mRNA_H-canaliculatus_F_contig1059.570.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A6H5KLN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN8_9PHAE) HSP 1 Score: 953 bits (2464), Expect = 0.000e+0 Identity = 496/666 (74.47%), Postives = 549/666 (82.43%), Query Frame = 2
Query: 563 MSLNQQGEPEVADKTTQSRGHRRSESEASGAFIGIPR-----SFDSPRW-GGGTNKQRGSVGRYGWKTNDSNATTVVSVEDDRSPKLVSLADLIRNEDKVPATLLYDHPGDTDVTVDARDIGAGGVHNQAINGGAVGIQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHMRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARHLGGGNSGGARDSVLALLRDPPKKIPRSPTLVIATLTERSRLEPEDEVPTAEVRWRVPSQASLAPAVCGDIERFYVKTWCRGKGKDVIRTKTSTVDVPRRDFCRNQARQGIIDRGIALRKNLCLPQSQTTSIIIHGLQAGETYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDIPSPGTAGEGGVAQAQNQPRRGADKSATGVDQRRGPAKNFSVSWAQDDMAPAIGLRQSPSYHVGVDTDMSTEGDFGRSLPSTVRDWDSTYVSPATPARRRSQSYASSVTRADSFLQNSAGEQGFRSSFGGLGYSPPRTSL-VEEGVEGRPFSSDAAVRETSPTGRAAGDIGGGGGALTISTHR-GFEATESFQDEGCSVS 2536
MSLN QGEPEVA + T +R HRRSESEASGAF G PR S+DSPRW GGG NKQRGS GRYGW+ ND N S DD +P+LVSLADLIR EDKVPATLLY+HPGDTD +DARDI AGG+ +QA+NGGAVG+QEALQAAEHGNS+RLSKFLQDGGNPDTLSRLHH+RWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGY +CVSELLAAGADPN+TSSSLGYTPLMSAALTGSKECCWLLLRAGA+LDMRADDGRTA+DFAQKARHLGGG+SGG DSVL +LR+PPKKIPRSPT+VIATL ERS LEPE+EVP EVRWRVPSQASLAP +CGD+ERFY+KTWCRGKGK+VIRTKTST DVPRRDFCRNQ IIDRGIALRKNLCLPQSQTTS I+HGL+AG YSFTVSCVAE+EGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKD PS GT GEGG A Q RR ++S T +DQRRGPAK+FSVSWA+DD+AP I RQ SY V D +S GDFGRSL S +W+ + SP P RRRSQSYASS TRAD+FLQ S ++ R+S + + PP TS +EEG E RP D T GRA G++GGGG LT ST+ GFEA+E ++D GCSVS
Sbjct: 1 MSLNHQGEPEVAGRKTGNRAHRRSESEASGAFGGGPRPFSSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNNA---SPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGIHDSVLDVLREPPKKIPRSPTMVIATLAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTADVPRRDFCRNQ----IIDRGIALRKNLCLPQSQTTSAIVHGLRAGGVYSFTVSCVAEVEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDTPSSGTTGEGGAAP---QVRRVTNQSPTSIDQRRGPAKSFSVSWAKDDIAPTIDQRQPASYRVSDDVIVSPSGDFGRSLTSNASEWEPKHASPVVPLRRRSQSYASSATRADTFLQTSTADETIRAS---MAFPPPSTSSHLEEGTEARPLFGDM----TPHAGRAQGEMGGGGTPLTFSTNSSGFEASEFYEDGGCSVS 649
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: D7FV58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV58_ECTSI) HSP 1 Score: 630 bits (1624), Expect = 5.750e-216 Identity = 316/379 (83.38%), Postives = 342/379 (90.24%), Query Frame = 2
Query: 563 MSLNQQGEPEVADKTTQSRGHRRSESEASGAFIGIPR-----SFDSPRW-GGGTNKQRGSVGRYGWKTNDSNATTVVSVEDDRSPKLVSLADLIRNEDKVPATLLYDHPGDTDVTVDARDIGAGGVHNQAINGGAVGIQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHMRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARHLGGGNSGGARDSVLALLRDPPKKIPRSPTLVIATLTERSRLEPEDEVPTAEVRWRVPSQASLAPAVCGDIERFYVKTWCRGKGKDVIRTKTSTVDVPRRDFCRNQ 1681
MSLNQQGEPEVAD+ T +R HRRSESEASGAF G PR S+DSPRW GGG NKQRGS GRYGW+ ND N VS DD +P+LVSLADLIR EDKVPATLLY+HPGDTD +DARDI AGG+ +QA+NGGAVG+QEALQAAEHGNS+RLSKFLQDGGNPDTLSRLHH+RWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGY +CVSELLAAGADPN+TSSSLGYTPLMSAALTGSKECCWLLLRAGA+LDMRADDGRTA+DFAQKARHLGGG+SGG DSVL +LR+PPKKIPRSPTLVIA L ERS LEPE+EVP EVRWRVPSQASLAP +CGD+ERFY+KTWCRGKGK+VIRTKTSTVDVPRRDFCRNQ
Sbjct: 1 MSLNQQGEPEVADRKTGNRAHRRSESEASGAFGGGPRPFTSTSYDSPRWRGGGANKQRGSGGRYGWRANDGNN---VSPADDENPRLVSLADLIRKEDKVPATLLYEHPGDTDAPMDARDIEAGGLTHQAMNGGAVGMQEALQAAEHGNSVRLSKFLQDGGNPDTLSRLHHLRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYVTCVSELLAAGADPNITSSSLGYTPLMSAALTGSKECCWLLLRAGARLDMRADDGRTAFDFAQKARHLGGGSSGGTHDSVLDVLREPPKKIPRSPTLVIAALAERSSLEPEEEVPPVEVRWRVPSQASLAPTLCGDVERFYLKTWCRGKGKEVIRTKTSTVDVPRRDFCRNQ 376
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A835YST7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST7_9STRA) HSP 1 Score: 332 bits (852), Expect = 8.310e-96 Identity = 215/521 (41.27%), Postives = 266/521 (51.06%), Query Frame = 2
Query: 770 VVSVEDDRSPKLVSLADLIRNEDKV------PATLLYDHPGDTDVTVDARDIGAGGVHNQAINGGAVGIQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHMRWSLLHLAAG------------------------CSSMGGRLAFA--SHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARHLGGGNSGGARDSVLA--------------------------------------------------------------LLRDPPKKIPRSPTLVIATLTERSRLEPED-------------------------------------------EVPTAEVRWRVPSQASLAPAVCGDIERFYVKTWCRGKGKDVIRTKTSTVDVPRRDFCRNQARQGIIDRGIALRKNLCLPQSQTTSIIIHGLQAGETYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGML 1921
V SV + KL+SL+DLIR E+ PA LLY + G+ +D GG +A+N GAVG QEALQAAEHGNS L++FLQD G+P T SRLHHMRWSLLHLAAG C+ MG L+ A +HR RPEPDCNDGYA+C++ LLAAGADPN TS GYTPLM AA+TGS E CWLLLRAGA R G+TA DFAQ R G GA + L +L++PP+ +PRSP V+A L +RS ++ E EVRW +PSQASL PA CG ER+ VK W +G+ DV+RT T PRRDFC++ G +DRGIALR NL L +T S IIH L+ G YSFTVS +AE++GAL+ SPPS +SK + IP++K+D QW +GG+L
Sbjct: 174 VGSVGGSGTEKLMSLSDLIRREEGGRTRGGGPAPLLYSNEGEAGELLDGDGFDKGG-GRKAVNNGAVGTQEALQAAEHGNSALLARFLQDNGDPRTTSRLHHMRWSLLHLAAGFNXXXXXXXXXXXXXXXXXXXXXGCAGMGSALSLAGAAHRSRPEPDCNDGYAACIALLLAAGADPNATSIQGGYTPLMGAAVTGSAESCWLLLRAGANPLARTAAGQTALDFAQTPR---AGAPAGAHQAALKXXXXXXXXXXXXXXXXTALDFAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQNPPRLVPRSPLQVVARLADRSLVDEEPCRRCLXXXXXXXXXXXXXXXXEASHGFRLVTRSQEDDSQCVEXXXXXXEVRWLIPSQASLLPAHCGAAERYLVKCWSQGQASDVVRTNTGNSLKPRRDFCKH----GAMDRGIALRNNLSLQAPRTASTIIHNLRPGREYSFTVSLLAEVDGALQQSPPSAVSKTIYIPKTKDDAQWSVGGVL 686
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A7S2CTM4_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTM4_9STRA) HSP 1 Score: 308 bits (789), Expect = 1.100e-90 Identity = 168/334 (50.30%), Postives = 224/334 (67.07%), Query Frame = 2
Query: 944 GAVGIQEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHMRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARHLGGGNSGGARDSVLALLRDPPKKIPRSPTLVIATLTERSRLEPEDEVPTAEVRWRVPSQASLAPAVCGDIERFYVKTWCRGKGKDVIRTKTSTVDVPRRDFCRNQARQGIIDRGIALRKNLCLPQSQTTSIIIHGLQAGETYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDI 1945
GAV Q+AL+AAEHGNS L+ +L GG+P +SRLHHM WSLLHLA GC+ MGG ++R RPEPDC +G+A+CVS L+AAGADPNV S YTPLM A+L+G +CC LLL+AGA + A DG+TA D A ++R G VL +L +PP+ +PRSP V A L + E ED EVRW++P+ S+A CG+I+R+ V+T+ +G+ +V+ + RRDFC+NQ ++DRGIALR+NL LPQ +T S +IHGL G TY FTVSC+AE++G++R SPPS MSKPL IP S E+ +W +G +L V +I
Sbjct: 16 GAVSTQDALKAAEHGNSDVLAAYLHAGGDPMAVSRLHHMGWSLLHLATGCALMGG--ISNTYRTRPEPDCPNGFATCVSLLMAAGADPNVASKQGHYTPLMGASLSGDADCCRLLLQAGAIVKHMALDGQTALDAANRSRFADG------HMRVLQVLGNPPRLLPRSPLEVTARLLDY--YEGEDRERDVEVRWKIPTTTSMALVKCGEIQRYVVRTYVKGQELEVMHSAVGPGRRQRRDFCQNQ----VVDRGIALRQNLALPQPRTASTLIHGLIPGVTYHFTVSCIAEIDGSIRDSPPSLMSKPLDIP-SYEEEEWNIGEILDKVFAYNI 334
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A8J2SBP4_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SBP4_9STRA) HSP 1 Score: 144 bits (363), Expect = 6.600e-34 Identity = 93/212 (43.87%), Postives = 120/212 (56.60%), Query Frame = 2
Query: 959 QEALQAAEHGNSIRLSKFLQDGGNPDTLSRLHHMRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARHLGGGNSGGARDSVLALLRDPPKKIPRSPTLVIATLTERSRLEPEDEVPTAEVRWRVPSQASLAPAVCGDIERFYVK 1594
Q+AL+AAEHG++ L+ +L++GG+P SRLHHM WSLLHLAAGC+ GG A ++RRRPEPD G+A CV LLAAGA+P + PL A L G LLLRAGA + A RH + R+++ LL PPK +PRSP V A L+E + + V EVRWR P A P V G +ER+ V+
Sbjct: 50 QDALEAAEHGDARALAAYLENGGDPAATSRLHHMGWSLLHLAAGCALAGGPGAAQAYRRRPEPDAPGGFARCVELLLAAGAEP--ATGDERPAPLAGAVLCGDAASARLLLRAGAAAPTEVE--------APPGRH-----TAAEREAMRELLAAPPKLLPRSPLRVEAKLSEYVEGDARERV--VEVRWRPPPPA---PGV-GPVERYVVR 240
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A7S2XYK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK3_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.840e-25 Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 2
Query: 1568 GDIERFYVKTWCRGKGKDVIRTKTSTVDVPRRDFCRNQARQGIIDRGIALRKNLCLPQSQTTSIIIHGLQAGETYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMV-----------TGKDIPSPGTAGEGG 1975
G++ ++ VK W GK DVI T RRDFC+N G+++RGIALR+NL LP QT S I+H L G YSFTVS +AEL+G L SPPSCMS+ + IP ++ +W +G + M+ T K P G+ G G
Sbjct: 1 GEVIKYVVKCWGNGKMVDVIHATTGVGRGQRRDFCQN----GVMNRGIALRQNLNLPPPQTASTIVHNLMPGLHYSFTVSAIAELDGVLCESPPSCMSRVVQIPVRDKEDRWMMGEVFNMMSTPNPTGAPSSTSKHTPGGGSLGVNG 143
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A7S4D9X9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9X9_HETAK) HSP 1 Score: 87.0 bits (214), Expect = 3.780e-16 Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 2
Query: 1658 RRDFCRNQARQGIIDRGIALRKNLCLPQSQTTSIIIHGLQAGETYSFTVSCVAELEGALRHSPPSCMSKPLLIPESKEDHQWRLGGMLQMVTGKDIPSP 1954
RRDFC + ++DRG+ALR+NL LP S ++H L+ G YSFTVSCVA + G L SPPS +S+ + +P+++++ +W LG M KD P
Sbjct: 30 RRDFCEDT----VVDRGVALRRNLGLPPPPVASAVVHNLRPGAHYSFTVSCVAAVGGRLAESPPSVLSRVVAVPQAEKEDRWMLGMMAGGSGPKDKGGP 124
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Match: A0A7V8J0C7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V8J0C7_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 6.760e-5 Identity = 46/137 (33.58%), Postives = 63/137 (45.99%), Query Frame = 2
Query: 968 LQAAEHGNSIRLSKFLQDG----GNPDTLSRLHHMRWSLLHLAAGCSSMGGRLAFASHRRRPEPDCNDGYASCVSELLAAGADPNVTSSSLGYTPLMSAALTGSKECCWLLLRAGAKLDMRADDGRTAYDFAQKARH 1366
L AA +GN+ + L+ G GNPD LL AA S GR + L+AAGADPN GYTPLM+AA G+ +LL AGA ++ + +DG+TA + A+ +H
Sbjct: 622 LSAALYGNADVVEMLLKAGADARGNPD-----------LLVWAAYASRQSGRK--------------------LRLLIAAGADPNAPDRKRGYTPLMTAAQNGNVTGVEVLLAAGASVEGKNNDGKTALELARDGKH 727 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1059.570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1059.570.1 >prot_H-canaliculatus_F_contig1059.570.1 ID=prot_H-canaliculatus_F_contig1059.570.1|Name=mRNA_H-canaliculatus_F_contig1059.570.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=672bp MLPEGRREPPHIGMSLNQQGEPEVADKTTQSRGHRRSESEASGAFIGIPRback to top mRNA from alignment at H-canaliculatus_F_contig1059:18482..23499- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1059.570.1 ID=mRNA_H-canaliculatus_F_contig1059.570.1|Name=mRNA_H-canaliculatus_F_contig1059.570.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5018bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1059:18482..23499- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1059:18482..23499- >mRNA_H-canaliculatus_F_contig1059.570.1 ID=mRNA_H-canaliculatus_F_contig1059.570.1|Name=mRNA_H-canaliculatus_F_contig1059.570.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4032bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1059:18482..23499- (Hapterophycus canaliculatus Oshoro5f female)back to top |