prot_H-canaliculatus_M_contigs7769.2.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7769.2.1
Unique Nameprot_H-canaliculatus_M_contigs7769.2.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length52
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7769.2.1 vs. uniprot
Match: D7FV84_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV84_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 5.870e-12
Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 VLRRGFVAASLSLCT-CRFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEAL 52
            VLR G       LC    FELTRLHR+SVGPIVLGD+EEG CREL+R+EVEAL
Sbjct:  159 VLREGKNRQIRRLCRRSEFELTRLHRISVGPIVLGDVEEGSCRELTRQEVEAL 211
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BLAST of mRNA_H-canaliculatus_M_contigs7769.2.1 vs. uniprot
Match: A0A6H5L3F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F2_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 7.200e-12
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:    1 VLRRGFVAASLSLCT-CRFELTRLHRVSVGPIVLGDLEEGCCRELSRREVEAL 52
            VLR G       LC    FELTRLHR+SVGPIVLGD+ EG CREL+RREVEAL
Sbjct:   55 VLREGKNRQIRRLCRRSEFELTRLHRISVGPIVLGDVAEGSCRELTRREVEAL 107
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BLAST of mRNA_H-canaliculatus_M_contigs7769.2.1 vs. uniprot
Match: A0A2E2K675_9GAMM (Pseudouridine synthase n=1 Tax=Spongiibacteraceae bacterium TaxID=2026793 RepID=A0A2E2K675_9GAMM)

HSP 1 Score: 47.8 bits (112), Expect = 6.330e-5
Identity = 22/31 (70.97%), Postives = 24/31 (77.42%), Query Frame = 0 
Query:   19 ELTRLHRVSVGPIVLGDLEEGCCRELSRREV 49
            E+  LHRVSVGPI LGDLE G CRELS  E+
Sbjct:  200 EVLSLHRVSVGPIALGDLEPGQCRELSEAEI 230
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7769.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FV84_ECTSI5.870e-1267.92Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L3F2_9PHAE7.200e-1267.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2E2K675_9GAMM6.330e-570.97Pseudouridine synthase n=1 Tax=Spongiibacteraceae ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7769contigH-canaliculatus_M_contigs7769:4843..4998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7769.2.1mRNA_H-canaliculatus_M_contigs7769.2.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7769 4843..4998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7769.2.1 ID=prot_H-canaliculatus_M_contigs7769.2.1|Name=mRNA_H-canaliculatus_M_contigs7769.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=52bp
VLRRGFVAASLSLCTCRFELTRLHRVSVGPIVLGDLEEGCCRELSRREVE
AL
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