prot_H-canaliculatus_M_contigs8909.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8909.1.1
Unique Nameprot_H-canaliculatus_M_contigs8909.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length62
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5JG14_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG14_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 2.400e-29
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGL+E+YSPGDLGFDPL +KPK +A L  MQTKELNNGRLAMIGIAGMLVQELVNPA+ILG
Sbjct:   23 GGLREEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 83
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5JVV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVV6_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.140e-27
Identity = 50/61 (81.97%), Postives = 52/61 (85.25%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:   23 GGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPAGILG 83
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.850e-27
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGL+++YSPGDLGFDPL +KPK +A L  MQTKELNNGRLAMIGIAGMLVQELVNPA+ILG
Sbjct:  161 GGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5JVY1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVY1_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 3.150e-27
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:   71 GGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 131
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 7.860e-27
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP+ EA L  M+TKELNNGRLAMIGIAGMLVQEL+NPA+ILG
Sbjct:  160 GGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.600e-26
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:  132 GGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 2.500e-26
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP  EA L  M+TKELNNGRLAMIGIAGML QELVNPA+ILG
Sbjct:  136 GGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5L7D2_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.390e-26
Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANIL 60
            GGL++DYS GDLGFDPL +KPK +A L TMQTKELNNGRLAMIGIAGMLVQELVN  NIL
Sbjct:   53 GGLRDDYSLGDLGFDPLNLKPKDQAALETMQTKELNNGRLAMIGIAGMLVQELVNSINIL 112
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: A0A6H5JAU1_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.410e-25
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANILG 61
            GGLKEDY PGDLGFDPL +KP   A L  M+TKELNNGRLAMIGIAGM+ QELVNPA+ILG
Sbjct:   95 GGLKEDYMPGDLGFDPLNLKPDDVAALDVMKTKELNNGRLAMIGIAGMMAQELVNPADILG 155
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 2.560e-25
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:    1 GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLVQELVNPANIL 60
            GGL+++YSPGDLGFDPL +KP  +  L TMQTKELNNGRLAMIGIAG LVQELVNP NIL
Sbjct:  115 GGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8909.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG14_9PHAE2.400e-2983.61LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JVV6_9PHAE1.140e-2781.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7S1_ECTSI2.850e-2781.97Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JVY1_9PHAE3.150e-2781.97LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q6_ECTSI7.860e-2781.97Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A6H5K8D0_9PHAE1.600e-2681.97LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7G7S5_ECTSI2.500e-2681.97Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5L7D2_9PHAE3.390e-2681.67LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JAU1_9PHAE1.410e-2578.69LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G7Q7_ECTSI2.560e-2578.33Light harvesting complex protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 4..52
e-value: 6.2E-17
score: 62.6
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 1..61
e-value: 4.4E-18
score: 67.8
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 5..59
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 4..60
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 5..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8909contigH-canaliculatus_M_contigs8909:35..220 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8909.1.1mRNA_H-canaliculatus_M_contigs8909.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8909 35..220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8909.1.1 ID=prot_H-canaliculatus_M_contigs8909.1.1|Name=mRNA_H-canaliculatus_M_contigs8909.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=62bp
GGLKEDYSPGDLGFDPLGIKPKTEADLVTMQTKELNNGRLAMIGIAGMLV
QELVNPANILG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001344Chloro_AB-bd_pln
IPR022796Chloroa_b-bind