prot_H-canaliculatus_M_contigs9878.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_M_contigs9878.2.1
Unique Name	prot_H-canaliculatus_M_contigs9878.2.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length	391

Homology

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BLAST of mRNA_H-canaliculatus_M_contigs9878.2.1 vs. uniprot
Match: D7FQF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF3_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 4.480e-90
Identity = 202/383 (52.74%), Postives = 231/383 (60.31%), Query Frame = 0

Query:   19 GLECVKTTLL-AHGDVRLQCKAANALASLCMSEDVAKGFSAAPNSSAVIDRLGDMLRSRSQWAQADAAGCLGWLVNSLAGGPVLHELTPLMTQLMVKHTTHDDEVFIREEKQRVQQAA-RXXXXXXXXXXXXXXXXXXXXXDDQARERMDNIRVYTLIFLLKASHADPRTMLAMVEAGAIPALLKHLASSARGAHFLQGQQQRDPAGNAAQLGEASGHRKHPLREVVDQGGVGQTPHSLLLAVRLLYTFSLDPCARSCLLEAKSLPPLIRLRRQLQLAAT----------FTAVKQKPTSE------GPDGVLTASSRGKGVSVLETRAIMGNRTAQPKGIGAAGGDRSSAVVAVDESNSQPP---LEVMVGLIVDQMVGKES 380
            GLE VK  LL  H D+RLQCKAANALASLCMSE+VA+GF+AAPNSSAV+DRLGDMLRSRSQWAQADAAGCLGWLV +LAGG  LHEL PL+T+LMV+HTT DDEVFI EE+QR QQA            XXXXXXXXXX  +DQARERMDNIRVY+LIFLLK   AD                    +  ARG   + GQ+     GNAA                   GG  QTP SLLLA RLLY  SLDP  RS LLEAK LPPLIRLRRQL   A            T    +P  E      GP+    A +R  G   +E    +GN+ AQ  G     GD     VA  +S+S+P    +EV+V LIVDQ+VG+ +
Sbjct:   17 GLEAVKDALLKTHADIRLQCKAANALASLCMSEEVARGFTAAPNSSAVVDRLGDMLRSRSQWAQADAAGCLGWLVGTLAGGTALHELIPLVTRLMVRHTTKDDEVFISEERQREQQAVWGRSRSSNSRGXXXXXXXXXXDKEDQARERMDNIRVYSLIFLLKKQEAD--------------------SVRARG---VFGQRHHGTDGNAA------------------DGGGDQTPPSLLLAARLLYAISLDPGGRSSLLEAKCLPPLIRLRRQLHTEAAAEATXXXXXXXTTAAVQPALECTKIPAGPNSGSAAFARKGGTEEVEKEGFVGNQQAQHSG-----GD-----VATGDSSSEPDVEGIEVIVSLIVDQLVGRSN 348

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_M_contigs9878.2.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_M_contigs9878.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FQF3_ECTSI	4.480e-90	52.74	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 3..295 e-value: 1.4E-11 score: 45.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..162
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 11..204

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_M_contigs9878	contig	H-canaliculatus_M_contigs9878:1122..3882 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_M_contigs9878.2.1	mRNA_H-canaliculatus_M_contigs9878.2.1	Hapterophycus canaliculatus Oshoro7m male	mRNA	H-canaliculatus_M_contigs9878 1041..4206 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_M_contigs9878.2.1 ID=prot_H-canaliculatus_M_contigs9878.2.1|Name=mRNA_H-canaliculatus_M_contigs9878.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=391bp
MPCSPDDLRLRSALADSGGLECVKTTLLAHGDVRLQCKAANALASLCMSE
DVAKGFSAAPNSSAVIDRLGDMLRSRSQWAQADAAGCLGWLVNSLAGGPV
LHELTPLMTQLMVKHTTHDDEVFIREEKQRVQQAARDRNHKRKGGGGGSG
GGGGGRKDDQARERMDNIRVYTLIFLLKASHADPRTMLAMVEAGAIPALL
KHLASSARGAHFLQGQQQRDPAGNAAQLGEASGHRKHPLREVVDQGGVGQ
TPHSLLLAVRLLYTFSLDPCARSCLLEAKSLPPLIRLRRQLQLAATFTAV
KQKPTSEGPDGVLTASSRGKGVSVLETRAIMGNRTAQPKGIGAAGGDRSS
AVVAVDESNSQPPLEVMVGLIVDQMVGKESSNSPVRKNDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like