prot_H-canaliculatus_M_contigs8902.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8902.1.1
Unique Nameprot_H-canaliculatus_M_contigs8902.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length122
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8902.1.1 vs. uniprot
Match: D7G6N3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N3_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.560e-12
Identity = 75/125 (60.00%), Postives = 82/125 (65.60%), Query Frame = 0 
Query:    1 MRRKQ--STGPGAVSNHDVYDTDPPRAGRLLGYPAAAGSTPLAGTGQAFLPYASLPGTTSRGMSFPGAAGSAGXXXXXXXXXXXXXXXXXXXXXXVAGGDVDMRIRES-QKSGKKGV-FKDWKRR 121
            MRRKQ  S+G GAVSNHD+YDTDPPR GRLLG PA     P  G        A+      RGMSFPGA     XXXXXXXXXXXXXXXXXXXXXX        R+R+S QK GK+G  F+DWKRR
Sbjct:    1 MRRKQQSSSGAGAVSNHDLYDTDPPRPGRLLGMPAPV-PAPQGG--------AAAFNAAGRGMSFPGATXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXRLRDSSQKGGKRGGGFRDWKRR 111
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs8902.1.1 vs. uniprot
Match: A0A6H5JFD0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD0_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 9.040e-10
Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:    1 MRRKQ--STGPGAVSNHDVYDTDPPRAGRLLGYPAAAGSTPLAGTGQAFLPYASLPGTTSRGMSFPGAAGSA 70
            MRRKQ  S+G GAVSNHD+YD DPPR GRLLG  A   S P  G        A+     SRG+SFPGA  ++
Sbjct:    1 MRRKQQSSSGAGAVSNHDLYDADPPRPGRLLGMSAPV-SAPQGG--------AAAFNAASRGLSFPGATAAS 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8902.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6N3_ECTSI4.560e-1260.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFD0_9PHAE9.040e-1052.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8902contigH-canaliculatus_M_contigs8902:3321..3686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8902.1.1mRNA_H-canaliculatus_M_contigs8902.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8902 3321..3686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8902.1.1 ID=prot_H-canaliculatus_M_contigs8902.1.1|Name=mRNA_H-canaliculatus_M_contigs8902.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=122bp
MRRKQSTGPGAVSNHDVYDTDPPRAGRLLGYPAAAGSTPLAGTGQAFLPY
ASLPGTTSRGMSFPGAAGSAGPGGGASAGGAGGIGSSGAGGGGVAGGDVD
MRIRESQKSGKKGVFKDWKRR*
back to top