prot_H-canaliculatus_M_contigs9856.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9856.1.1
Unique Nameprot_H-canaliculatus_M_contigs9856.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length117
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: D7FYS9_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS9_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.040e-69
Identity = 109/116 (93.97%), Postives = 113/116 (97.41%), Query Frame = 0
Query:    1 MATPVGTGPIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWKEEEELN 116
            MATPVGTGPIVQDVAPKGG+PKVQISRQLP GRGPRGSV+LGLVT+TMAVGYYKLGQANK RRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFN QLQKGLH+SLNAWKEEEELN
Sbjct:    1 MATPVGTGPIVQDVAPKGGFPKVQISRQLPSGRGPRGSVVLGLVTVTMAVGYYKLGQANKARRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNAQLQKGLHESLNAWKEEEELN 116          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A5J4XG14_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG14_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 3.470e-16
Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWKEEEEL 115
            P++QD  P GG+P V+ +R++P   GP G  +  +    MA G+ K+GQ N  RRA + EK+ AR A+MP+LQAEEDR+ V A    ++ +K L  ++  +K  E+L
Sbjct:   19 PVLQDGPPPGGFPSVRYARRIP-STGPAGFTLFAVTASIMAYGFIKVGQTNHERRAAKAEKKAARFAIMPILQAEEDRRYVQANEAFIRKEKELMKNVPGYKAGEQL 124          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A061QUA6_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUA6_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 4.910e-16
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWK 110
            P++QD  P GG+P ++I+R++P   GP G+ I G+  L M+ G+Y +GQ N  RRA++ E+   R AL+P LQAEEDR+ + AK+  ++ +  +   ++ W+
Sbjct:   19 PVLQDGPPPGGFPSIRIARRIP-NTGPSGAAIFGVGALVMSYGFYLVGQTNIQRRADKAEREHVRRALVPFLQAEEDRRYLKAKKQLLEKEASIMKDVDGWE 119          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A087SFV8_AUXPR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFV8_AUXPR)

HSP 1 Score: 74.7 bits (182), Expect = 1.070e-14
Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWKEEEEL 115
            PIVQD  P GG+P V+ +R+LP   GP G  + G+    MA G+Y++GQ N  RR E+ EK  +R AL+P LQAEEDR+ V A     + QK +  +   +K EE +
Sbjct:   19 PIVQDGPPPGGFPAVRYARRLP-NSGPAGFTLFGVGAAVMAYGFYQVGQGNIKRRDEKREKLDSRRALVPFLQAEEDRRWVAANEEFQKKQKEIMKNHPEYKAEESV 124          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A7S3CKE5_9SPIT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CKE5_9SPIT)

HSP 1 Score: 73.2 bits (178), Expect = 4.460e-14
Identity = 38/84 (45.24%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   10 IVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKR 93
            ++QD  P GG+P V+I+R++P   GP G+ + G+  L ++ G+Y +GQ N  +RA++ EK   R AL+P+LQAEEDR+ V AK+
Sbjct:   22 LLQDGPPAGGFPSVRIARRIP-NTGPSGAAVFGVGALVISYGFYIVGQTNIQKRADRAEKEAVRRALVPVLQAEEDRRFVAAKK 104          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: F0YB35_AURAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB35_AURAN)

HSP 1 Score: 72.4 bits (176), Expect = 8.100e-14
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 0
Query:   10 IVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAK----RFNVQLQKGLHDSLNAWK 110
            +VQD+ P GGYP V I ++    RGP G +I     LT+A G+Y++GQ N  R A + EKR AR+A++P LQAEED +AV AK        ++ KG+ D    WK
Sbjct:   18 VVQDMPPAGGYPDV-IFKKATINRGPDGWMIWVGSLLTVAFGFYRVGQCNLERNAAKKEKREARMAIVPYLQAEEDARAVAAKLNQDADEAEIMKGVKD----WK 117          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: I0YQ01_COCSC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YQ01_COCSC)

HSP 1 Score: 72.4 bits (176), Expect = 8.480e-14
Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWK 110
            P++QD  P GG+P ++ +R++P   GP G  +  +    MA G+Y++G+ N+ RRA + EK   R A+ P+LQAEEDR+ V AK+ +V+ +  +   +  W+
Sbjct:   19 PVLQDGPPPGGFPSIRYARRIP-STGPTGFTLFAVGAAVMAFGFYRVGEFNRYRRALKAEKMTMRTAIYPVLQAEEDRRWVQAKKQSVENEAKIMKDVPGWE 119          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A2P6U3A2_CHLSO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3A2_CHLSO)

HSP 1 Score: 71.6 bits (174), Expect = 1.690e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLA 91
            PIVQD  P GG+P ++ +R++P   GP G  +  +    MA G+YK+GQ+N+ RR E+ E   AR AL+P LQAEEDR+ V A
Sbjct:   19 PIVQDGPPPGGFPAIRYARRVP-STGPSGFTLFAVGAAVMAYGFYKVGQSNRQRRGEKAEHFGARAALVPFLQAEEDRRWVNA 100          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A2P6VLY9_9CHLO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLY9_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 2.280e-13
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGL 102
            P+VQD  P GG+P  + +R++P   GP G  +       MA G+YK+GQ+N+ RRA++     AR AL+P LQAEEDR+ V A +  +  Q+G+
Sbjct:   19 PVVQDGPPPGGFPSFRYARRVP-STGPSGITLFAAGAAVMAFGFYKVGQSNRERRAQKAANLAARAALVPFLQAEEDRRWVNANQTFLARQEGI 111          
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Match: A0A388KNK5_CHABU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KNK5_CHABU)

HSP 1 Score: 68.6 bits (166), Expect = 2.710e-12
Identity = 35/102 (34.31%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    9 PIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAVGYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQKGLHDSLNAWK 110
            P++QD  P GG+P ++ +R++P   GP G V+  +    ++ G Y++GQ N  RRA + EK  AR+A++P++QAEED +   A++  +  ++ +  ++  WK
Sbjct:   19 PVLQDGPPPGGFPAIRYARKIP-NTGPSGVVVFSIAAAVISYGMYQVGQGNLHRRALKKEKMEARMAILPLIQAEEDVRYAKARQKALAEEEKIMQNVPGWK 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9856.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS9_ECTSI1.040e-6993.97NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J4XG14_9CHLO3.470e-1641.12NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A061QUA6_9CHLO4.910e-1639.22NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A087SFV8_AUXPR1.070e-1443.93NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3CKE5_9SPIT4.460e-1445.24NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
F0YB35_AURAN8.100e-1444.76NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
I0YQ01_COCSC8.480e-1437.25NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6U3A2_CHLSO1.690e-1348.19NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2P6VLY9_9CHLO2.280e-1342.55NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A388KNK5_CHABU2.710e-1234.31NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009346GRIM-19PFAMPF06212GRIM-19coord: 10..110
e-value: 2.7E-20
score: 72.6
IPR009346GRIM-19PANTHERPTHR12966NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13coord: 8..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9856contigH-canaliculatus_M_contigs9856:371..3744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9856.1.1mRNA_H-canaliculatus_M_contigs9856.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9856 330..4355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9856.1.1 ID=prot_H-canaliculatus_M_contigs9856.1.1|Name=mRNA_H-canaliculatus_M_contigs9856.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=117bp
MATPVGTGPIVQDVAPKGGYPKVQISRQLPFGRGPRGSVILGLVTLTMAV
GYYKLGQANKGRRAEQHEKRLARIALMPMLQAEEDRKAVLAKRFNVQLQK
GLHDSLNAWKEEEELN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009346GRIM-19