prot_H-canaliculatus_M_contigs7996.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7996.1.1
Unique Nameprot_H-canaliculatus_M_contigs7996.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length85
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: D7FUI0_ECTSI (Rab32C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI0_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 3.780e-37
Identity = 67/83 (80.72%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    2 SPAGASPVIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNR 84
            S A  SPVIKILVVGDAGVGKTSVIQR+VNDEFS TH+PTIGVDFFIKEVAL   Q+ + PG+TVRVQLWDIAGQDRA K+NR
Sbjct:    3 SAAETSPVIKILVVGDAGVGKTSVIQRFVNDEFSPTHRPTIGVDFFIKEVALNGDQSESFPGTTVRVQLWDIAGQDRARKMNR 85          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: K3WGR3_GLOUD (Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGR3_GLOUD)

HSP 1 Score: 87.0 bits (214), Expect = 2.760e-19
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV+D FS+ H+ TIGVDF +K V +         G+TVR+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVN--------GTTVRLQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: W2QJV6_PHYPN (Ras-related protein Rab n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2QJV6_PHYPN)

HSP 1 Score: 87.0 bits (214), Expect = 2.870e-19
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV+D FS+ H+ TIGVDF +K V +         G+TVR+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVS--------GTTVRLQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: H3HAQ4_PHYRM (Ras-related protein Rab n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3HAQ4_PHYRM)

HSP 1 Score: 87.0 bits (214), Expect = 2.870e-19
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV+D FS+ H+ TIGVDF +K V +         G+TVR+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVN--------GTTVRLQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: A0A8K1C4T0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T0_PYTOL)

HSP 1 Score: 85.9 bits (211), Expect = 8.020e-19
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV+D F++ H+ TIGVDF +K V +         G+TVR+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVHDAFTEHHRTTIGVDFALKAVTVN--------GTTVRLQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: A0A0P1A3Y3_PLAHL (Ras-related protein Rab n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A3Y3_PLAHL)

HSP 1 Score: 85.5 bits (210), Expect = 1.130e-18
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV D FS+ H+ TIGVDF +K V +         G+T+R+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVYDAFSEHHRTTIGVDFALKPVTVN--------GTTIRMQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: UPI000775BB7F (ras-related protein Rab-7L1 n=1 Tax=Protobothrops mucrosquamatus TaxID=103944 RepID=UPI000775BB7F)

HSP 1 Score: 82.0 bits (201), Expect = 3.520e-18
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            + K+L++GDA VGKTS++QRY ND F++ ++PTIGVDF +K V         S   TVR+QLWDIAGQ+R + + R+
Sbjct:    8 MFKVLIIGDATVGKTSLVQRYANDRFNKYYRPTIGVDFALKVVQW-------SESETVRLQLWDIAGQERFSSMTRL 77          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: A0A3M6VDP7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDP7_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 3.760e-18
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            VIK+LV+GDA  GKTS+I+RYV+D FS+ H+ TIGVDF +K V +         G+TVR+QLWDIAGQ+    +NRV
Sbjct:   13 VIKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVS--------GTTVRLQLWDIAGQEHFRALNRV 81          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: A0A1V9YVF5_9STRA (Ras-related protein Rab n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YVF5_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.100e-18
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            V+K+LV+GDA  GKTS+I+RYV++ FS  H+ TIGVDF +K V + N        +T+RVQLWDIAGQ+    +NRV
Sbjct:   12 VVKVLVLGDAATGKTSIIKRYVHNVFSDQHKTTIGVDFALKPVTVNN--------TTLRVQLWDIAGQEHFRALNRV 80          
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Match: A0A485L2U4_9STRA (Ras-related protein Rab n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L2U4_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 4.430e-18
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    9 VIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKEVALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV 85
            V+K+LV+GDA  GKTS+I+RYV++ FS+ H+ TIGVDF +K V ++N        +T+R+QLWDIAGQ+    +NRV
Sbjct:   14 VVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQN--------TTLRLQLWDIAGQEHFRALNRV 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7996.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUI0_ECTSI3.780e-3780.72Rab32C, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
K3WGR3_GLOUD2.760e-1955.84Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4... [more]
W2QJV6_PHYPN2.870e-1955.84Ras-related protein Rab n=3 Tax=Peronosporaceae Ta... [more]
H3HAQ4_PHYRM2.870e-1955.84Ras-related protein Rab n=17 Tax=Peronosporaceae T... [more]
A0A8K1C4T0_PYTOL8.020e-1954.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1A3Y3_PLAHL1.130e-1854.55Ras-related protein Rab n=1 Tax=Plasmopara halsted... [more]
UPI000775BB7F3.520e-1850.65ras-related protein Rab-7L1 n=1 Tax=Protobothrops ... [more]
A0A3M6VDP7_9STRA3.760e-1855.84t-SNARE coiled-coil homology domain-containing pro... [more]
A0A1V9YVF5_9STRA4.100e-1853.25Ras-related protein Rab n=3 Tax=Saprolegniaceae Ta... [more]
A0A485L2U4_9STRA4.430e-1851.95Ras-related protein Rab n=2 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 59..81
score: 32.93
coord: 33..49
score: 34.3
coord: 10..31
score: 41.29
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 10..84
e-value: 7.3E-5
score: -49.0
NoneNo IPR availablePFAMPF08477Roccoord: 11..83
e-value: 3.2E-20
score: 72.6
NoneNo IPR availablePANTHERPTHR47977:SF44RAB7L1 PROTEINcoord: 9..85
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 9..85
NoneNo IPR availablePROSITEPS51419RABcoord: 5..85
score: 13.327075
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..84
e-value: 1.6E-12
score: 45.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 4..85
e-value: 1.3E-22
score: 81.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7996contigH-canaliculatus_M_contigs7996:537..1243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7996.1.1mRNA_H-canaliculatus_M_contigs7996.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7996 537..1243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7996.1.1 ID=prot_H-canaliculatus_M_contigs7996.1.1|Name=mRNA_H-canaliculatus_M_contigs7996.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=85bp
MSPAGASPVIKILVVGDAGVGKTSVIQRYVNDEFSQTHQPTIGVDFFIKE
VALENGQTIASPGSTVRVQLWDIAGQDRANKVNRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom