prot_H-canaliculatus_M_contigs9049.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs9049.1.1
Unique Nameprot_H-canaliculatus_M_contigs9049.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length500
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs9049.1.1 vs. uniprot
Match: A0A6H5KD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD91_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.370e-6
Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 0 
Query:  135 LLSPAEPPPERRSLRAVPIKKIPFRSSSSA---PGQAAR----DDPRRLLGNYGEAFAEDTLSCSSG 194
            LLSPAEP P+ R+ RA  +K+IPF +   A   PG++      DDPRRLLGNYGEAFAE    C  G
Sbjct:  154 LLSPAEPLPQPRAPRAPVVKRIPFAAPPVAGVPPGRSKHRRRDDDPRRLLGNYGEAFAEVAEGCGLG 220
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9049.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KD91_9PHAE2.370e-653.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..448

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9049contigH-canaliculatus_M_contigs9049:1255..3187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9049.1.1mRNA_H-canaliculatus_M_contigs9049.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs9049 1255..3187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs9049.1.1 ID=prot_H-canaliculatus_M_contigs9049.1.1|Name=mRNA_H-canaliculatus_M_contigs9049.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=500bp
NGEDLPSFEDEVDDDAALPAGATGLDREPGGRRSTAARAVAGGSCPVSRL
LAGIKDDTDSGSSSGRTNAVVGGANELAPATGAPRQPSSSGPRTLAAAAA
TAATAAAAAAAAPKSSRRAKKKKKREKAKIFDQELLSPAEPPPERRSLRA
VPIKKIPFRSSSSAPGQAARDDPRRLLGNYGEAFAEDTLSCSSGDEEEAE
EQEEEEEEEEDDDDDDDAPPSQEMALVSSSSGSLGFRIPSGVGSGPSTVY
GFSGGGGGGRVGARVSRIVGLTRMVSVDGDCGGGSGSSGAPPPFGGAAFG
SVPMTARPGQGDHAAVATPVAMPVAAPSLVTRGSSSNSVGSGEAGEAAVP
FTSSPAAVSASAAAAGPPAPSLPPPPSTFYQLAADDAVAAFARIPSMSTA
TPHAPQVYNPSSTPGAAAGTKEKLGLPDHRPHHPHHPEDCREDGHQRSSS
SVDAALAALSVAGSSRSSGCSTATLSLDSSVSSSPPRASPTKTPAGGPPA
back to top