prot_H-canaliculatus_F_contig106.583.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig106.583.1
Unique Nameprot_H-canaliculatus_F_contig106.583.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length990
Homology
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BLAST of mRNA_H-canaliculatus_F_contig106.583.1 vs. uniprot
Match: D7FMC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC7_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 8.000e-35
Identity = 96/184 (52.17%), Postives = 106/184 (57.61%), Query Frame = 0 
Query:  185 MSMVSDIMTMLSRVPWTAHVEEAASTTKRELGELRSLMIAEKALAEERRYASGQTKRRSDGVAMFALASASIGLHCALDEFSELLRLGREVASCIHYCPGLARYQPHAYHAGLVILAAFGKRKEFEDLLGAAPAELRLSASSRRPLTFEAHSDTCSHPVCRKHAKAISEMGRRLRSEGAGPQTA 368
            MSMVSDIM MLSRV WTA VEEAA  TKREL EL+SL+ AEKAL EERR A+                         LD                        YQPHA+HA LVILAAFGKR EFE LL  AP ELRLS S+ RPLT++ H+DTCSH VCR+HAK I EM + L  E A   TA
Sbjct:    1 MSMVSDIMAMLSRVSWTARVEEAAQKTKRELSELQSLITAEKALVEERRSANW------------------------LD------------------------YQPHAFHAALVILAAFGKRPEFELLLAVAPRELRLSESTGRPLTYDEHADTCSHAVCRRHAKVIVEMSKGLAREEATVGTA 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig106.583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMC7_ECTSI8.000e-3552.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 5..48
e-value: 1.2E-5
score: 34.8
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 9..39
e-value: 7.3E-6
score: 26.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 10..37
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 10..39
score: 10.568
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 6..65
e-value: 6.6E-7
score: 31.2
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 7..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig106contigH-canaliculatus_F_contig106:42860..47824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig106.583.1mRNA_H-canaliculatus_F_contig106.583.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig106 42860..47824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig106.583.1 ID=prot_H-canaliculatus_F_contig106.583.1|Name=mRNA_H-canaliculatus_F_contig106.583.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=990bp
QARSGGRRRSCNRCSAKKERCDGQEPCQRCTRSGLECLYASCRTLGRPRN
ASPPPKRRSKAAAATGAGAGMGMASAAGATASSSRGGHGGRGAAAAKKGR
SGGSATAASRVAPRGGLDGQPTTHGAGGSGATGAAAASGGGGEVTALHDA
SRGSGNLRDIESASTCRPGLEAARERRRLRKADPMSMVSDIMTMLSRVPW
TAHVEEAASTTKRELGELRSLMIAEKALAEERRYASGQTKRRSDGVAMFA
LASASIGLHCALDEFSELLRLGREVASCIHYCPGLARYQPHAYHAGLVIL
AAFGKRKEFEDLLGAAPAELRLSASSRRPLTFEAHSDTCSHPVCRKHAKA
ISEMGRRLRSEGAGPQTATSSSVTVEEIDLEEEEKNRDPARGQAESHSLS
GKVSIQAAAAAPAGAGSPPPRWPGATQQEKFAGLVLRLPSPPESPGAPSP
YDESLPQQGPSSPAASAAAGPVEPVVDHDASATSEAKGVSPCQARKGEAS
VGAGGQRTWSPELASSWSTPPSASQDSSSPEKNASELSPTAAPLSSAASL
EESGEVFSSSSPLQAGPAFTHVRDRRLGALSAAATAMAATPAQPAAGRLD
RTRRVEGGRGGSGGPGSESLSGGTKRSRVATAAANGFAASGEGSDIASRA
RNAQGRTARRTNARKSGGNNTTGSSGSSGVHNAYLPYQLQQQGSNRAAPP
TNPVSAHQDDHSRAAPMMVMSQQPVPAPVAQAVAVDSSGVRALHAAAPAG
GTLTWRLWGTPRSSLAARNSGLASAGAGASLSSPSVQNNPHVASPGIPRP
WQWHGPVPPTSGFAPSAPSALSGSLLGGAPVVPPAAARAALFQGSTQQGL
SSSGVARLAGMGLAAPRPGMVGVSLPSSSFTTSGPSTAIAPAPAVSSRPT
LMTAGEASAAAISLAALAGAGASNQAGSTTAAAAAAAAAASPAAPAADAP
GTDVQEVSRCAGEGEAGEVEPHEEEMMALWEIIGTGDSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd