prot_H-canaliculatus_M_contigs7947.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7947.1.1
Unique Nameprot_H-canaliculatus_M_contigs7947.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length34
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7947.1.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.800e-11
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 0 
Query:    1 EKWGRLRTLRNDVNKALEQARGAKALGSSLEGQA 34
            EKWGRLRTLRNDVNKALEQARGAK LGSSLEGQA
Sbjct:  925 EKWGRLRTLRNDVNKALEQARGAKVLGSSLEGQA 958
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BLAST of mRNA_H-canaliculatus_M_contigs7947.1.1 vs. uniprot
Match: A0A6H2NJP7_9CYAN (Isoleucine--tRNA ligase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NJP7_9CYAN)

HSP 1 Score: 46.6 bits (109), Expect = 8.210e-5
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:    1 EKWGRLRTLRNDVNKALEQARGAKALGSSLEGQA 34
            E+W +LRT+R +VNK LEQAR AK +GSSLE +A
Sbjct:  821 ERWSQLRTIRQEVNKVLEQARSAKDIGSSLEAKA 854
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7947.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L2M1_9PHAE1.800e-1197.06Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H2NJP7_9CYAN8.210e-564.71Isoleucine--tRNA ligase n=2 Tax=Pseudanabaenales T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableGENE3D3.30.2320.20coord: 1..34
e-value: 3.2E-10
score: 42.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7947contigH-canaliculatus_M_contigs7947:11..112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7947.1.1mRNA_H-canaliculatus_M_contigs7947.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7947 11..112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7947.1.1 ID=prot_H-canaliculatus_M_contigs7947.1.1|Name=mRNA_H-canaliculatus_M_contigs7947.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=34bp
EKWGRLRTLRNDVNKALEQARGAKALGSSLEGQA
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