mRNA_H-canaliculatus_F_contig1058.563.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: A0A6H5L6E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E2_9PHAE) HSP 1 Score: 268 bits (685), Expect = 2.280e-76 Identity = 143/317 (45.11%), Postives = 196/317 (61.83%), Query Frame = 3
Query: 603 QGDRPETMLIEPIDTPFKQREGEWEIVG--LSLTALGEPKSGTTWLGRIIVELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHADTDE--LFLHFNGDPKHVIPGL-GDAE--CMGRMRVHPNSFGGAYPCKGDSNV-SREKLLRCLPAVTPECVSHLLPLDPARRRIAVIFRDPRNLIISEHRMRRTVYHQI--VAELEP--FILERFAKVVAWIHQRYTWHT-TALQEISHVMFYEDLQMHPHHLADLAAFVGLNCTAKEADDVFQRHIYANPPGDYTTYGLSFKTLEWMNATMAETLPEAMLARYELTP 1514
Q D PE I+PID PF Q G W++ G +S+ A GEPKSGTTWLGR++ +L + LCGNA N WC MGGL + D PAP+Y FEM++ E LFLHF+G+ KH IPG+ G+ C R H N FG PC + +RE+L CL + CV ++ +DP RR VI RDPR++ +SE MR Y + + + P F +RF +V+W HQRY WHT T + SHV+FYEDL+ H H +A F+GL C+ ++A +V++ H P GDY+T+GL +T++WMN TMA LP ++ R+ +TP
Sbjct: 131 QPDLPEKSSIQPIDIPFLQEPGGWQLPGNGISMDATGEPKSGTTWLGRLVPDLALHLCGNANNSWCGMGGLAVLDNLPAPKYVFEMVNKTAGEGALFLHFDGNGKHYIPGMKGEPHPGCDNGGRPHENYFGDTPPCLDEEETPTRERLRACLFNTSALCVQYMASVDPDVRRSMVIIRDPRDVAMSEREMRIKYYREPAWIRKTTPDVFARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLACSEEDALEVWRAHRNPAPHGDYSTHGLQLETIQWMNETMARLLPPSLAFRWGVTP 447
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: D7FXT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT7_ECTSI) HSP 1 Score: 264 bits (675), Expect = 8.600e-76 Identity = 142/319 (44.51%), Postives = 195/319 (61.13%), Query Frame = 3
Query: 597 DTQGDRPETMLIEPIDTPFKQREGEWEIVG--LSLTALGEPKSGTTWLGRIIVELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHADTDE--LFLHFNGDPKHVIPGL-GDAE--CMGRMRVHPNSFGGAYPCKGDSNV-SREKLLRCLPAVTPECVSHLLPLDPARRRIAVIFRDPRNLIISEHRMRRTVYHQIV----AELEPFILERFAKVVAWIHQRYTWHT-TALQEISHVMFYEDLQMHPHHLADLAAFVGLNCTAKEADDVFQRHIYANPPGDYTTYGLSFKTLEWMNATMAETLPEAMLARYELTP 1514
D Q + PE I+ IDTP Q G W++ G +S+ A GEPKSGTTWLGR++ +L + LCGNA N WC MGGL + D PAP+Y FEM++ E LFLHF+G+ KH IPG+ G+ C R H N FG PC + + +RE+L CL + CV ++ +DP RR VI RDPR++ +SE MR Y A + F +RF +V+W HQRY WHT T + SHV+FYEDL+ H H +A F+GL C+ ++A +V++ H P GDY+T+GL +T++WMN TMA LP ++ R+ +TP
Sbjct: 63 DHQPELPEMSSIQLIDTPLLQEPGGWQLPGNGISMDATGEPKSGTTWLGRLVPDLALHLCGNANNSWCGMGGLVVLDNIPAPKYVFEMVNKTAGEGALFLHFDGNGKHYIPGMKGEPHPGCDNGGRPHENYFGDTPPCLDEEDTPTRERLRACLFNTSALCVQYMPSVDPDVRRSMVIIRDPRDVAMSEREMRMKYYRDPAWIRKATPDVFARKRFEILVSWTHQRYLWHTETVMAPSSHVVFYEDLKDHHHGFIGMADFMGLTCSEEDALEVWRAHRNPAPHGDYSTHGLKQETVQWMNETMARLLPPSLALRWGVTP 381
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: A0A6H5L183_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L183_9PHAE) HSP 1 Score: 254 bits (648), Expect = 7.910e-72 Identity = 133/309 (43.04%), Postives = 189/309 (61.17%), Query Frame = 3
Query: 630 IEPIDTPFKQREGEW--EIVGLSLTALGEPKSGTTWLGRIIVELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHADTD----ELFLHFNGDPKHVIPGLG---DAECMGRMRVHPNSFGGAYPCKGDSNVSREKLLRCLPAVTPECVSHLLPLDPARRRIAVIFRDPRNLIISEHRMRRTVYHQ----IVAELEPFILERFAKVVAWIHQRYTWHTTALQ-EISHVMFYEDLQMHPHHLADLAAFVGLNCTAKEADDVFQRHIYANPPGDYTTYGLSFKTLEWMNATMAETLPEAMLARYELTP 1514
I+P+ PFKQ+ E+ GLSL ALGEPKSGTTWLGR++ L ++LCG+ NPWC++GG+++ PPAP Y FE+L+ T LFLHF G KH+IPG+ +C R+H F PC + +RE+L CL T CV+++ DPA RR V+FRDPR+++ISE++MR V+H+ LE F+ +F +V+W+HQRY WHT L SHV FY++LQ P +A +GL C+ +A V++ H A+P G + T L T+++MNATMA LP ++ ++ LTP
Sbjct: 90 IKPVAIPFKQKPDEFGERGHGLSLVALGEPKSGTTWLGRMVPSLAIELCGSENNPWCQLGGVEVFPHPPAPSYEFELLNISTPTGRPRLFLHFQGRIKHIIPGMDLGIPLKCRNGGRLHKEGFMDLQPCDSGESPTRERLESCLWNTTKRCVNYMTSTDPAVRRSIVLFRDPRDVVISEYKMRTQVFHRDPWIASLSLEEFVQFKFEVLVSWLHQRYMWHTGDLMGPSSHVEFYDELQKSPVGFVGIARLMGLECSEDQAYKVWKAHKQASPNGGFATR-LGEATIQFMNATMARLLPPSVAIQWGLTP 397
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: A0A6H5JZR3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR3_9PHAE) HSP 1 Score: 224 bits (571), Expect = 1.860e-62 Identity = 117/279 (41.94%), Postives = 167/279 (59.86%), Query Frame = 3
Query: 717 SGTTWLGRIIVELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHAD-----TDELFLHFNGDPKHVIPGLG---DAECMGRMRVHPNSFGGAYPCKGDSNVSREKLLRCLPAVTPECVSHLLPLDPARRRIAVIFRDPRNLIISEHRMRRTVYHQI----VAELEPFILERFAKVVAWIHQRYTWHT-TALQEISHVMFYEDLQMHPHHLADLAAFVGLNCTAKEADDVFQRHIYANPPGDYTTYGLSFKTLEWMNATMAETLPEAMLARYELTP 1514
SGTTWLGR++ L ++LCG+ N WC++GG+ I PPA + FE+L + + ELFLHF G KH+IPG+ C R+H + F PC D +R++L+ CL + CV H+ DPA RR VI RDPRN++ISE+ MR V + L+ FI+ +F +V+WIHQRY WHT T + SH+ YE+LQ L D+A F+GL C+ ++A V+ + +P G Y + GLS +T+ +MNATMA LP A+ R+++TP
Sbjct: 17 SGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIGGSGSPELFLHFKGIHKHIIPGMDLGVPVSCRNGGRLHRDYFLDLQPCASDEMPTRDRLVSCLYDTSASCVRHMPSADPAVRRSIVIMRDPRNVVISEYMMRTQVIERERWTRTFSLDEFIMWKFEVLVSWIHQRYMWHTGTLMGPSSHITVYEELQRSHLGLIDIAGFMGLQCSEQQAAKVWIGRRHPSPSGGYASRGLSVETVSFMNATMARLLPPALALRWDVTP 295
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: A0A6H5JLX3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLX3_9PHAE) HSP 1 Score: 211 bits (537), Expect = 8.860e-58 Identity = 123/297 (41.41%), Postives = 166/297 (55.89%), Query Frame = 3
Query: 750 ELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHADTDE-----LFLHFNGDPKHVIPGL---GDAE-CMGRMRVHPNSFGGAYPCKGDSNVSREKLLRCLPAVTPECVSHLLPLDPARRRIAVIFRDPRNLIISEHRMRRTVYHQ---IVAELEPFILERFAKVVAWIHQRYTWHT-TALQEISHVMFYEDLQM-----------------------------HPHHLADLAAFVGLNCTAKEADDVFQRHIYANPPGDYTTYGLSFKTLEWMNATMAETLPEAMLARYELTP 1514
+L ++LCG++ N WC+MGGL + P+P Y FE+L T E LFLH+ G KHVIPG+ G E C R H N F PC +RE+L CL + C+ +P + RR AV+ RDPR++++SE RMRR YHQ + ++ FI +RF +V+W HQR+ WHT T L E SHVMFY+DLQ+ +P + DLAAF+GL C+ +A +V++ H A P GDYTT+GL T+EWMNATMA LP A+ + LTP
Sbjct: 3 QLALELCGSSTNTWCEMGGLAVYPSEPSPWYEFELLKRGTGEGSGPTLFLHYKGSNKHVIPGMSWKGHPEGCNQGGRRHRNFFEDYPPCISGPASTREQLTGCLWNTSSRCMG-FVPSES--RRTAVMLRDPRDVVLSEFRMRRDYYHQEEVMAISVDDFIWDRFQTIVSWTHQRWVWHTETVLSESSHVMFYDDLQIFSACCCISNLSAPVRGARRLFYTQSSLKANPMGMIDLAAFMGLECSEDQARNVWESHQNAIPHGDYTTHGLQLGTIEWMNATMASLLPTAVSLHWGLTP 296
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Match: D8LSW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW1_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.010e-33 Identity = 67/145 (46.21%), Postives = 88/145 (60.69%), Query Frame = 3
Query: 684 GLSLTALGEPKSGTTWLGRIIVELCVQLCGNAENPWCKMGGLKITDVPPAPRYSFEMLHADTD-----ELFLHFNGDPKHVIPGLG---DAECMGRMRVHPNSFGGAYPCKGDSNVSREKLLRCLPAVTPECVSHLLPLDPARRR 1094
G+SL ALGEPKSGTTWLGR++ L ++LCG+ N WC++GG+ I PPA + FE+L + D ELFLHF G KHVIPG+ C R+H + F PC D +R++L+ CL +P CV H+ DPA RR
Sbjct: 13 GISLDALGEPKSGTTWLGRVVPALALELCGSFNNQWCQVGGMTIIPHPPASLHEFELLKRNIDGSGSPELFLHFKGIHKHVIPGMDLGVPVSCRNGGRLHRDYFLDLQPCASDEMPTRDRLVSCLYDTSPSCVRHMPSADPAVRR 157 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1058.563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1058.563.1 >prot_H-canaliculatus_F_contig1058.563.1 ID=prot_H-canaliculatus_F_contig1058.563.1|Name=mRNA_H-canaliculatus_F_contig1058.563.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=401bp MLISATRRVIYAVALAFALSAPFPECATLPVTVSLSHDAPEQSVRHDRAEback to top mRNA from alignment at H-canaliculatus_F_contig1058:14663..29675+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1058.563.1 ID=mRNA_H-canaliculatus_F_contig1058.563.1|Name=mRNA_H-canaliculatus_F_contig1058.563.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=15013bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1058:14663..29675+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1058:14663..29675+ >mRNA_H-canaliculatus_F_contig1058.563.1 ID=mRNA_H-canaliculatus_F_contig1058.563.1|Name=mRNA_H-canaliculatus_F_contig1058.563.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2406bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1058:14663..29675+ (Hapterophycus canaliculatus Oshoro5f female)back to top |