prot_H-canaliculatus_M_contigs8664.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs8664.1.1
Unique Nameprot_H-canaliculatus_M_contigs8664.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length124
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs8664.1.1 vs. uniprot
Match: A0A6H5J7A0_9PHAE (DUF1713 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7A0_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 7.550e-31
Identity = 70/117 (59.83%), Postives = 81/117 (69.23%), Query Frame = 0 
Query:    6 GKWGELSLPLKAAEVFGGFKQAAAGRLQHWASPQALCRASSLVLPGFYQPVPLPRCREHSDGYDDDAEEFREDGAE---GLFDRGLWATSVRRKRVTKMRKHKWRKRRKLQRQSASR 119
            G W   SLP+K  E   G KQA AG LQHWASP AL  A   VLPG  +P  LP+  EH  G ++D +E  E+G +   GL + G+WATSV+RKRVTKMRKHKWRKRRKLQRQSASR
Sbjct:   78 GTWEGSSLPIKVYEAVQGLKQATAGLLQHWASPLALSGAFPFVLPGVGRPALLPQSPEHDQGCEEDEDE-EEEGVDLIGGLSEGGVWATSVKRKRVTKMRKHKWRKRRKLQRQSASR 193
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8664.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7A0_9PHAE7.550e-3159.83DUF1713 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013177Mitochondrial mRNA-processing protein COX24, C-terminalSMARTSM01155DUF1713_2coord: 89..123
e-value: 0.0013
score: 28.0
IPR013177Mitochondrial mRNA-processing protein COX24, C-terminalPFAMPF08213DUF1713coord: 90..116
e-value: 6.2E-6
score: 26.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8664contigH-canaliculatus_M_contigs8664:1522..4875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8664.1.1mRNA_H-canaliculatus_M_contigs8664.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs8664 1070..4875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs8664.1.1 ID=prot_H-canaliculatus_M_contigs8664.1.1|Name=mRNA_H-canaliculatus_M_contigs8664.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=124bp
MAILGGKWGELSLPLKAAEVFGGFKQAAAGRLQHWASPQALCRASSLVLP
GFYQPVPLPRCREHSDGYDDDAEEFREDGAEGLFDRGLWATSVRRKRVTK
MRKHKWRKRRKLQRQSASRRVNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013177COX24_C