prot_H-canaliculatus_M_contigs9781.5.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9781.5.1
Unique Nameprot_H-canaliculatus_M_contigs9781.5.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length377
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs9781.5.1 vs. uniprot
Match: D7FK60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK60_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 6.370e-38
Identity = 138/374 (36.90%), Postives = 177/374 (47.33%), Query Frame = 0 
Query:   30 PALLETMRESGSAAPPNXXXXXXXXXXXXXXXXXXXXVALLRRDMPEAGIAPDVASYASAMHAAQKAGEWEVALDLWDEIATRRSRPGRSRSS-----------------------------SSLPAPNDHTYGIAIDVCAKAGLVDRALSLLSESKRAGLSPSLIRFNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAAFPEQGDRRITEQEASQGLALVEEMRSYRRPPTNFTHSAAIALCAGSGEHERAMELFQELKASGETPNQAVYTAVIGSCVCKVRTTDGXXXXXXXXGLPLWKTALSLLAEMESVGVAPKVMAYNTAIQACCHGGRWDLGPLILDSMRLAR-VEPDTSSMNALIRGL 373
            PALL  M+E GS AP  XXXXXXXXXXXXXXXXXXXXV+LLR+DMP AG+A DV                     LWDE   R + P  + +S                             + LP PN  +                        + AGL P ++ F S                                     AA          E+E S  L L+EEM+S   PPT+F+HSAAI LC  + +HERA+ELF+EL+ASG+  ++  +TA+I SC     +  G        G   W+TA++LL EME+ GVAP V  +N AI+ACC+GG+W LG  +L  M     V+P+ SSMNALIRGL
Sbjct:  333 PALLRAMKEGGSTAPXXXXXXXXXXXXXXXXXXXXXXVSLLRKDMPAAGVAXDVTXXXXXXXXXXXXXXXXXXXALWDEA--RAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLP-PNLRSXXXXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGK----------------------------AAXXXXXXXXXGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGG-------GEGRWETAVALLDEMEASGVAPSVATFNGAIRACCNGGKWHLGSSLLRRMSAVDGVDPNVSSMNALIRGL 668
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9781.5.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.010e-5
Identity = 49/135 (36.30%), Postives = 60/135 (44.44%), Query Frame = 0 
Query:    6 VEPDSWSYSAVMKACANAEEWRLVPALLETMRESG-------------------------------SAAPPNXXXXXXXXXXXXXXXXXXXXVALLRRDMPEAGIAPDVASYASAMHAAQKAGEWEVALDLWDEI 109
            V PD +SYSA + AC N  EWR   ALL  MRE G                                 A P         XXXXXXX     V  L  +M   G+APDV ++ +A+ A  KAG+WE ALDL +E+
Sbjct:   84 VRPDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKLGETRINGNNGVAEPRGHAAEEEKXXXXXXXEGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEEM 218
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9781.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK60_ECTSI6.370e-3836.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMP8_ECTSI1.010e-536.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 220..374
e-value: 5.1E-28
score: 100.3
coord: 123..219
e-value: 1.1E-22
score: 82.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..122
e-value: 6.3E-25
score: 90.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 151..210
e-value: 1.9E-5
score: 24.6
coord: 3..58
e-value: 0.0011
score: 19.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 243..276
e-value: 0.0012
score: 16.9
coord: 131..164
e-value: 2.9E-5
score: 22.0
coord: 330..363
e-value: 1.3E-5
score: 23.1
coord: 168..200
e-value: 2.6E-7
score: 28.4
coord: 50..83
e-value: 2.5E-6
score: 25.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 46..81
score: 10.950397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..116
score: 9.076014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 9.240434
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 129..163
score: 10.533867
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..275
score: 9.371969
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 243..371
e-value: 2.5E-7
score: 30.2
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 2..290
coord: 128..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9781contigH-canaliculatus_M_contigs9781:3133..4620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9781.5.1mRNA_H-canaliculatus_M_contigs9781.5.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9781 3133..4644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9781.5.1 ID=prot_H-canaliculatus_M_contigs9781.5.1|Name=mRNA_H-canaliculatus_M_contigs9781.5.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=377bp
MGKGGVEPDSWSYSAVMKACANAEEWRLVPALLETMRESGSAAPPNVWHF
NICIDAYAKSGEWESAVALLRRDMPEAGIAPDVASYASAMHAAQKAGEWE
VALDLWDEIATRRSRPGRSRSSSSLPAPNDHTYGIAIDVCAKAGLVDRAL
SLLSESKRAGLSPSLIRFNSAIDACARAGRWGQALELVREIREAGLEPDE
VSFTSAMAAFPEQGDRRITEQEASQGLALVEEMRSYRRPPTNFTHSAAIA
LCAGSGEHERAMELFQELKASGETPNQAVYTAVIGSCVCKVRTTDGGGGG
GGGGGLPLWKTALSLLAEMESVGVAPKVMAYNTAIQACCHGGRWDLGPLI
LDSMRLARVEPDTSSMNALIRGLKPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf