prot_H-canaliculatus_M_contigs7925.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7925.1.1
Unique Nameprot_H-canaliculatus_M_contigs7925.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length70
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: D8LNL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL8_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.800e-30
Identity = 56/62 (90.32%), Postives = 60/62 (96.77%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            MLPHDADDMTLT VFS FGEITEIYCMRNPDGTPKGCAFVKFSTR+AA+AAIEALHEKCT++
Sbjct:   78 MLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCTMD 139          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A836CBS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.290e-13
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M+P  A++  L  VFS FGE+ E++ +RN DG+ KGCAFVKF  R  AV AI+ALHE+ TLE
Sbjct:  121 MVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLE 182          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7S3UU89_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU89_HETAK)

HSP 1 Score: 67.8 bits (164), Expect = 5.680e-12
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M+P  A +  L  VF+ FG + E++ +R PDG  KGCAFVKF+ R AA+AAI ALHE+ T+E
Sbjct:  133 MVPRAAAEGDLRAVFAPFGALREVHVIRQPDGANKGCAFVKFAERRAALAAIAALHERHTME 194          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7S2EUA5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EUA5_TRICV)

HSP 1 Score: 63.5 bits (153), Expect = 1.700e-11
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M+P   DD  +  +F   GE+  +Y +RNPDGT KGC FVK ++R AA  AI  L+E  TLE
Sbjct:   39 MIPRTMDDKDVRSMFEPHGEVRSVYMIRNPDGTRKGCCFVKMTSREAADVAIGTLNESVTLE 100          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.490e-11
Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M P  A++  +  VF+ +G + EI+ +RN DGT KGCAFVK++TR +A+ AIEALHE+ T++
Sbjct:  137 MAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQ 198          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7R9U3N7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3N7_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.640e-10
Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M+P  A D  ++ VF  FG+I EIY +R+ DG+ +GCAF+KF  R++A+ AI  L++K T+E
Sbjct:  285 MMPRTATDADVSNVFGRFGDIREIYIIRDQDGSSRGCAFLKFKARSSALTAIRELNDKYTME 346          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7S0C1D5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1D5_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.170e-10
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLE 62
            M   +AD+  +  +F+ FGEI EIY +RN DG+ KGCAF+KF  R +A++AIE L++K  +E
Sbjct:    1 MTSRNADESAIRELFAPFGEIREIYIIRNADGSNKGCAFLKFQHRESALSAIEVLNDKIVME 62          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.070e-9
Identity = 30/65 (46.15%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLEVSS 65
            M   +AD+  +  VF+ FGEI EIY +RN DG+ KGCAF+K+S R +A++AI  L+ K  ++ +S
Sbjct:  225 MTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGAS 289          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A7S0TPQ6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TPQ6_HEMAN)

HSP 1 Score: 58.5 bits (140), Expect = 2.120e-9
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNP-DGTPKGCAFVKFSTRAAAVAAIEALHEKCTL 61
            M+   ADD ++   F  FG I E+Y M++     PKGCAFVKF+ RA A +AI+ALH K T+
Sbjct:   25 MISKTADDASIRATFGPFGAIDEVYIMKDKATSQPKGCAFVKFTNRADAQSAIDALHGKVTM 86          
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Match: A0A8C7EB09_NOTPE (RRM domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C7EB09_NOTPE)

HSP 1 Score: 58.5 bits (140), Expect = 2.640e-9
Identity = 33/64 (51.56%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    1 MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVAAIEALHEKCTLEVS 64
            ML     D  +  +F  FG I E   +R PDGT KGCAFVKF + A A AAI ALH   TL VS
Sbjct:   26 MLSKQQADEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQSHAEAQAAIAALHGSRTLPVS 89          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7925.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNL8_ECTSI2.800e-3090.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBS7_9STRA4.290e-1356.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3UU89_HETAK5.680e-1253.23Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2EUA5_TRICV1.700e-1148.39Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
D7FV60_ECTSI2.490e-1150.00Trinucleotide repeat containing 4, isoform CRA_d n... [more]
A0A7R9U3N7_9STRA1.640e-1046.77Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0C1D5_9STRA2.170e-1048.39Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1BYN5_9STRA1.070e-946.15Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S0TPQ6_HEMAN2.120e-948.39Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A8C7EB09_NOTPE2.640e-951.56RRM domain-containing protein n=1 Tax=Nothoprocta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 2..64
e-value: 3.1E-10
score: 50.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 2..59
e-value: 2.1E-13
score: 49.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..70
score: 11.519956
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..67
e-value: 1.1E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 11..64
NoneNo IPR availablePANTHERPTHR24012:SF716CUGBP ELAV-LIKE FAMILY MEMBER 6coord: 11..64
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7925contigH-canaliculatus_M_contigs7925:2410..3196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7925.1.1mRNA_H-canaliculatus_M_contigs7925.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7925 2410..3220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7925.1.1 ID=prot_H-canaliculatus_M_contigs7925.1.1|Name=mRNA_H-canaliculatus_M_contigs7925.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=70bp
MLPHDADDMTLTGVFSGFGEITEIYCMRNPDGTPKGCAFVKFSTRAAAVA
AIEALHEKCTLEVSSFLMGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom