prot_H-canaliculatus_M_contigs77601.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs77601.1.1
Unique Nameprot_H-canaliculatus_M_contigs77601.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length62
Homology
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: A0A7S0BE89_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE89_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 5.170e-30
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWVG 61
            +VVAWIKRILRVEKTGHSGTLDPKVTGCL+VCIDR+TRLVK+QQSAGKEYVG+ R H  +G
Sbjct:   50 EVVAWIKRILRVEKTGHSGTLDPKVTGCLLVCIDRSTRLVKSQQSAGKEYVGVIRLHSSLG 110          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: A0A7S3L510_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L510_9STRA)

HSP 1 Score: 110 bits (276), Expect = 7.460e-30
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFH 57
            +VV+WIKRILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVKAQQSAGKEYVG+ R H
Sbjct:    3 EVVSWIKRILRVEKTGHSGTLDPKVTGCLIVCLDRATRLVKAQQSAGKEYVGVVRLH 59          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: D8LEX4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX4_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 9.150e-30
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWVGG 62
            +VVAWIKRILRV+KTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFH  V G
Sbjct:  104 EVVAWIKRILRVDKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHSAVDG 165          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: A0A7S2P3D4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3D4_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.170e-29
Identity = 51/57 (89.47%), Postives = 54/57 (94.74%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFH 57
            +VVAWIKRILRVEKTGHSGTLDPKVTGCLIVC DRATRLVKAQQSAGKEY+G+ R H
Sbjct:  100 EVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCCDRATRLVKAQQSAGKEYIGIVRLH 156          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: A0A6I9NX62_9TELE (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NX62_9TELE)

HSP 1 Score: 110 bits (276), Expect = 4.970e-29
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWV 60
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVK+QQSAGKEYVG+ R H  +
Sbjct:   79 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAI 138          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: UPI000528AC26 (H/ACA ribonucleoprotein complex subunit DKC1-like n=1 Tax=Antrostomus carolinensis TaxID=279965 RepID=UPI000528AC26)

HSP 1 Score: 109 bits (273), Expect = 5.300e-29
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWV 60
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVCI+RATRLVK+QQSAGKEYVG+ R H  +
Sbjct:   76 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 135          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: UPI001C4BF9A8 (H/ACA ribonucleoprotein complex subunit DKC1-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4BF9A8)

HSP 1 Score: 110 bits (275), Expect = 6.210e-29
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFH 57
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVC+DRATRLVK+QQSAGKEYVG+ R H
Sbjct:   61 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLH 117          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: H7C0M1_HUMAN (H/ACA ribonucleoprotein complex subunit DKC1 (Fragment) n=3 Tax=Hominidae TaxID=9604 RepID=H7C0M1_HUMAN)

HSP 1 Score: 110 bits (275), Expect = 1.080e-28
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWVGG 62
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVCI+RATRLVK+QQSAGKEYVG+ R H  + G
Sbjct:   90 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEG 151          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: UPI000B3DB469 (H/ACA ribonucleoprotein complex subunit 4-like n=1 Tax=Numida meleagris TaxID=8996 RepID=UPI000B3DB469)

HSP 1 Score: 109 bits (273), Expect = 1.210e-28
Identity = 50/60 (83.33%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWV 60
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVCI+RATRLVK+QQSAGKEYVG+ R H  +
Sbjct:   77 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAI 136          
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Match: A0A3B3D5V3_ORYME (Dyskeratosis congenita 1, dyskerin n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3D5V3_ORYME)

HSP 1 Score: 111 bits (278), Expect = 1.470e-28
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 0
Query:    1 KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEYVGLARFHRWV 60
            +VVAWI+RILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVK+QQSAGKEYVG+ R H  V
Sbjct:  104 EVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGIVRLHNAV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs77601.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0BE89_9RHOD5.170e-3083.61Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3L510_9STRA7.460e-3089.47Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
D8LEX4_ECTSI9.150e-3091.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2P3D4_9STRA1.170e-2989.47Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A6I9NX62_9TELE4.970e-2983.33H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]
UPI000528AC265.300e-2983.33H/ACA ribonucleoprotein complex subunit DKC1-like ... [more]
UPI001C4BF9A86.210e-2987.72H/ACA ribonucleoprotein complex subunit DKC1-like ... [more]
H7C0M1_HUMAN1.080e-2882.26H/ACA ribonucleoprotein complex subunit DKC1 (Frag... [more]
UPI000B3DB4691.210e-2883.33H/ACA ribonucleoprotein complex subunit 4-like n=1... [more]
A0A3B3D5V3_ORYME1.470e-2886.67Dyskeratosis congenita 1, dyskerin n=1 Tax=Oryzias... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 1..60
e-value: 3.8E-20
score: 74.3
NoneNo IPR availablePANTHERPTHR23127:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT DKC1coord: 2..60
IPR002501Pseudouridine synthase II, N-terminalPFAMPF01509TruB_Ncoord: 7..57
e-value: 3.6E-17
score: 63.1
IPR004802tRNA pseudouridine synthase B familyPANTHERPTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5coord: 2..60
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 2..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs77601contigH-canaliculatus_M_contigs77601:153..338 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs77601.1.1mRNA_H-canaliculatus_M_contigs77601.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs77601 153..338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs77601.1.1 ID=prot_H-canaliculatus_M_contigs77601.1.1|Name=mRNA_H-canaliculatus_M_contigs77601.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=62bp
KVVAWIKRILRVEKTGHSGTLDPKVTGCLIVCIDRATRLVKAQQSAGKEY
VGLARFHRWVGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR004802tRNA_PsdUridine_synth_B_fam
IPR002501PsdUridine_synth_N