prot_H-canaliculatus_M_contigs8806.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8806.1.1
Unique Nameprot_H-canaliculatus_M_contigs8806.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length293
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8806.1.1 vs. uniprot
Match: D7G7G5_ECTSI (Nuclear pore protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G5_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 4.820e-125
Identity = 197/256 (76.95%), Postives = 219/256 (85.55%), Query Frame = 0 
Query:   40 AGDHGRVQPKTPRPDRS---TAPPPAAGIIPPVSDLP-ATTDPASRLTALEAGHLAVIRALNDTDGNFPLATRLAASAGSAVTPGVKNGPEHAYFNALKMLEAMFEGEGWEKLGGSNPRSRLDGTLDFLQKQFKHVIEDKVKKAREAGVVDAATLRDTDTGLPFKVRAFMRLDRTNKFSGGSGAVVSSLPVWPQIFLCLRCGGRGDGGAIARAAAQSPENSRCTSQELELLGKVADLLEQGQTESAFGGAVQQSFH 291
            AG+ GRV P+TPRP+ S    A PPA G+IPPVS +P  TTD ASRL+ALE GHLAVIRALNDTDG FPLATRLAASA + VTPGVKNGPEHAYFNALKMLE M EGEGWE  G S  RSRLDGTLDFLQKQFK VI+D+VK+AREAG VDA+T+RDTDTGLPFKVRAFMRLDR +KF  G GA++S LPVWPQIFLCLRCGGR D  AIARAAA+SPENSRCT QELELL KV++LL QG+TE+AFGGA+QQ+FH
Sbjct:  189 AGEQGRVHPETPRPEGSLAVVAVPPAGGVIPPVSAVPPTTTDTASRLSALEVGHLAVIRALNDTDGKFPLATRLAASASTVVTPGVKNGPEHAYFNALKMLETMLEGEGWEGAGASTSRSRLDGTLDFLQKQFKQVIDDQVKRAREAGTVDASTVRDTDTGLPFKVRAFMRLDRKSKFVVGGGAMLSQLPVWPQIFLCLRCGGRADASAIARAAAESPENSRCTPQELELLTKVSELLAQGKTENAFGGAIQQAFH 444
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8806.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7G5_ECTSI4.820e-12576.95Nuclear pore protein n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8806contigH-canaliculatus_M_contigs8806:279..4859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8806.1.1mRNA_H-canaliculatus_M_contigs8806.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8806 279..4871 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8806.1.1 ID=prot_H-canaliculatus_M_contigs8806.1.1|Name=mRNA_H-canaliculatus_M_contigs8806.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=293bp
MGEIANGGSSFGGGGPSFSGGVSLIGGPAGASRGGDGHGAGDHGRVQPKT
PRPDRSTAPPPAAGIIPPVSDLPATTDPASRLTALEAGHLAVIRALNDTD
GNFPLATRLAASAGSAVTPGVKNGPEHAYFNALKMLEAMFEGEGWEKLGG
SNPRSRLDGTLDFLQKQFKHVIEDKVKKAREAGVVDAATLRDTDTGLPFK
VRAFMRLDRTNKFSGGSGAVVSSLPVWPQIFLCLRCGGRGDGGAIARAAA
QSPENSRCTSQELELLGKVADLLEQGQTESAFGGAVQQSFHR*
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