G+ LGG R P + R AL AAE R ++ ++ G +RLGG S S + +SP Q AA AA R C ++A Q +S A L WECG+CTL+N C+ACGT+R
Sbjct: 3 LNDLNKVWETKPLNNKVRQDEAKQILEKVAKQVQPIMRKRKWKVKLLSEFCPPNPALLGLNVNGGEEVQLRLRRQNNEWDFFPYEQILDTMLHELCHNQFGPHNADFYNLLDEIRKECEELMAKGITGSGQGFDLRGKRLGGYSRQPPLSSLRQKALSAAENRVQRGTLLPSGPKRLGGDS---SMKEVLSPIQAAAMAAERRLHDDLWCSSQVEELPETSKASASQELSSSEAKPSTLVSSHGEGEPKASWECGVCTLLNQALALTCEACGTQR 274
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A6S7MWI1_LACSI (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A6S7MWI1_LACSI) HSP 1 Score: 175 bits (444), Expect = 9.760e-45 Identity = 105/266 (39.47%), Postives = 156/266 (58.65%), Query Frame = 3
Query: 105 VHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGV----RGPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGHRH----GSAAGQTAGNSAAVTGD--LGGWECGLCTLINAFTISACDACGTER 872
++DL +WEVK + + R+ EA+E+L+++A QV PI H+WKV +L EF P LLG+N+N G ++ +RLR ++E +F+PYE +L TMLHEL H + GPH+A FY +LD++ EC++L+ +GITG F G+ LGG + P+ R AL AA+ R + ++ G RLGG S +A +SP Q AA AA R C G++ + N ++ G+ W+CG CTL+N + C+ACGT R
Sbjct: 3 LNDLNKVWEVKPLK-KVREDEAKEILEKIAKQVQPIMRKHKWKVNILSEFCPPNPALLGLNINGGAEVKLRLRRQNNEWDFFPYEQILDTMLHELCHNQYGPHNADFYNLLDEIRKECEELMAKGITGTGRGFDLPGRRLGGYFRQQQTPSSLRQKALSAAQNRAQMGTLLPSGPHRLGGDSSMKTA---LSPVQAAAMAAERRLHDDLWCASKSFQEPSGTSEASVSQNISSSEGEPKASSWQCGTCTLLNQPLLLTCEACGTPR 264
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: T0PRL4_SAPDV (WLM domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PRL4_SAPDV) HSP 1 Score: 173 bits (439), Expect = 2.190e-44 Identity = 114/255 (44.71%), Postives = 150/255 (58.82%), Query Frame = 3
Query: 126 WEVKEVNGRPRQT---EARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREG---ITGRNMPFAGEGQSLGGVRGPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPA---QRAAAAAHWRAAVSKGCGGHRHGSAAGQTAGNSAAVTGDLGGWECGLCTLINAFTISACDACG 863
W++ + RQ+ EA+ +L+R+A V+PI Q++V LLEF PK A LLGMNVN G KI +RLRPA +F P+E+LLGTMLHELVHM+IGPH+A FYK+LD+LT E + L+ +G ITG AG+G +LGG A+AAA A ++ + Q V A G RLGG + A +AS ++PA Q+A AA R CG H S + G +A D GW C CT +N S C CG
Sbjct: 3 WQIPTIRALKRQSQVDEAQRILERIASYVLPIMTKRQYRVQQLLEFFPKNANLLGMNVNHGWKIYVRLRPAERPTSFLPFEHLLGTMLHELVHMKIGPHNAAFYKLLDELTSEMESLMAQGLIGITGAQFQNAGQGHALGGANARNVAKAAADAAIQRMRHQALVGANGSCRLGGDASATAAS--LTPAMLRQKALKAAERRRHDQLTCGTHDEPS---RQIGEAAPEPYD--GWSCDQCTFLNDERQSVCAMCG 250
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: UPI001F5D7973 (DNA-dependent metalloprotease WSS1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D7973) HSP 1 Score: 174 bits (440), Expect = 1.070e-43 Identity = 113/309 (36.57%), Postives = 153/309 (49.51%), Query Frame = 3
Query: 105 VHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVR---GPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGH-------------------------RHGSAAGQT--------------AGNSAAVTGDLGG-----------WECGLCTLINAFTISACDACGTER 872
V DL +WE++ + +P + AR +L R+A+QV PI +W+V +L EF PK LLG+NVNRG ++ +RLRP + NF PYE +L TMLHEL H+ GPH A+FYK+ D+L EC++L+ +GITG F G G+ LGG P R A L AA+KR R ++ G ++LGG + +SA +SP Q AA AA R CG H +H A T +G A GD WEC CTL+N C+ CGT +
Sbjct: 3 VGDLHKVWEIRALKRKPDEPSARAILDRIANQVQPIMRRRKWRVKVLSEFSPKNPRLLGLNVNRGVEVKLRLRPHGRDHNFIPYERVLDTMLHELAHIARGPHDAQFYKLWDELRKECEELVSKGITGPGQGFDGAGRRLGGFSIHPPPPSLRQATLSAAQKRARNGALLPSGPRKLGGNNDIMSA---LSPVQAAAMAAERRMQDDLWCGSHDQSGIDDSEDVAILEQAPNLTARDRKHTKAGKNTKVVFSSSSAECSTSSGPQVAAPGDSSSCRPTDAAISSLWECSACTLLNQPLAPICEVCGTAK 308
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A7J7QSS8_9CHLO (WLM domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QSS8_9CHLO) HSP 1 Score: 170 bits (430), Expect = 3.670e-43 Identity = 115/286 (40.21%), Postives = 155/286 (54.20%), Query Frame = 3
Query: 111 DLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVRG-------PADARAAAL-KAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGHRHGSAAGQTAGNSAAV--------------TGD---------LGGWECGLCTLINAFTISACDACGTERS 875
D + + E+K + G+ R+ EAR++L+R+A QV PI QW V L EF+P+ LLG+NVNRGQ++ IRLRPA EG+FY + ++LGTMLHEL H IGPH+A+FYK+LD+L E ++L+ +GI+G F G G P A A+ KAAE R RQQ +M G +LGG G ++PAQ AAAAA RA CG R + G+ TG+ +G W C CTL+N + C+AC T RS
Sbjct: 7 DRYQVQEIKTL-GKDREAEARQMLERVAKQVQPIMRKRQWTVRKLSEFIPRSPNLLGLNVNRGQEVKIRLRPAGREGSFYDWNHVLGTMLHELCHNRIGPHNAEFYKLLDELWSEAEELMDKGISGTGQGFDAPSVGRLGSHGFIPTHNPPEHKMADAMRKAAEARARQQALMPAGPCKLGGGPGYRH----MTPAQAAAAAAERRARDELWCGAGRSAEEVEREVGSGXXXXXXXXXXXXXXXXXTGNQLAGQRSDAVGTWVCPACTLVNGALVLQCEACLTVRS 287
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: UPI001F5DA817 (DNA-dependent metalloprotease WSS1-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DA817) HSP 1 Score: 171 bits (434), Expect = 6.680e-43 Identity = 96/211 (45.50%), Postives = 128/211 (60.66%), Query Frame = 3
Query: 111 DLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVR---GPADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGGH 734
D+ +WE++ + +P + AR LL R+A QV PI +W+V +L EF PK LLG+NVNRG ++ +RLRP + +F PYE +L TMLHEL H GPH A+FYK+ D+L EC++LI +GITG F G G+ LGG P R AAL AA+KR R ++ G ++LGG S +SA +SP Q AA AA R CG H
Sbjct: 5 DVHKVWEIRALKRKPDEPSARALLDRIAKQVQPIMRRRKWRVKVLSEFSPKNPSLLGLNVNRGAEVKLRLRPDGRDNDFIPYEEVLDTMLHELAHNARGPHDAQFYKLWDELRKECEELISKGITGPGQGFDGTGRRLGGFSVHPPPPSLRQAALSAAQKRARNGALLPSGPRKLGGNSDIMSA---LSPVQAAAMAAERRMQDDLWCGSH 212
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A4D8YQM0_SALSN (Uncharacterized protein n=3 Tax=Salvia TaxID=21880 RepID=A0A4D8YQM0_SALSN) HSP 1 Score: 170 bits (430), Expect = 1.390e-42 Identity = 109/276 (39.49%), Postives = 154/276 (55.80%), Query Frame = 3
Query: 105 VHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGV-RGP--ADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCGG---HRHGSAAGQTAGNSAAVTG-------------DLGGWECGLCTLINAFTISACDACGTERS 875
++DL +WE+K + + R+ EARE+L+R+A QV PI +WKV +L EF P LLG+N+ G ++ +RLR ++E +F+PY+++L TMLHEL H E GPH+A FY +LD+L EC++L+ +GITG F G+ LGG R P + R AL AAEKR R + ++ G +RLGG S + +SP Q AA AA R CG G + T+ T D W+C CTL+N C+ACGT +S
Sbjct: 17 LNDLNKVWEIKPLK-KVREDEAREILERVAKQVQPIMRKRKWKVKVLSEFCPPNPSLLGLNIGGGTEVKLRLRRPNNEWDFFPYDHILNTMLHELCHNEHGPHNADFYNLLDELRKECEELMAKGITGTGQGFDLPGKRLGGYSRQPPLSSLRQQALAAAEKRSRNEALLPHGPKRLGGDSSIKAV---LSPVQAAAMAAERRLHDDLWCGSKSLEHEGPSESPTSSLDVRTTRTSVLDSTSVQDQKDESSWQCDTCTLLNQQRALICEACGTPKS 288
BLAST of mRNA_H-canaliculatus_F_contig106.581.1 vs. uniprot
Match: A0A6P6X4N5_COFAR (DNA-dependent metalloprotease WSS1-like isoform X1 n=8 Tax=Coffea TaxID=13442 RepID=A0A6P6X4N5_COFAR) HSP 1 Score: 169 bits (428), Expect = 1.770e-42 Identity = 108/280 (38.57%), Postives = 153/280 (54.64%), Query Frame = 3
Query: 105 VHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLLLEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVHMEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVRGP---ADARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAAHWRAAVSKGCG-------GHRHGSAAGQTAGNSAAVTGDLG------------GWECGLCTLINAFTISACDACGTERSA 878
++DL +WEVK + R R+ EAR++L+R+A QV PI WKV +L EF P LLG+N+ G ++ +RLR ++E +F+PY+ +L TMLHEL H + GPH+A FY +LD++ EC+ L+ +GITG F G+ LGG + R +AL AAE R R+ ++ G RLGG S +A +SP Q AA AA R CG G S + N + + +LG W+C CTLIN C+ACGT++ A
Sbjct: 3 LNDLNKVWEVKPLR-RTRENEARQILERVAKQVQPIMRKRNWKVKVLSEFCPANPSLLGLNIGGGAEVKLRLRRPNNELDFFPYDQILDTMLHELCHNQYGPHNADFYNLLDEIRKECEDLMAKGITGTGQGFDLPGRRLGGFSHQPPLSSLRQSALAAAENRARRAAILPSGPMRLGGDSSIKAA---LSPIQAAAMAAERRLHDDVWCGSKSAESEGSSESSQSSTVRDNESDLMSNLGYAQSSGTKDLQLSWQCSTCTLINQPLALICEACGTKKCA 278
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 391.0 |
| Seed ortholog evalue | 1e-105 |
| Seed eggNOG ortholog | 2880.D7FMC5 |
| GOs | GO:0000322,GO:0000323,GO:0000324,GO:0000724,GO:0000725,GO:0000731,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006302,GO:0006310,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010224,GO:0010225,GO:0012505,GO:0016740,GO:0016787,GO:0016925,GO:0018130,GO:0018193,GO:0018205,GO:0019438,GO:0019538,GO:0019787,GO:0019789,GO:0019985,GO:0031967,GO:0031975,GO:0032182,GO:0032183,GO:0032446,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061659,GO:0061665,GO:0070011,GO:0070647,GO:0071704,GO:0071897,GO:0090304,GO:0140096,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1990414,GO:1990466 |
| EggNOG free text desc. | zinc ion transmembrane transporter activity |
| EggNOG OGs | KOG1558@1,KOG1558@2759 |
| Ec32 ortholog description | Zinc finger, RanBP2-type |
| Ec32 ortholog | Ec-17_003490.1 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 5534 |
| Cds size | 1779 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928714.7352643-UTR-H-canaliculatus_F_contig106:27416..27511 | 1622928714.7352643-UTR-H-canaliculatus_F_contig106:27416..27511 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig106 27417..27511 + |
| 1696845535.7015784-UTR-H-canaliculatus_F_contig106:27416..27511 | 1696845535.7015784-UTR-H-canaliculatus_F_contig106:27416..27511 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig106 27417..27511 + |
| 1622928714.8961053-UTR-H-canaliculatus_F_contig106:33661..37321 | 1622928714.8961053-UTR-H-canaliculatus_F_contig106:33661..37321 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig106 33662..37321 + |
| 1696845535.7904582-UTR-H-canaliculatus_F_contig106:33661..37321 | 1696845535.7904582-UTR-H-canaliculatus_F_contig106:33661..37321 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig106 33662..37321 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928714.7949996-CDS-H-canaliculatus_F_contig106:27511..27616 | 1622928714.7949996-CDS-H-canaliculatus_F_contig106:27511..27616 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 27512..27616 + |
| 1696845535.7168627-CDS-H-canaliculatus_F_contig106:27511..27616 | 1696845535.7168627-CDS-H-canaliculatus_F_contig106:27511..27616 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 27512..27616 + |
| 1622928714.8136797-CDS-H-canaliculatus_F_contig106:28770..28909 | 1622928714.8136797-CDS-H-canaliculatus_F_contig106:28770..28909 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 28771..28909 + |
| 1696845535.7274237-CDS-H-canaliculatus_F_contig106:28770..28909 | 1696845535.7274237-CDS-H-canaliculatus_F_contig106:28770..28909 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 28771..28909 + |
| 1622928714.8273234-CDS-H-canaliculatus_F_contig106:29555..29693 | 1622928714.8273234-CDS-H-canaliculatus_F_contig106:29555..29693 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 29556..29693 + |
| 1696845535.739505-CDS-H-canaliculatus_F_contig106:29555..29693 | 1696845535.739505-CDS-H-canaliculatus_F_contig106:29555..29693 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 29556..29693 + |
| 1622928714.854666-CDS-H-canaliculatus_F_contig106:30857..30949 | 1622928714.854666-CDS-H-canaliculatus_F_contig106:30857..30949 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 30858..30949 + |
| 1696845535.7483082-CDS-H-canaliculatus_F_contig106:30857..30949 | 1696845535.7483082-CDS-H-canaliculatus_F_contig106:30857..30949 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 30858..30949 + |
| 1622928714.869119-CDS-H-canaliculatus_F_contig106:31758..31889 | 1622928714.869119-CDS-H-canaliculatus_F_contig106:31758..31889 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 31759..31889 + |
| 1696845535.7578568-CDS-H-canaliculatus_F_contig106:31758..31889 | 1696845535.7578568-CDS-H-canaliculatus_F_contig106:31758..31889 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 31759..31889 + |
| 1622928714.8840642-CDS-H-canaliculatus_F_contig106:32487..33661 | 1622928714.8840642-CDS-H-canaliculatus_F_contig106:32487..33661 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 32488..33661 + |
| 1696845535.7667687-CDS-H-canaliculatus_F_contig106:32487..33661 | 1696845535.7667687-CDS-H-canaliculatus_F_contig106:32487..33661 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig106 32488..33661 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig106.581.1 >prot_H-canaliculatus_F_contig106.581.1 ID=prot_H-canaliculatus_F_contig106.581.1|Name=mRNA_H-canaliculatus_F_contig106.581.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=593bp
MPGVHDLWGIWEVKEVNGRPRQTEARELLQRLADQVMPICVAHQWKVPLL
LEFVPKEAGLLGMNVNRGQKICIRLRPASDEGNFYPYENLLGTMLHELVH
MEIGPHSAKFYKMLDQLTDECDKLIREGITGRNMPFAGEGQSLGGVRGPA
DARAAALKAAEKRQRQQGVMAGGGQRLGGLSGALSASDSVSPAQRAAAAA
HWRAAVSKGCGGHRHGSAAGQTAGNSAAVTGDLGGWECGLCTLINAFTIS
ACDACGTERSAATAGASIGGGNGGGGTNGVATGREKRPTPATGAVSRVAG
PLKTASTRSVKGSHSVRPSGSVGGGHSRGGGAGGAPSKATWTCRQCPFNF
PNGAERQTCESCGAARGVTEAASGGGGSGSDKGASSAGATRSGAAAAAAA
AAAAVARNDRGRREDAIPWACPKCTLVNDGNAVSCGVCQAKPPLATWHKA
TAAATSADRGRQGVTAGDGWTTARTGFVEAAAEFSSGGVRGRSTFGGSEA
TAMATSGARSGVRPRDDAFRVCRMCTLRNLSEASECAACGIPFAESEAAA
ASIGGSSEAEVWVMDEEEAGGNRRGAAAAAAARNEPEYIDLS* back to topmRNA from alignment at H-canaliculatus_F_contig106:27417..37321+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig106.581.1 ID=mRNA_H-canaliculatus_F_contig106.581.1|Name=mRNA_H-canaliculatus_F_contig106.581.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9905bp|location=Sequence derived from alignment at H-canaliculatus_F_contig106:27417..37321+ (Hapterophycus canaliculatus Oshoro5f female)
GTCGAGTTCGCTGCCCTTTCTCCCTCTGTCTGAAACAGACCAGCCTGGCA
CAGCTCGTTGTCAAAACGACGTAGTAGAGTTGGAGCTTCTGAAATATGCC
GGGAGTACATGACTTGTGGGGCATCTGGGAAGTCAAGGAGGTCAACGGTC
GGCCTCGGCAAACGGAAGCTAGAGAGCTGCTACAGAGGTTGGCCGATCAG
GCGAGTCAACCTGAACGGTACCTGATGCGATAAACTCTGCCGCGAGGGTA
GTATCTACCAGACTCTGATACAGAAGATAAGCCTTGTCTGCTGTCGTGCG
GATGTACGTTTCATATCGCTTGGCCGCGTTCGCTCTTCTCTCGTGACGTC
GGTGACCTTGATACTGCGAATTCGCGTTCAGTTCGAGGGTTGTTTAAAAA
GTTCCAGATCGATCGTTCTTATGCAAGGAAACACATCAAGCACTCACATC
TGCCGTGCAGCTGCGGCTGAGATATTTCCGCCACGGGCAAAACCATTTTT
CTTTAAAAACCAAAGTTAGGGGCCAGTGGACAGGCCTGTATGTTGTGATC
GTAGGGGCGGATTGGTCTGCCTCGCAGCGTGCAACATTGACAAAAACGAG
GGTGTTTATTTTCAAACTTTCAAAGTTGACATGACGGTCTGTTGGTTTGA
GCTCCCCCCGTTTGGGCGACGGCGCTCGCGCGCCACGGTCGTCATGGCCG
GTGTTTATCTCTCGACGATTCAATCTGTTGAAGGCATATTTGAGTCTGCA
AGTTGCTTTCTTGTGCATGGGATTACTTGTCTCTTTATGTCTCCCTCCAG
ACCGGCGAGACTCATCGCACGCGGTTCCCGCCCATCCCCCAAGCAGGCTA
CTGCAGCTTCAGGTACCATTGGGAGGCGCGAGTCTACGCGTCCCCGTTCG
TTCTACTCGTGGAGAATCACTGAGTGATCACCATCGCATGAGGAACAATC
ATCCACCGCAAGATATGCCGTTGGGAAGCGCTGCGCGTTCCTCACACTGC
ACCAGTGAGGGCCCCAGATATTGGAAACTTCACACGACACCTTGCATAAA
CGAAAGCCTCGAAGTGCTCGCCATCACACCGCAGGAAAGCTGATGTTCCA
CAAAGGAAAGCTGATGTTCCACAACTCTTCACGAGCCCGAACCCGAGTTG
AAGTACAACCCCTAAACCCAGGTCCAGAGGAAACAAGCCACCAGCAATCT
CCTCTTGTGGCACAAGCTTGGGAGTATGTGCGCCTTACCCTGCGGCCGCA
GACCTGTCCCTCACGCGTCATTCCCAGCTTTTGCTTTACCCCTATGTTGC
GCCGCCTCGTACATTGCGCTTTGTGGATTCCGCTTCCAATCCAAATCGCG
TCAGGTGATGCCGATCTGCGTTGCCCACCAGTGGAAGGTGCCGCTGCTGC
TGGAGTTCGTGCCCAAGGAAGCTGGGCTCCTCGGCATGAACGTGAACCGC
GGCCAAAAAATCTGCATCCGGTTGCGCCCGGCCTCCGACGAAGGCAAGTG
CTATTTTGATTCGTTTCCTGAAGGTACCCTGACAGTTTTCCCTGCATGTA
AGTAAAGTCTATCTTGTCCCCCGCCCTTTCGATTCCTCTCCCGGGTTCGG
TTGATTTCATACAGGCGCAAAAAGGAATTTTACCCCTACAAAGTCCATGG
TGTCAGGAGATAAATGCAAGGGGGATCTGCAGTTTGTCTTTAAGGTGTAC
GTATCCCACCTTCCCACTGGTGCCCTTCTACCAAATGGCAATCTTGAAAT
CGTGTTCATATGTCGTTCGGCGATCCCCTCCGACTGCGATGGGATGCTTC
GAGTATGCGACTGGACGATTCTCTCACGCCCATCGGAGAAAAACAGTCGA
TGGTCACATCCATTATGGGTCGGACAAAATTCTTCCTACCCAGGAGCGGT
TTTTGGAAGCGTTATTACCACGTACATAAAAATAACAGGGTGGTGGCTGA
GTTTGGTGTTGGCACCCTAATCTTCGTGGCAAAATCGGGCTTTGAGGGTC
CACGAAATGGGGGGCTCTCTTCCGTAATCTTAGCTATTCAATAGCATACC
TGTGATTCAGATTTTGGAGGTAATCATTGTTATCACACACTGCTGTGGGT
CGTCACTGGATATGGTCTTCTCGTTTTTCACATCGACAGGCAACTTTTAC
CCGTACGAGAACTTGCTAGGGACGATGCTTCACGAGCTGGTCCACATGGA
GATCGGGCCTCACAGCGCGAAGTTCTACAAGATGCTGGATCAGCTCACCG
ATGAGTGTGACAAGCTCATCCGTGAAGGTGTGATATCTATCCTAGGAAGG
ATGCGGTATCGTGGCCATTATTGCTGCTGCTGCGGCTGCTGCTTTTTCTT
TGCTGTGTTTTTGCTATTGGTGGAACTGTTGGTGGTCACGGCGGTGATAA
TTTGCTATTCATATGCCGGTCCTGAAGAAATCGTTGGCGTGACTATTTGT
GCCCATGGTTTTGTCGCTGAAAGTCCTTCTTCGCCTGTGCGACCCGGTTC
ATTTCAGGCTGACCAGTAACGCATTGAAGTGATACACAGCGCACGGACAC
GAGCATGAAGCAACAGCCCGCTTCTCCTTTCTTGTTTGAGCCGCCGATTC
GTTTCGATGGTTCCCGAGGGGGACGGTAAAGTGCCCTTGACTCTCTCACT
GAGTCCCCCCCTTCCCCTCTTCGCCTTGCTAGTCCCGTTTCGCACTTCTC
GGTCTGCCGTCTCCGGTTCAACAAAATTGGGGCTGCGCTTTTGACCGTCC
TTTGTGTTGTATCCCCCCCTTCTCCCAATTCTAGTTTAATCATCGGAGCT
GCGCATGTGGTAATTTGTTCCCCTCGTTGACTTTTCCACCAATATTTTAT
CAATATCATTACACGGAGTAGTAAGTTGGCGTTGCTTCTCATGGCTCGGC
AACGTCTCGGCCCCCTCCTTGGTGCCACGGGGCGGCCTCCAACATGAGTG
AATAGCCACCCCTCTTCCAACATGCAAGCAGGCTGTCCACTGTGCTTCTT
ATCATCCCCTTTGCTTCTGCGCAACTAGCATCTCCGAGTGAAACACACAC
ACCGATACAGAGGGAAACGTAAAACAAAATTGTCGCTCCTCAATCCTTGC
TCGGATCCTCGTGCCTGTTGTCACCGTCCCCCTCCCGGTCAGTGAAGCCG
CTAGCCGTCCCAGTGTGAGGTCGGCGTGTCTGCGACAAGCTTCTAGCCGG
GGCGCGTGGCTACAGCTGTATGACCTCTCCTTTCTAATCTTCAGATGTCC
ATACAGCACGCCCTTTCCGTACCGTATTTCCGTACCGTATACAGATTCGA
GACCCGCTCCACAACCACCAGATTCACCGCGTCTGGCTTAAGCACTCCGC
TTTTTTTCTGTGCTTTCTCCCCCGTGTCTCCATCTGTTCTTTTGCGCGTC
CTCTCTTCGCCCGCGTGCCCCCCCCGCTTCTCGGTCTCCAGGCATCACCG
GTCGGAATATGCCGTTTGCAGGAGAAGGGCAGTCTCTAGGAGGCGTGCGA
GGTCCGGCCGATGCTCGAGCCGCGGCGCTGAAGGTAAAGTACAGCAAGAG
CCACCATATTTGGCTGGCGACGAGAGTGTTGGCCTCTGAATTCCTCCCGT
GTTCGTATGTGTTCGCCCAGTTTGACACGCGGATCTGGCGCTAGATTGAT
GGGGACTGAGAGTGGGTGCGGCGCTGCTTTCGTTGAGCGCTGTGGGTTGG
CTGCGTCTAGCTGTCTTGTTGCTTCTGAGTTGGCCTTCTCTTGCTGTACC
TCTGCCGATCTCGTCACATCCGTCTGATTGCCTCTGCTTCTTGCTTGCTG
TGTGCCTGTGTCTGGTTGGTGCTTAATACGGTGACGACTCTCAGAGCCCC
AACAGTATGGGAGTCTTTGTCCTTCTATGAAAGAGTTGAGAGCACAGGAG
GAACGTCTTCCGTTTTTTGTTTTTTTGGGCTCGGCGGCATATGATTCTTC
ATTCTTTTGTAAGGGCATTAAAAACACAGTCTACGGAAGGACCTTTTTCC
TCTTTTGGGGTGGTATTTTTCCATTGGTGGGGTAAGCACGGACGCCTAAC
TGATCCTGCCCCTGTCCGTCGGAGCAACGAGGACGAAAAATTAACGCACC
GATTACGCCTCTGCTCTCCGTCTGATCCCTAGCTTCGTTATGCATCCCGA
AATGAAGGAACGTTCGGCCACGCGACTCGAAGAACGATGCAAAAAGAAAT
CCCGGGACACGCGCCGCGCGTACCGCAAACATCGGAAATACGCGTGGTTA
TCTTTCTTTGGTGTGATTCCAACTCCTACAATCTGTCGCCGATTTGTTGC
ATTCGTTCGACGGGGCGAAAAACGATCCCCCGGCGATGGCAGGCAGCGGA
GAAACGACAGCGGCAACAGGGGGTTATGGCAGGCGGGGGGCAGCGGCTGG
GTGGTCTGTCGGGCGCGTTATCAGCGTCGGATTCAGTGTCTCCAGCGCAA
CGTGCCGCAGCTGCCGCGCATTGGTAAGCTGTTGTTGTATTTATTGTCCT
TTTCGCTGTCATTCGTTCTTGTTGTTGTGGGTGGTGTTGGTGTTGTTGTG
TTATTATTGACGTTGATGTTGTTGTTGATATTGTTGTGGTTGGTGTTGGT
CGTATTGGTGATGATTCGTGATGGTGTTGATGCAGCTCTCTTTTTTGTTC
GCATCGTTCAAGTGTTGTGATTGCTGTTGATGCTGGGGTTGGTGGTGCTG
GTGGTGATGCTGCTTCGATGCGAAAACGGCGTGTGTGCGTCTCCAGCAAA
AATTGAGGCGATGTGGATATATGACAGTCTGTGCAAGAATCTGCATAATC
GAGATCCACGCAAGCGACAGCGACAGCAACAGCGACAGCAACAGCAACCG
CAACAGCACAAGCGACACCACCACAATCGACAAAAAGGAAAAGAACACAA
ACAACAACAGCTATTTAAAGCTGTACTGTACAGCTTATTGAAGTGTTATT
TCACGGCGGAAGCCTCGCTTGGCATTCAGGCAAGTTCACGAGTGAGATCG
AGGCGGCTCACCGTAGTCCACAAGCATGTCAATCAATTGACCGCCATGAC
GCGCCCGACGCTTCCCCTCAGGAGGGCCGCCGTCAGCAAAGGGTGCGGAG
GCCACCGCCATGGCTCCGCCGCGGGGCAGACAGCAGGTAATTCCGCCGCC
GTCACCGGCGACCTGGGCGGCTGGGAGTGCGGGCTCTGCACCCTGATCAA
CGCCTTCACTATCAGCGCATGCGACGCTTGTGGAACCGAGCGATCTGCGG
CTACCGCTGGTGCTTCCATCGGCGGTGGCAATGGTGGCGGTGGCACCAAC
GGCGTCGCAACCGGCCGCGAAAAGCGGCCCACCCCAGCAACAGGAGCGGT
GTCCAGGGTTGCAGGCCCCCTGAAAACGGCAAGCACCCGGTCGGTCAAAG
GTAGCCACTCTGTGAGGCCCTCCGGCAGTGTCGGCGGTGGGCACAGTAGA
GGCGGCGGCGCCGGCGGTGCCCCGTCGAAGGCCACCTGGACTTGCCGGCA
GTGCCCGTTCAACTTTCCAAACGGGGCGGAGAGACAAACGTGCGAGTCAT
GCGGGGCGGCGCGGGGCGTGACCGAGGCTGCAAGCGGCGGCGGCGGTAGC
GGCAGCGATAAAGGCGCTAGCAGCGCCGGGGCGACGAGGAGTGGGGCAGC
GGCGGCGGCGGCGGCGGCAGCAGCGGCTGTGGCGAGGAACGATCGTGGCC
GGCGTGAGGATGCGATTCCTTGGGCATGCCCCAAGTGCACGCTTGTCAAC
GACGGAAACGCTGTAAGCTGCGGGGTGTGCCAGGCGAAACCACCCTTGGC
AACTTGGCACAAAGCAACGGCGGCGGCAACCAGCGCAGACCGAGGGAGAC
AAGGGGTCACCGCCGGCGATGGGTGGACTACCGCGCGGACAGGTTTTGTC
GAGGCCGCGGCGGAGTTTTCGAGCGGGGGCGTCCGGGGACGATCGACCTT
CGGAGGGAGCGAAGCAACGGCGATGGCGACCAGCGGCGCGAGGTCAGGCG
TGAGGCCCCGCGACGACGCTTTTCGGGTGTGCCGAATGTGCACCCTCCGA
AACCTCTCGGAGGCATCAGAATGCGCCGCTTGCGGAATTCCCTTCGCAGA
GAGTGAAGCTGCTGCTGCTTCGATAGGAGGGTCGTCTGAGGCAGAGGTGT
GGGTGATGGACGAGGAGGAGGCGGGCGGGAATCGTCGTGGGGCAGCAGCA
GCAGCAGCAGCACGGAACGAGCCTGAATACATCGACCTATCCTGAGAGCC
CGGCCACTTGAAGTCGTGGCCCTTTCACACCCTTGGTCTCACAACGTGTG
GCAAGGTTGCTGAAACACCACCGATGAAAAGGATCCAGATGTGCACCCAA
CCACGCCCCGCGAAGAGCTAGCCTTAACTGAAGAGCTAGACTTAACTGAA
GTGCTTTTGGTGTGCGCAAGCAGAAAGAGCACTTTGCTGATGCAGCCACT
TCCGTGCGCCATGCCCTTGAATAGACACGCGTGCCCGTGAAGCCCGATGC
TGCTTCATTAGCATGGGTGCCGCATGCCGTAGGCGTTCATCTTTTCTTCG
TCAATTTTGTGCTTTGGTAAAATTGTCGGCAACCGATTATTATCTGCATG
TGTTCGGTGTCAAAAAGAGGTGTCGTCAACTCGAGATTCATGCCTTGGGG
GGGGGGTTGCAGTCCCGTGCTTGGACGTTAGTCACCTCATGAGTTGTGGA
TCCGAGGCACGTTATTGAGCACCGAGTCGGTATCACGTGTGAGCCTTGTG
TTGGCGTTGTTGGGGTTTCGACTTTGGAGGCGCTGAACGTCGATAGTGGC
AATGCACGTGACTGCGTTTTGCGAGGTACCGGCATACGCACCCAGGTAAC
CTTCAATCCCTTTGTAAATGAAAAGGTGCAAAGGTCCGTCTTCTACCTTC
CCTCCTTCCCTCGTGTGTTCGGATGCGCATGGTTGGGCGGTGCTCCAACC
CATTTGCATCAGTCCCCCGATGGACCTGTTTAATTTTATATCGGCGCCGT
TCTTATTACCCTGCCCACTCGCGATACAGTAAGTAGCAGATTTCGAGAGA
AAACTTAAAAACACCGTAAGAACACCTCCTGAGGTACGTCGTGTGAGGCA
TTGCTCGAGGCTTCTGTTGAGTTAAAACAGTGAGGGTTCATCGGTGGGGA
CAAAAGTATGAAGGACAGAGTTTGTGTGTAACTTACCGCAATTGTATGGA
ATACAAAATACCAAGTACTTGGAAATTGGGGTGTATTAATGACGTATCAC
GAATAGTAAGATGTTATCCGTGTTAGATACTGGAGGTTGATGACAATTAT
GTATGTATTATAAGATCAACTATCCCAAAGTGTACGGTTAGGCTACCATC
GGAAATATGGTGAAATCTGCTTATGCGCGTGGCTCAACGGGCAGCTTTCG
TTTTGTCGATACGGCGTCTCTGGTGCGAAGCTGTGTAGAACTAGCATGTT
CCTCCACACGAGACTTGCCAGAAGTTGTTGTCAAGACAGGGATGGATGGA
TGGATCCAACAATTTTGCTTCATTTCCATAGCCCTACATGCTGATGCTGA
TGCGGCTGGAACCCTGCTTCGGGTGGTACCCTCTGACGTATGCATTTCCA
TGAACCAGACTACATGGCAAGCTTGCTTGGTGTTATCGTCTTTGGAGCGC
ATCTTGCGCCTTTATTCGCGCCGGCGACGTTGTTGGAATGCCCGTTCTGC
CGTTTAAAATGTTCTCTGCAGGCTTGGCCGTGTGAGGTTAGGTTCTTCAG
TGGATCTGTTAGCATCCGCCGTCCTCTATGTAGTAGAGTGGAGAGGGGGG
AAGCTGATGTGCATGACGACGGCTAGGGGCGCCCGCGACACGGGCCACCG
ACACGTCTCAAATTTCAGAGTGTGCACCCCTCTAATACTGAGAAGATGTT
TTCTGACGCGGCTAGCCCAGCCCGCCTCGAGAGATAAAGTGGCAGTCGGT
CTGGAAACCCTCGTGGTCCACGCTGATCAGGCAGCTTCATATGTCAAAAA
GGCGTTATATGGTGCTTGTAGTCAGGGAGCTCACACACACTACGCCCATC
CTCACTACACTTGGCGGAGCTTTCGCACGAAACATTTGTCGTACGCGGGC
ATGGCTGATGCGGAACTTGGCCATTGAAGCCTGCTTACAGACTGCATCAC
CCACGTATCGAGATGCCGCTAGGAACGCGACCAAATCAAGAAGGGTCCTG
CTCGATAAGCCCTTCGAGAATCTTTCAGCTTGTCACACCTGCGTTGGTCT
TTCCACACAACCGCTTTGCCAGTCGAATAGCAGCTGTATCGGCCGCTGAT
TCGAAGCAAGCAAAAACATCTGCTCCTTCTGTCGTTGTACCACGGAACAA
CTCATTTCGCACTGCACGGATCGAATCGCCCCCAGCGCCCTTCTAGTGTG
GAGCGAAGATTTTTCAGGCGTCCATAACCGTACAGGGGTACTCGTCGACC
CGCGTGGCTGCGCAATCGGCCGCCGTGCGTCTCGGTTAATCAATTTCTCT
TCGAAAAAGCCAGTCGACGGTTGGGCTCCAGACTGTTCAAATAAATCCCA
CCATCGATCGGACTTGCCTGCTGGTTGGGATCCATTCGCCAAAAAAGTCC
GCTACTGCTGCCGTGTAGGTAGTGCAGGGGCTACGCAGGGCTGGCTACAG
CTGCACGATGTCACAGCCGGCCACGCCCGAAAAAAGGAGAAGAAAAAACG
AGCAGGACGAAAACGCCCGTCGGGCAGCAATGCGCTCCGCGATACCTCAC
GCACGACAACACAACAGTCCTCCTGTGATACGCCAACCTCCGTTTCACTT
CACCACCTCACTTCACCACCACAGAAACCTAGAGGACAGACGCTGCCGAA
CCCATCGGTATCGGTAGAGACTTTGCTCACACACGCATGGCTCATCGACA
CGGCAGGGGCGACGCCATGCGTACGTTGCCGTTTCGTTTCAAGGGAGAGA
TCGCTTCAGGCGCAGCGCCAAGTCCCTCGTTTTCACCGGCCACGCAGCCA
TCTGGCAACCATAAAGCCGTTACGTCGGCGCCGGGCGCTCGGCGCCGCAA
CCTGTCGACATTTTCGCGTCCACCAAACCGAGCAACGCAGGCCGCCCATC
AAAGCAAGTGCTCCCACCAATCACCAATCGAGACACTTGCTTCGGCTAGC
CAACCCCCCTCCCCTGAGGAATTACGGCTATTTCCAAGCGAACAAGATGC
GGTCGCGTGCTGCATATTGGTGGGTCCAGCCCAATCTCGGGGACGAGCTG
TCGGCTCTACATGCATCCATTCCAACCATCAATGTTGCGCCCTTCCTCGC
TCTGTTTCTTCGTTTTTTCGGACAAAAAGAGGTACAATGAACTATCGTGG
GAATCAGAACGGTGACGGCCTCGGCGTCAAGGATAGGCAATCTCCAAGAA
AAGCTTGGGCGGGGTCAAGGGGAGGAAGGTGTACCTCGTCCCCGCGACAA
CATGCGTCGGCACTGGAACGTGAAAAACGCAAGAGGCAAACACTGCGGAA
CCTACCTACCGGCCTCTGTGTAAATCTCACAATGCGGCGTGATTCAGTGA
CCCGTCCGGCTGGCAAGAAGAATTGCAAGAAGAATTGGACAGGTTGGGTC
ATCGAAGGGTTTGGCGTTTGACCTGGCGAAACGCAACTTCTCCTGGCACA
CATTTACTCCCTTGCTGCGACTTGGTCACTTGCGGCGATGCCCTGATTTC
CTGGCGTGCGCTCAACAACTACTGCAAGAACGCGTAAAATGACTGAGCAA
AGACGGCAGAAGGGACTCGACAAACGCTATCCTCTTAACAAGACACTTTC
ACCAATTCGTCAGGTGGAAAAAGAGGAAGGTAAGTTTCGAAGCCTTGCCA
TACTGCAGGTGAGAGTTCCGGATCATTCCCCCACGTCCCGGCCCACGACT
TTAAT back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig106:27417..37321+ >mRNA_H-canaliculatus_F_contig106.581.1 ID=mRNA_H-canaliculatus_F_contig106.581.1|Name=mRNA_H-canaliculatus_F_contig106.581.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3558bp|location=Sequence derived from alignment at H-canaliculatus_F_contig106:27417..37321+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCCGGGAGTACATGACTTGTGGGGCATCTGGGAAGTCAAGGAGGTCAA
CGGTCGGCCTCGGCAAACGGAAGCTAGAGAGCTGCTACAGAGGTTGGCCG
ATCAGATGCCGGGAGTACATGACTTGTGGGGCATCTGGGAAGTCAAGGAG
GTCAACGGTCGGCCTCGGCAAACGGAAGCTAGAGAGCTGCTACAGAGGTT
GGCCGATCAGGTGATGCCGATCTGCGTTGCCCACCAGTGGAAGGTGCCGC
TGCTGCTGGAGTTCGTGCCCAAGGAAGCTGGGCTCCTCGGCATGAACGTG
AACCGCGGCCAAAAAATCTGCATCCGGTTGCGCCCGGCCTCCGACGAAGG
TGATGCCGATCTGCGTTGCCCACCAGTGGAAGGTGCCGCTGCTGCTGGAG
TTCGTGCCCAAGGAAGCTGGGCTCCTCGGCATGAACGTGAACCGCGGCCA
AAAAATCTGCATCCGGTTGCGCCCGGCCTCCGACGAAGGCAACTTTTACC
CGTACGAGAACTTGCTAGGGACGATGCTTCACGAGCTGGTCCACATGGAG
ATCGGGCCTCACAGCGCGAAGTTCTACAAGATGCTGGATCAGCTCACCGA
TGAGTGTGACAAGCTCATCCGTGAAGGCAACTTTTACCCGTACGAGAACT
TGCTAGGGACGATGCTTCACGAGCTGGTCCACATGGAGATCGGGCCTCAC
AGCGCGAAGTTCTACAAGATGCTGGATCAGCTCACCGATGAGTGTGACAA
GCTCATCCGTGAAGGCATCACCGGTCGGAATATGCCGTTTGCAGGAGAAG
GGCAGTCTCTAGGAGGCGTGCGAGGTCCGGCCGATGCTCGAGCCGCGGCG
CTGAAGGCATCACCGGTCGGAATATGCCGTTTGCAGGAGAAGGGCAGTCT
CTAGGAGGCGTGCGAGGTCCGGCCGATGCTCGAGCCGCGGCGCTGAAGGC
AGCGGAGAAACGACAGCGGCAACAGGGGGTTATGGCAGGCGGGGGGCAGC
GGCTGGGTGGTCTGTCGGGCGCGTTATCAGCGTCGGATTCAGTGTCTCCA
GCGCAACGTGCCGCAGCTGCCGCGCATTGGCAGCGGAGAAACGACAGCGG
CAACAGGGGGTTATGGCAGGCGGGGGGCAGCGGCTGGGTGGTCTGTCGGG
CGCGTTATCAGCGTCGGATTCAGTGTCTCCAGCGCAACGTGCCGCAGCTG
CCGCGCATTGGAGGGCCGCCGTCAGCAAAGGGTGCGGAGGCCACCGCCAT
GGCTCCGCCGCGGGGCAGACAGCAGGTAATTCCGCCGCCGTCACCGGCGA
CCTGGGCGGCTGGGAGTGCGGGCTCTGCACCCTGATCAACGCCTTCACTA
TCAGCGCATGCGACGCTTGTGGAACCGAGCGATCTGCGGCTACCGCTGGT
GCTTCCATCGGCGGTGGCAATGGTGGCGGTGGCACCAACGGCGTCGCAAC
CGGCCGCGAAAAGCGGCCCACCCCAGCAACAGGAGCGGTGTCCAGGGTTG
CAGGCCCCCTGAAAACGGCAAGCACCCGGTCGGTCAAAGGTAGCCACTCT
GTGAGGCCCTCCGGCAGTGTCGGCGGTGGGCACAGTAGAGGCGGCGGCGC
CGGCGGTGCCCCGTCGAAGGCCACCTGGACTTGCCGGCAGTGCCCGTTCA
ACTTTCCAAACGGGGCGGAGAGACAAACGTGCGAGTCATGCGGGGCGGCG
CGGGGCGTGACCGAGGCTGCAAGCGGCGGCGGCGGTAGCGGCAGCGATAA
AGGCGCTAGCAGCGCCGGGGCGACGAGGAGTGGGGCAGCGGCGGCGGCGG
CGGCGGCAGCAGCGGCTGTGGCGAGGAACGATCGTGGCCGGCGTGAGGAT
GCGATTCCTTGGGCATGCCCCAAGTGCACGCTTGTCAACGACGGAAACGC
TGTAAGCTGCGGGGTGTGCCAGGCGAAACCACCCTTGGCAACTTGGCACA
AAGCAACGGCGGCGGCAACCAGCGCAGACCGAGGGAGACAAGGGGTCACC
GCCGGCGATGGGTGGACTACCGCGCGGACAGGTTTTGTCGAGGCCGCGGC
GGAGTTTTCGAGCGGGGGCGTCCGGGGACGATCGACCTTCGGAGGGAGCG
AAGCAACGGCGATGGCGACCAGCGGCGCGAGGTCAGGCGTGAGGCCCCGC
GACGACGCTTTTCGGGTGTGCCGAATGTGCACCCTCCGAAACCTCTCGGA
GGCATCAGAATGCGCCGCTTGCGGAATTCCCTTCGCAGAGAGTGAAGCTG
CTGCTGCTTCGATAGGAGGGTCGTCTGAGGCAGAGGTGTGGGTGATGGAC
GAGGAGGAGGCGGGCGGGAATCGTCGTGGGGCAGCAGCAGCAGCAGCAGC
ACGGAACGAGCCTGAATACATCGACCTATCCTGAGAGGGCCGCCGTCAGC
AAAGGGTGCGGAGGCCACCGCCATGGCTCCGCCGCGGGGCAGACAGCAGG
TAATTCCGCCGCCGTCACCGGCGACCTGGGCGGCTGGGAGTGCGGGCTCT
GCACCCTGATCAACGCCTTCACTATCAGCGCATGCGACGCTTGTGGAACC
GAGCGATCTGCGGCTACCGCTGGTGCTTCCATCGGCGGTGGCAATGGTGG
CGGTGGCACCAACGGCGTCGCAACCGGCCGCGAAAAGCGGCCCACCCCAG
CAACAGGAGCGGTGTCCAGGGTTGCAGGCCCCCTGAAAACGGCAAGCACC
CGGTCGGTCAAAGGTAGCCACTCTGTGAGGCCCTCCGGCAGTGTCGGCGG
TGGGCACAGTAGAGGCGGCGGCGCCGGCGGTGCCCCGTCGAAGGCCACCT
GGACTTGCCGGCAGTGCCCGTTCAACTTTCCAAACGGGGCGGAGAGACAA
ACGTGCGAGTCATGCGGGGCGGCGCGGGGCGTGACCGAGGCTGCAAGCGG
CGGCGGCGGTAGCGGCAGCGATAAAGGCGCTAGCAGCGCCGGGGCGACGA
GGAGTGGGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGCTGTGGCGAGG
AACGATCGTGGCCGGCGTGAGGATGCGATTCCTTGGGCATGCCCCAAGTG
CACGCTTGTCAACGACGGAAACGCTGTAAGCTGCGGGGTGTGCCAGGCGA
AACCACCCTTGGCAACTTGGCACAAAGCAACGGCGGCGGCAACCAGCGCA
GACCGAGGGAGACAAGGGGTCACCGCCGGCGATGGGTGGACTACCGCGCG
GACAGGTTTTGTCGAGGCCGCGGCGGAGTTTTCGAGCGGGGGCGTCCGGG
GACGATCGACCTTCGGAGGGAGCGAAGCAACGGCGATGGCGACCAGCGGC
GCGAGGTCAGGCGTGAGGCCCCGCGACGACGCTTTTCGGGTGTGCCGAAT
GTGCACCCTCCGAAACCTCTCGGAGGCATCAGAATGCGCCGCTTGCGGAA
TTCCCTTCGCAGAGAGTGAAGCTGCTGCTGCTTCGATAGGAGGGTCGTCT
GAGGCAGAGGTGTGGGTGATGGACGAGGAGGAGGCGGGCGGGAATCGTCG
TGGGGCAGCAGCAGCAGCAGCAGCACGGAACGAGCCTGAATACATCGACC
TATCCTGA back to top
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