prot_H-canaliculatus_M_contigs9975.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9975.1.1
Unique Nameprot_H-canaliculatus_M_contigs9975.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length100
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9975.1.1 vs. uniprot
Match: D7FYL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL0_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 9.360e-49
Identity = 78/99 (78.79%), Postives = 86/99 (86.87%), Query Frame = 0 
Query:    1 MSPILDFVLLEKNYMAQIKNALAGNATVTFQVDVDLVCDETFYVKDKETGEIVQGQMESAERTHRIRLESCLLMEQTIDQPHTWKVIDLDNWLDGNAFC 99
            MSP L+FVL E N  AQI+NALAGN TVTFQVDVDL CDETFYVKDKETGEI+QG+ ES+ R HR+RLESCLLMEQ I+QPH WKVIDLD+WL GNAFC
Sbjct:  241 MSPSLEFVLQENNAFAQIRNALAGNVTVTFQVDVDLACDETFYVKDKETGEIIQGKKESSGRIHRVRLESCLLMEQAIEQPHIWKVIDLDDWLKGNAFC 339
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9975.1.1 vs. uniprot
Match: A0A836CA16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA16_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.630e-8
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0 
Query:   29 TFQVDVDLVCDETFYVKDKETGEIVQGQMESAERTHRIRLESC---LLMEQTIDQPHTWK--------------VIDLDNWLDGNA 97
            T  VDVD+VC +TF+V++  T  IVQG      RTHR+RLE+      + +  D    W+              VID+D+WLDGN+
Sbjct:  657 TLHVDVDIVCRDTFFVRETATDAIVQGSDAVQTRTHRVRLETTQRRTYVPEDFDMERPWEFKKEWDVWTDLDWQVIDIDDWLDGNS 742
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9975.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYL0_ECTSI9.360e-4978.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CA16_9STRA1.630e-838.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9975contigH-canaliculatus_M_contigs9975:1292..3348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9975.1.1mRNA_H-canaliculatus_M_contigs9975.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9975 105..4023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9975.1.1 ID=prot_H-canaliculatus_M_contigs9975.1.1|Name=mRNA_H-canaliculatus_M_contigs9975.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=100bp
MSPILDFVLLEKNYMAQIKNALAGNATVTFQVDVDLVCDETFYVKDKETG
EIVQGQMESAERTHRIRLESCLLMEQTIDQPHTWKVIDLDNWLDGNAFC*
back to top