mRNA_H-canaliculatus_F_contig106.578.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A6H5L3V5_9PHAE (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3V5_9PHAE) HSP 1 Score: 648 bits (1671), Expect = 3.470e-225 Identity = 356/478 (74.48%), Postives = 394/478 (82.43%), Query Frame = 1 Query: 187 GANTNPIAFFVPPTLSSMMA-LMRRPPVRCQALADSILASRGLATMTQRDIAATRQCGDIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDGAVDAESIPRREEEPEGWGQGRDGDGA-------RKRKPDSVQHTPAHGFFQRQKDKLLRAIEVGETLSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVRAIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASVSTMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAPRSGASNTSTXXXXXXXXXXXXXXXXXXXXVAR----------------RGKRYWGRQVVKPPAVADVGAGSEVTLDVIAPDPFVFVEGELQL 1548 G N N +A + SMMA LMRR P+RCQALAD+++A RGL+ MT R++AA+RQCGDIPTETL LDDDFVVINKPADVRMDGNFDVAVDKLIR+WCPTLE KELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRA+K+YLAVV GAVD ES+PRREEEP+GW +GRDG+G RKR+PDSVQHTPAHGFFQR+KD LLRAIE+GETLS +D+AFSKLSWGDIKFDKAAS PFHSAAKAD++RA+A AEAA+F+AAQGAPDRGVFRAP DG GE RVDASVS +PGDFRMRLD+ AGGKGKPS+TFV+VLE GSYRGR VTKVL RPHTGRRHQLRLHALHMGHPILGDTTYG+ADHTIPRMCLHAQSL L+LAP S A+ + T XXXXXXXXXXX RGKRYWGRQ V+P V G EV LDV+APDPFVFV+GELQL Sbjct: 17 GNNVNAVALV---SSGSMMASLMRRSPIRCQALADTVMAQRGLS-MTSRELAASRQCGDIPTETLSLDDDFVVINKPADVRMDGNFDVAVDKLIRYWCPTLEDKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRAKKSYLAVVQGAVDPESVPRREEEPDGWREGRDGNGXXXXXXXXRKRRPDSVQHTPAHGFFQRKKDLLLRAIELGETLSPEDLAFSKLSWGDIKFDKAASRPFHSAAKADKIRAVAEAEAARFQAAQGAPDRGVFRAPGDGDGELRVDASVSEVPGDFRMRLDEEAGGKGKPSRTFVKVLEHGSYRGRLVTKVLM-RPHTGRRHQLRLHALHMGHPILGDTTYGDADHTIPRMCLHAQSLTLRLAPPSDAACSDTEAPAKQESGXXXXXXXXXXXXXXXXXXXXXXXXGGMGGGRGKRYWGRQKVQPARVT--GGKQEVILDVVAPDPFVFVDGELQL 487
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: W2Q6J3_PHYPN (PseudoU_synth_2 domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2Q6J3_PHYPN) HSP 1 Score: 154 bits (390), Expect = 1.610e-36 Identity = 128/360 (35.56%), Postives = 172/360 (47.78%), Query Frame = 1 Query: 376 LFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDG--------AVDAESIPRRE-------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRAI------EVGET--------LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVRAIAAAEA----AKFEAAQGAPDRGVFRAPSDGPGEFRVDASV---STMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 L D+ FVV+NK D RMDG FDV ++K + P +E + +W+HQLDFATSGVL V ++EA A GC FRE++ +K YLAVV G +VD +P + EE E + G A ++ P +H P F ++ +LLR EV T L+ ++AF+K++W D+ K + AKAD+ R + K A+ + R S+ P + DA + G FRM + A K S T VL Y G VTKVL RP GRRHQLRLH H G PI GD TYG+ + PRM LHA + L+ P Sbjct: 98 LSKDEHFVVLNKGPDERMDGAFDVTLEKALARDFPQVE--KFRWIHQLDFATSGVLVVGANKEATATGCRLFREKQVQKEYLAVVQGHLPFNPADSVDTAGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGYPRGARHGP--NLFTMEQARLLRESQGDSRGEVRGTSNGAGTRELTPAELAFTKMTWHDLT--KEEKDAYTEKAKADKQRFLKELSEFLSQEKVRLARKRNYESLDREDSEEPVAYIFDAPIIEPHRSTGVFRMLVGTEADAAAKQSTTICFVLGHAMYEGEPVTKVLL-RPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 450
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A8K1CQW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW5_PYTOL) HSP 1 Score: 153 bits (387), Expect = 2.450e-36 Identity = 124/353 (35.13%), Postives = 174/353 (49.29%), Query Frame = 1 Query: 397 VVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDGAV-----DAESIPRRE-----------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRAIEVGET-LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVRAIAAAEAAKF-------EAAQGAPDRGVFRAPSDGPGEFRVDASVSTMP------GDFRMRLDDRAGGK-----GKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAPR 1323 VV+NK D R+DG FD ++K + P ++ + +W+HQLDFATSGV+CV L +EA A C FRE+R +K YLAVV G + + S+P EE + R G +++PD V+ PA FFQ ++ LLR + L+A++ W D+ ++ + + + D+VR + E +F AAQ D + ++ E A V P FRMR+ DR + GK S T VL G+Y+ +TKVL RP TGRRHQLRLH H G PI+GD TYG+ + T PRM LHA L L +P+ Sbjct: 86 VVLNKREDHRLDGAFDATIEKALHRDFPDVD--KFRWIHQLDFATSGVMCVGLEKEATAMACRLFREKRVQKEYLAVVRGHLPFHPRELTSLPEGHRVRACTFSKLGLLIQDTEEFDRLKTQRKGTATHQKRPDYPRGVRQAPA--FFQIERSALLREQQNNSRELTAEEAQLVAAKWKDLTSEQ--QNRYQTMSNEDKVRYMK--ELVRFLDEERERVAAQRRYDVSYAQERNEPTEEEEPVAYVFDDPIAEPGRDTFRMRIGDRTNVEDPTVAGKASATIAFVLGHGTYQDEPMTKVLL-RPLTGRRHQLRLHLAHNGFPIVGDATYGSENETAPRMMLHAWRLWLMASPK 429
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A833WT58_PHYIN (RNA pseudouridylate synthase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WT58_PHYIN) HSP 1 Score: 149 bits (377), Expect = 9.630e-35 Identity = 130/374 (34.76%), Postives = 178/374 (47.59%), Query Frame = 1 Query: 376 LFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDF------ATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDG--------AVDAESIPRRE-------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRAIEV---GET-----------LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVR------------AIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASV---STMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 L D+ FVV+NK DVRMDG FDV ++K + P +E + +W+HQLDF ATSGVL V ++++A A GC FRE++ +K YLAVV G +VD ++P + EE E + G A ++ P V+H P F ++ +LLR + GE L+ ++AF+K++W D+ K G + AKAD+ R I A K+E+ G ++ P + DA V G FRM + K S T VL Y+G VTKVL RP GRRHQLRLH H G PI GD TYG+ + PRM LHA + L+ P Sbjct: 98 LSRDEHFVVLNKGPDVRMDGAFDVTLEKALARDFPQVE--KFRWIHQLDFVMTELAATSGVLVVGVNKDATATGCRLFREKQVQKEYLAVVRGHLPFNPAESVDTAALPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKTPGYPRGVRHGP--NLFTMEQAQLLRKSQEHPRGEVRGSSNRAEARELTPAELAFTKMTWHDLT--KEEKGAYTEKAKADKRRFLKEFSEFLNQEKIRLARKRKYESFDGEDSE-----EANEPVAYVFDAPVIEPHRSTGVFRMLVGTETDTAAKQSTTMCFVLGHAIYKGEPVTKVLL-RPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 459
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A0P1AWK8_PLAHL (Rna pseudouridylate synthase-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWK8_PLAHL) HSP 1 Score: 146 bits (368), Expect = 3.030e-34 Identity = 121/350 (34.57%), Postives = 169/350 (48.29%), Query Frame = 1 Query: 358 DIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDG--------AVDAESIPRREEEPEGWGQGRDGDGARKRKPDSVQHTPAHGFFQRQKDKLLRAIEVGET---------LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVR------------AIAAAEAAKFEAAQGAPDRGVFRAPS----DGPGEFRVDASVSTMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQL 1308 D+ L + +FVV+NK D R+DG FDV ++K + P ++ + +W+HQLDFATSGVL V +++EA A GC FRE++ +K YLAV+ G D E + R + G + + G P +H P F ++ +LLR + E L+ ++AF+K++W D+ K + AK D+ R I A K+++ G DRG P D P ++ ST G FRM + + K S T VL Y G VTKVL RP GRRHQLRLH G PI GD TYG+ + PRM LHA + L Sbjct: 36 DLQLHILSKNKNFVVLNKGPDERLDGAFDVTLEKALTRDFPHVD--KFRWIHQLDFATSGVLVVGVNKEATATGCRLFREKQVQKEYLAVIRGHLPFDPAKCTDMEELERFRNQQRGSRKHQKMPGY----PRGARHGP--NLFAMEQAQLLRDHHIRENSFIKTQTRALTPTELAFTKMTWHDLT--KEEKDTYLQRAKVDKERFLREFSEFLSQEKIRLAHERKYDSLNG-DDRGRCHEPVAYIFDSP---ILEPHEST--GVFRMLVGSKNDIMAKQSTTICFVLGHSMYNGEPVTKVLL-RPLNGRRHQLRLHLADHGFPIAGDVTYGSQEDEAPRMMLHAWRIWL 368
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A329SUS2_9STRA (PseudoU_synth_2 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SUS2_9STRA) HSP 1 Score: 145 bits (367), Expect = 8.440e-34 Identity = 125/368 (33.97%), Postives = 175/368 (47.55%), Query Frame = 1 Query: 376 LFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDG--------AVDAESIPRRE-------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLR---AIEVGET-----------LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVR------------AIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASV---STMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 L D+ FVV+ K D RMDG FDV ++K + P ++ + +W+HQLDFATSGVL V ++EA A GC FRE++ +K YLAVV G +VD++ +P + EE E + G A ++ P V+H P F ++ +LLR + GE L+ ++AF+K++W D+ K + AK D+ R + A K+E+ DR ++ P + DA + G FRM + K S T VL Y+G VTKVL RP GRRHQLRLH H G PI GD TYG+ + PRM LHA + L+ P Sbjct: 47 LSRDEHFVVLYKGPDERMDGAFDVTLEKALARDFPQVD--KFRWIHQLDFATSGVLAVGANKEATATGCRLFREKQVQKEYLAVVRGHLPFNPAESVDSDGVPAKACTFSKLGLLIQDMEEMERLRNQQRGSRAHQKMPGYPRGVRHGP--NLFTMEQAQLLRESQGVPRGEVRGTSAGAGARELTPAELAFTKMTWHDLT--KEEKDAYTEKAKEDKQRFLQEFSRFLSQEKVLLARKRKYESL----DREDSEEANE-PVAYIFDAPIIEPHRSTGVFRMLVGTETNTVAKQSTTICFVLGHAMYKGEPVTKVLL-RPLNGRRHQLRLHMAHHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRGRP 402
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A225VLR7_9STRA (Pseudouridine synthase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLR7_9STRA) HSP 1 Score: 144 bits (363), Expect = 3.120e-33 Identity = 125/371 (33.69%), Postives = 171/371 (46.09%), Query Frame = 1 Query: 331 DIAATRQCGDIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVD----------GAVDAESIPRRE-------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRAIEVGETLSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVR------------AIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASV---STMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 D + + L D+ FVV+NK D RMDG FDV ++K + P +E + +W+HQLDFATSGVL V +EA A GC FRE++ +K YLAVV +VD +P + EE E + G ++ P +H P F ++ +LLR + G+ S ++ F+K+SW D+ K + AKAD+ R + A K+E DR ++ P + DA + G FRM++ K S T VL Y G VTKVL RP GRRHQLRLH H G PI GD TYG+ + PRM LHA + L+ P Sbjct: 95 DRGGPKMLEQLKLRVLSKDEHFVVLNKGPDERMDGAFDVTLEKALARDFPEIE--KFRWIHQLDFATSGVLVVGATKEATATGCRLFREKQVQKEYLAVVRVRGHLPFNPANSVDKCGVPAKACTFSKLGLLIQDMEEMERLRNQQRGTRTHQKMPGYPRGARHGP--NLFTMEQARLLRESQ-GD--SRAELTFTKMSWHDLT--KEEKDAYTEKAKADKQRFLREFSEFLSQEKVRLARKRKYECL----DREDSEEANE-PVAYIFDAPIIEPHRSTGVFRMQVGTDTNTSAKQSTTIAFVLGHAVYEGEPVTKVLL-RPLNGRRHQLRLHLAHHGFPITGDVTYGSQEDEAPRMMLHAWRIWLRGRP 450
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A6A3NSK8_9STRA (PseudoU_synth_2 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NSK8_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.570e-30 Identity = 125/387 (32.30%), Postives = 172/387 (44.44%), Query Frame = 1 Query: 331 DIAATRQCGDIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDG--------AVDAESIPRRE-------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRAIEV---GET-----------LSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVR------------AIAAAEAAKFEAA-------QGAPDRGVFRAPSDGPGEFRVDASVSTMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 D R + L D FVV+NK D RMDG FDV ++K + P + + +W+HQLDFATSGVL V +EA A GC FRE++ +K YLAVV G +VD + + EE E + G ++ D +H P F ++ +LLR + GE L+ ++AF+K++W D+ ++ + AKAD+ R + A K+E + P +F AP ++ ST G FRM + K S T VL Y+G VTKVL RP GRRHQLRLH G PI GD TYG+ + PRM LHA + L+ P Sbjct: 65 DRGGPRTLEQLQLRVLVRDQHFVVLNKGPDERMDGAFDVTIEKALARDFPDVS--KFRWIHQLDFATSGVLVVGATKEATATGCRLFREKQVQKEYLAVVRGHLPFNPVDSVDRLGVIAKACTFSKLGLLIQDMEEMERLRNQQRGTRTHQKMADYPRGARHGP--NLFTMEQAQLLRESQGDPRGEVRGAGAGAGARELTPAELAFTKMTWHDLTQEE--KDAYTERAKADKQRFLCEFSEFLSKEKVRLARKRKYECLDHEENEEKTEPVAYIFDAPI-------IEPHRST--GVFRMEVGTETNTTAKQSTTIAFVLGHAMYKGEPVTKVLL-RPLNGRRHQLRLHLARHGFPIAGDVTYGSQEDEAPRMMLHAWRIWLRSRP 435
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A484EHY7_BRELC (HMG box domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHY7_BRELC) HSP 1 Score: 134 bits (338), Expect = 4.810e-30 Identity = 121/375 (32.27%), Postives = 173/375 (46.13%), Query Frame = 1 Query: 349 QCGDIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDF-----ATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDGAVD---AESIPRRE---------------EEPEGWGQGRDGDGARKRKPD---SVQHTPAHGFFQRQKDKLLRA----------IEVGETLSADDVAFSKLSWGDIKFDKAASGPFHSAAKAD------------RVRAIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASVSTMPGD---FRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYGNADHTIPRMCLHAQSLQLQLAP 1320 + + L DDDFVV++K D RMDG FDV ++K + P ++ + +W+HQLDF ATSGVL V L +EA A C FRE++ +K YLA+V G + AES+ + E+ E + G A + P V+H P F ++ +LLR ++L+A+++AF++L+W + ++ F A AD R+ + A K+E+ V P + DA + FRM + + K S T VL Y G V+KVL RP GRRHQLRLH H G PI+GD TYG+ D PRM LHA + L +P Sbjct: 35 ELAQLQLRVLHKDDDFVVLDKGPDERMDGAFDVTLEKALARDFPHVD--KFRWIHQLDFVFACAATSGVLVVGLKKEATATACRLFREKQVQKEYLALVRGHLPLNPAESVNQSAHACTFSKLGLFIQDTEDLERMRNQQRGSKAHFKMPGYPRGVRHGP--NIFAMEQAELLRKSNKRLKEDNLCSKAKSLTAEELAFTQLTWHGLSNEE--KRLFSEKAIADKQRYAREFNEFLRLETLRLAHLHKYESLAADKSENVNE-----PLAYIFDAPIIEPHQSLKVFRMVVGKESNALAKQSTTLCFVLGHAIYDGEPVSKVLL-RPLNGRRHQLRLHLAHHGFPIVGDVTYGSQDDVAPRMMLHAWRIWLHGSP 397
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Match: A0A7S2RMN8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RMN8_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.440e-29 Identity = 97/299 (32.44%), Postives = 137/299 (45.82%), Query Frame = 1 Query: 358 DIPTETLFLDDDFVVINKPADVRMDGNFDVAVDKLIRHWCPTLEGKELKWVHQLDFATSGVLCVALHREAAARGCEAFRERRARKTYLAVVDGAVDAESIPRREEEPEGWGQGRDGDGARKRKPDSVQHTPAHGFFQRQKDKLLRAIEVGETLSADDVAFSKLSWGDIKFDKAASGPFHSAAKADRVRAIAAAEAAKFEAAQGAPDRGVFRAPSDGPGEFRVDASVSTMPGDFRMRLDDRAGGKGKPSKTFVQVLEQGSYRGRAVTKVLFSRPHTGRRHQLRLHALHMGHPILGDTTYG 1254 D+ + L + D++V+NKP D+R+DG+FDV ++K + L+ +++WVHQLDFATSG +C+ L+R A + F R+ RK YLA+V G +D R + G+ DD +S + DK + F ++G R + V ++S +P DFRMR+D +G+ +KT V VLE GS G VTKVL RP GRRHQLRLH LH+G+PILGD TYG Sbjct: 32 DLKVDILAENQDYLVVNKPCDLRLDGDFDVTLEKFVLGRVKGLD--KVRWVHQLDFATSGCICMGLNRRGAGNASKMFAGRKTRKYYLALVYGHLD------------------------------------------------RGLFAGK--GVDDYKYSTNTQAVRVEDKFENSDC-------------------FYTSEGGVVRDLLSDFGSSIPVLEVSGAISAIPDDFRMRIDPS---EGREAKTQVVVLEHGSLYGVDVTKVLL-RPIQGRRHQLRLHCLHLGYPILGDATYG 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig106.578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig106.578.1 >prot_H-canaliculatus_F_contig106.578.1 ID=prot_H-canaliculatus_F_contig106.578.1|Name=mRNA_H-canaliculatus_F_contig106.578.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=461bp MLTTASGANTNPIAFFVPPTLSSMMALMRRPPVRCQALADSILASRGLATback to top mRNA from alignment at H-canaliculatus_F_contig106:8725..14155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig106.578.1 ID=mRNA_H-canaliculatus_F_contig106.578.1|Name=mRNA_H-canaliculatus_F_contig106.578.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5431bp|location=Sequence derived from alignment at H-canaliculatus_F_contig106:8725..14155- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig106:8725..14155- >mRNA_H-canaliculatus_F_contig106.578.1 ID=mRNA_H-canaliculatus_F_contig106.578.1|Name=mRNA_H-canaliculatus_F_contig106.578.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2766bp|location=Sequence derived from alignment at H-canaliculatus_F_contig106:8725..14155- (Hapterophycus canaliculatus Oshoro5f female)back to top |