mRNA_H-canaliculatus_F_contig10587.566.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A6H5K8A3_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8A3_9PHAE) HSP 1 Score: 347 bits (889), Expect = 4.180e-115 Identity = 182/257 (70.82%), Postives = 201/257 (78.21%), Query Frame = 1
Query: 40 MGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEG-GRARGRPLFVGRNRFDILVEVTPEAFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAV---GPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHGLFRR 798
MGP YALRWFTPGGEVDLCGHATLAAA ALWEEGRV G PIRFSTASGVLTCRRD EGW+AMDFP+E V D LP++DE R A+VQALGL+ A G G LFVGRNR D++VEVTPEAF+ + PDMR+LAAIESRG +VTCKG + EG S V G V+FQSRFFAPR+GI+EDPVTGSAHCCLAPYW SKLGR +VGYQASPRGGTVR TTV + EG+ RVVLEGKAV VF GLFRR
Sbjct: 199 MGPTYALRWFTPGGEVDLCGHATLAAAFALWEEGRVGPGLPIRFSTASGVLTCRRDAEGWVAMDFPSEVVSDALPEDDEGRRAIVQALGLASAGGGGEGEEGDGVLFVGRNRCDVMVEVTPEAFSAIAPDMRMLAAIESRGFIVTCKGQQLKKAGEEGISAAVDGVTDGGSVEFQSRFFAPRMGIDEDPVTGSAHCCLAPYWASKLGRC-MVGYQASPRGGTVR-TTVGLKSEGDG---RVVLEGKAVLVFRGLFRR 450
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A7C3FGI7_9CHLR (PhzF family phenazine biosynthesis protein n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3FGI7_9CHLR) HSP 1 Score: 213 bits (542), Expect = 3.350e-65 Identity = 119/247 (48.18%), Postives = 146/247 (59.11%), Query Frame = 1
Query: 52 YALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEV-TPEAFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGP-VDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
+ LRWFTP EVDLCGHATLA+AH LWE G + S P RF T SG+LT R + WI MDFPAE P ++ +++ALG G P++VGRNRFD LVE+ T EA LQPD L + +RG++VT + A P DF SRFFAP++G++EDPVTGSAHCCL PYWGS+LG+ + GYQAS RGG VR ER V+L G+AVTV G
Sbjct: 57 FELRWFTPTVEVDLCGHATLASAHVLWEAGYLKSAQPARFHTRSGLLTAERRGK-WIEMDFPAEPEQPTTPPDE-----LIEALG------------GSPVYVGRNRFDYLVELATEEAVRELQPDFSALRKVSTRGVIVTAR-----------------AASPGYDFVSRFFAPQVGVDEDPVTGSAHCCLGPYWGSRLGKEELTGYQASARGGIVRVQLAGER---------VILGGQAVTVLRG 259
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A6J4K7B2_9BACT (Phenazine biosynthesis protein PhzF like n=1 Tax=uncultured Gemmatimonadetes bacterium TaxID=203437 RepID=A0A6J4K7B2_9BACT) HSP 1 Score: 208 bits (529), Expect = 3.260e-63 Identity = 122/246 (49.59%), Postives = 145/246 (58.94%), Query Frame = 1
Query: 52 YALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVTPE-AFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
+ LRWFTP EVDLCGHATLA AH LWE G + + RF T SG+LT RR E WI +DFPA+ + D P V +ALG+ P+ VGR+ FD+LVE E LQPDM L A+E+RG++VT + EGA DF SRFFAPR+G+NEDPVTGSAHC LAPYW +KLGR +VG+QAS RGGTVR S DRV L G+AVTV G
Sbjct: 57 WRLRWFTPAVEVDLCGHATLATAHVLWEGGHLAADAQARFHTRSGLLTARRAGE-WIELDFPAKPLLDAPPPG-----GVAEALGVV------------PVQVGRSHFDVLVEAASEDEVRALQPDMGRLMAVEARGVIVTARAD-------EGAE--------YDFVSRFFAPRVGVNEDPVTGSAHCVLAPYWAAKLGRHELVGFQASRRGGTVRV---------RSAGDRVHLGGRAVTVLRG 260
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A3M1H1U7_9CHLR (PhzF family phenazine biosynthesis protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1H1U7_9CHLR) HSP 1 Score: 207 bits (528), Expect = 4.330e-63 Identity = 115/251 (45.82%), Postives = 146/251 (58.17%), Query Frame = 1
Query: 37 PMGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEV-TPEAFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
P G + LRWFTP EVDLCGHATLA+AH LWE G + RF T SG+LTCR+ + WI MDFPAE P A+V+ALG+ +P++ G+NR D LVE+ + E L+P+ LA + RG++VT + A GP DF SRFFAP +G+NEDPVTGSAHCCL PYW ++LG++ + YQASPRGG VR + DRV+L G+AVTV G
Sbjct: 52 PRGDGFNLRWFTPAAEVDLCGHATLASAHVLWERGYLPPDAAARFHTKSGLLTCRKQGD-WIEMDFPAEPAQPVDPPP-----ALVEALGV------------QPVYTGQNRMDFLVELDSEETVRQLRPNFSRLADLPCRGVIVTGR----------------AASGPYDFVSRFFAPNVGVNEDPVTGSAHCCLGPYWQTRLGKTEFLAYQASPRGGVVRV---------QIHGDRVILGGQAVTVLKG 259
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A2E7D6T9_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D6T9_9PLAN) HSP 1 Score: 207 bits (528), Expect = 6.250e-63 Identity = 122/250 (48.80%), Postives = 144/250 (57.60%), Query Frame = 1
Query: 40 MGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVTPE-AFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
G Y LRWFTP EVDLCGHATLA+AH L + G D PI F T SG+LT + G I MDFPAE DC P+ + +++ALG+ +P+ GRNRFD LVEV E A A L P+ LA I++RGI+VTC+ +S G DF SRFF P GI+EDPVTGSAHCCLAPYW +LGR S+ YQAS RGG VR V DRV L G A+TVF G
Sbjct: 67 QGNRYQLRWFTPAVEVDLCGHATLASAHILGKHGFADDSKPIEFYTRSGLLTTEVSD-GLIEMDFPAEPAADCDPEPE-----LLRALGIE-----------KPVNAGRNRFDWLVEVEDETALATLSPNFPELAKIKTRGIIVTCR-----------SSSPG-----YDFSSRFFGPAAGIDEDPVTGSAHCCLAPYWSERLGRESLTAYQASQRGGHVRTRVV---------GDRVKLAGPAITVFQG 274
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A1V9B8Q4_9BACI (Phenazine biosynthesis protein PhzF family n=1 Tax=Geobacillus sp. 46C-IIa TaxID=1963025 RepID=A0A1V9B8Q4_9BACI) HSP 1 Score: 206 bits (525), Expect = 1.570e-62 Identity = 122/247 (49.39%), Postives = 145/247 (58.70%), Query Frame = 1
Query: 52 YALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVTPEAFAV-LQPDMRLLAAIESRGILVT-CKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
Y LRWFTP EVDLCGHATLA+AH LWE G+ G I F T SGVLT ++ GWI +DFP+E P DE AV L+DA +PLF+GRNRFD LVEV E LQPD RLL +++RG++VT C GEA DF SR F P +G+ EDPVTGSAHCCL PYW +LG++++VG+Q S RGG VR T +R V LEGKAVTV G
Sbjct: 57 YRLRWFTPKAEVDLCGHATLASAHVLWERGQRRRGEAIAFFTNSGVLTAINND-GWIRLDFPSE-----APMLDESPPAV-----LTDA------LAAKPLFIGRNRFDYLVEVDSEQTVYELQPDFRLLQQVDARGVIVTSCSSAGEA-----------------DFVSRAFFPAIGVPEDPVTGSAHCCLGPYWADRLGKTTLVGHQVSSRGGIVRVTVAGKR---------VHLEGKAVTVLKG 260
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A838E0J0_9CHLR (PhzF family phenazine biosynthesis protein n=1 Tax=Ktedonobacteraceae bacterium TaxID=2740538 RepID=A0A838E0J0_9CHLR) HSP 1 Score: 206 bits (524), Expect = 2.090e-62 Identity = 114/246 (46.34%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 52 YALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEV-TPEAFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
+ LRWFTP EVDLCGHATLA+AH LWEE + +G RF T SG+LT R E WI M+FPA LP++ + +V+ LGL + + G++RFD LVEV + E +QP+ LA IE+RG++VT + + E DF SRFFAP +G+NEDPVTGSAHCCL+P+W KLGR+ +VGYQAS RGG VR DRV L G+AVTV G
Sbjct: 57 FDLRWFTPVVEVDLCGHATLASAHVLWEEDHLPAGEQARFHTRSGLLTAERQGE-WITMNFPAT-----LPEQADPPSGLVETLGLDPRSIQ---------YTGKSRFDYLVEVDSEETVRAIQPNFTRLATIEARGVIVTARAVTQGEQE-------------YDFVSRFFAPLVGVNEDPVTGSAHCCLSPFWSQKLGRNELVGYQASTRGGIVRVRLA---------GDRVYLSGQAVTVLRG 265
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A7K3Z0C7_9EURY (PhzF family phenazine biosynthesis protein n=1 Tax=Methanomicrobiales archaeon TaxID=2184052 RepID=A0A7K3Z0C7_9EURY) HSP 1 Score: 206 bits (523), Expect = 2.540e-62 Identity = 120/251 (47.81%), Postives = 147/251 (58.57%), Query Frame = 1
Query: 37 PMGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVT-PEAFAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
P G + LRWFTP E+DLCGHATLAAA L+E GRV P+ F TASG LT R+D E WI+MDFP+E + +P + +ALG+ PL+ GRNRFDILVE+ + L+PDM LA I +RGI+VT AS + A DF SRFFAP +G+ EDPVTGSAHCCLAPYWG KL ++ + G+Q S RGG+VR DRV+L G AV VF G
Sbjct: 52 PEGTGWKLRWFTPEHEIDLCGHATLAAAFVLYETGRVPENEPVVFDTASGKLTARKDGE-WISMDFPSEPPSESVP-----IPGLGEALGVM------------PLYTGRNRFDILVELPLADDVCSLEPDMDALAPIRTRGIIVTA------------ASDIPNA----DFVSRFFAPAVGVPEDPVTGSAHCCLAPYWGEKLKKTEMTGFQCSQRGGSVRVKLA---------GDRVILSGHAVHVFSG 259
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: UPI001C5CD650 (PhzF family phenazine biosynthesis protein n=1 Tax=Nonomuraea guangzhouensis TaxID=1291555 RepID=UPI001C5CD650) HSP 1 Score: 205 bits (522), Expect = 4.310e-62 Identity = 123/250 (49.20%), Postives = 146/250 (58.40%), Query Frame = 1
Query: 43 GPEYALRWFTPGGEVDLCGHATLAAAHALWE-EGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPAEEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVTPEA-FAVLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
G LRWFTPGGEVDLCGHAT+AAAH LWE EG DS +RF T SGVL R E G I +D PAE P+ E + ALG RP++ G+NRFD LVE+ EA A L+PD LAA RG++VT R G+ G DF SRFFAPR G+NEDPVTGSAHCCL P+WG++LGRS ++G+Q SPRGG VR T + DRV L+G+AV G
Sbjct: 54 GDGIGLRWFTPGGEVDLCGHATMAAAHVLWEREG--DSRARLRFRTRSGVLETERGEHG-IRLDLPAEP-----PEPIEEPAGLAAALGA------------RPIWTGQNRFDYLVELAEEAEVAALEPDFAALAAFPVRGVIVTA-----GRTSGD--------PGEHDFVSRFFAPRHGVNEDPVTGSAHCCLGPFWGARLGRSDLLGHQISPRGGHVRVTLL---------GDRVALDGRAVIFMSG 261
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Match: A0A2V7WCZ3_9BACT (Oxidoreductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7WCZ3_9BACT) HSP 1 Score: 205 bits (521), Expect = 4.920e-62 Identity = 117/253 (46.25%), Postives = 146/253 (57.71%), Query Frame = 1
Query: 37 PMGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDSGHPIRFSTASGVLTCRRDEEGWIAMDFPA--EEVGDCLPDEDEVRLAVVQALGLSDAEDEGGRARGRPLFVGRNRFDILVEVTPEAFA-VLQPDMRLLAAIESRGILVTCKGPGEARNEGEGASGVGTAVGPVDFQSRFFAPRLGINEDPVTGSAHCCLAPYWGSKLGRSSVVGYQASPRGGTVRATTVSERKEGESGSDRVVLEGKAVTVFHG 786
P G ++LRWFTP EV LCGHATLA+AHALWE+G + G RF T SG+LT R E WI +DFPA EE D P A++++LG+ +P++VGRNRFD LVEV EA L PD L + +RG++VT +G + G DF SRFFAP G++EDPVTGSAHCCL PYW ++LG+ + +QAS RGG VR DRV L G+AVTVF G
Sbjct: 50 PQGDGFSLRWFTPAVEVALCGHATLASAHALWEQGVLGLGQTARFHTKSGLLTATR-EGAWIELDFPATLEEAADPPP-------ALLESLGIE-----------KPVYVGRNRFDYLVEVESEAAVRALDPDHARLRTLPARGVIVTSRG----------------SNGKFDFVSRFFAPGSGVDEDPVTGSAHCCLTPYWSARLGKEEMTAFQASKRGGVVRVRLA---------GDRVKLGGQAVTVFRG 258 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10587.566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10587.566.1 >prot_H-canaliculatus_F_contig10587.566.1 ID=prot_H-canaliculatus_F_contig10587.566.1|Name=mRNA_H-canaliculatus_F_contig10587.566.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=267bp LPPPPPATGSSGPMGPEYALRWFTPGGEVDLCGHATLAAAHALWEEGRVDback to top mRNA from alignment at H-canaliculatus_F_contig10587:103..3312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10587.566.1 ID=mRNA_H-canaliculatus_F_contig10587.566.1|Name=mRNA_H-canaliculatus_F_contig10587.566.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3210bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10587:103..3312+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10587:103..3312+ >mRNA_H-canaliculatus_F_contig10587.566.1 ID=mRNA_H-canaliculatus_F_contig10587.566.1|Name=mRNA_H-canaliculatus_F_contig10587.566.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1602bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10587:103..3312+ (Hapterophycus canaliculatus Oshoro5f female)back to top |