prot_H-canaliculatus_M_contigs76533.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76533.1.1
Unique Nameprot_H-canaliculatus_M_contigs76533.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length42
Homology
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: D7FHE6_ECTSI (UPF0029 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE6_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.230e-14
Identity = 28/32 (87.50%), Postives = 32/32 (100.00%), Query Frame = 0
Query:   11 RVVEKHPKARHNCWAWRGLGDDHRFSDDGEPG 42
            RV+++HPKARH+CWAWRGLGDDHRFSDDGEPG
Sbjct:   61 RVLKEHPKARHSCWAWRGLGDDHRFSDDGEPG 92          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: H8L4N1_FRAAD (UPF0029 domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / KCTC 2777 / LMG 1558 / NBRC 3245 / NCIMB 13370) TaxID=767434 RepID=H8L4N1_FRAAD)

HSP 1 Score: 50.1 bits (118), Expect = 4.650e-6
Identity = 20/27 (74.07%), Postives = 24/27 (88.89%), Query Frame = 0
Query:   16 HPKARHNCWAWRGLGDDHRFSDDGEPG 42
            H  ARH+CWAWR +G+D+RFSDDGEPG
Sbjct:   44 HADARHHCWAWR-MGEDYRFSDDGEPG 69          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: A0A7U7IBJ9_9PSED (IMPACT family member YigZ n=1 Tax=Pseudomonas carbonaria TaxID=2762745 RepID=A0A7U7IBJ9_9PSED)

HSP 1 Score: 48.5 bits (114), Expect = 1.680e-5
Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 0
Query:    1 TPCKNICWFPRVVEKH--PKARHNCWAWRGLGDDHRFSDDGEPG 42
            TP  +       +  H  P A HNCWAW+ LGD +RFSDDGEPG
Sbjct:   25 TPIASAAEAQAFIAAHSDPGASHNCWAWK-LGDQYRFSDDGEPG 67          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: A0A847HYF1_9DEIN (YigZ family protein n=1 Tax=Deinococcales bacterium TaxID=2478479 RepID=A0A847HYF1_9DEIN)

HSP 1 Score: 48.1 bits (113), Expect = 2.430e-5
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0
Query:   15 KHPKARHNCWAWRGLGDDHRFSDDGEPG 42
            +HP A H+CWAWR +G+  RFSDDGEPG
Sbjct:   44 EHPDATHHCWAWR-IGEQQRFSDDGEPG 70          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: UPI000830E309 (IMPACT family protein n=1 Tax=Castellaniella caeni TaxID=266123 RepID=UPI000830E309)

HSP 1 Score: 48.1 bits (113), Expect = 2.430e-5
Identity = 19/28 (67.86%), Postives = 24/28 (85.71%), Query Frame = 0
Query:   15 KHPKARHNCWAWRGLGDDHRFSDDGEPG 42
            + P+A HNCWAW+ +GD +RFSDDGEPG
Sbjct:   41 RDPQATHNCWAWQ-VGDQYRFSDDGEPG 67          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: A0A839Z4R3_9HYPH (Putative YigZ family protein n=1 Tax=Angulomicrobium tetraedrale TaxID=217068 RepID=A0A839Z4R3_9HYPH)

HSP 1 Score: 47.8 bits (112), Expect = 3.280e-5
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 0
Query:   12 VVEKHPKARHNCWAWRGLGDDHRFSDDGEPG 42
              +  P A HNCWAWR +G ++RFSDDGEPG
Sbjct:   40 AAQSDPGANHNCWAWR-VGQNYRFSDDGEPG 69          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: UPI000F03700B (IMPACT family protein n=3 Tax=Pseudomonas viridiflava TaxID=33069 RepID=UPI000F03700B)

HSP 1 Score: 47.4 bits (111), Expect = 4.590e-5
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 0
Query:   13 VEKH--PKARHNCWAWRGLGDDHRFSDDGEPG 42
            +E+H  P A HNCWAW+ +G  +RFSDDGEPG
Sbjct:   37 IERHSDPAATHNCWAWK-VGQQYRFSDDGEPG 67          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: A6U5M1_SINMW (Uncharacterized protein n=2 Tax=Sinorhizobium medicae TaxID=110321 RepID=A6U5M1_SINMW)

HSP 1 Score: 47.0 bits (110), Expect = 6.150e-5
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 0
Query:   17 PKARHNCWAWRGLGDDHRFSDDGEPG 42
            P A HNCWAWR +G ++RFSDDGEPG
Sbjct:   42 PAANHNCWAWR-VGQNYRFSDDGEPG 66          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: UPI001EDCBD2C (IMPACT family protein n=2 Tax=unclassified Pseudomonas TaxID=196821 RepID=UPI001EDCBD2C)

HSP 1 Score: 47.0 bits (110), Expect = 6.150e-5
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 0
Query:   17 PKARHNCWAWRGLGDDHRFSDDGEPG 42
            P A HNCWAW+ +GD +RFSDDGEPG
Sbjct:   43 PGASHNCWAWK-VGDQYRFSDDGEPG 67          
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Match: W9T3L6_9PSED (Thymidylate synthase n=62 Tax=Gammaproteobacteria TaxID=1236 RepID=W9T3L6_9PSED)

HSP 1 Score: 47.0 bits (110), Expect = 6.240e-5
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 0
Query:   17 PKARHNCWAWRGLGDDHRFSDDGEPG 42
            P A HNCWAW+ LG+ +RFSDDGEPG
Sbjct:   43 PSATHNCWAWK-LGNQYRFSDDGEPG 67          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76533.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FHE6_ECTSI1.230e-1487.50UPF0029 domain-containing protein n=1 Tax=Ectocarp... [more]
H8L4N1_FRAAD4.650e-674.07UPF0029 domain-containing protein n=1 Tax=Frateuri... [more]
A0A7U7IBJ9_9PSED1.680e-552.27IMPACT family member YigZ n=1 Tax=Pseudomonas carb... [more]
A0A847HYF1_9DEIN2.430e-567.86YigZ family protein n=1 Tax=Deinococcales bacteriu... [more]
UPI000830E3092.430e-567.86IMPACT family protein n=1 Tax=Castellaniella caeni... [more]
A0A839Z4R3_9HYPH3.280e-561.29Putative YigZ family protein n=1 Tax=Angulomicrobi... [more]
UPI000F03700B4.590e-562.50IMPACT family protein n=3 Tax=Pseudomonas viridifl... [more]
A6U5M1_SINMW6.150e-573.08Uncharacterized protein n=2 Tax=Sinorhizobium medi... [more]
UPI001EDCBD2C6.150e-573.08IMPACT family protein n=2 Tax=unclassified Pseudom... [more]
W9T3L6_9PSED6.240e-573.08Thymidylate synthase n=62 Tax=Gammaproteobacteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036956Impact, N-terminal domain superfamilyGENE3D3.30.230.30coord: 3..42
e-value: 1.9E-7
score: 32.7
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 12..42
e-value: 5.6E-5
score: 23.4
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 9..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76533contigH-canaliculatus_M_contigs76533:74..199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76533.1.1mRNA_H-canaliculatus_M_contigs76533.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76533 74..199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76533.1.1 ID=prot_H-canaliculatus_M_contigs76533.1.1|Name=mRNA_H-canaliculatus_M_contigs76533.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=42bp
TPCKNICWFPRVVEKHPKARHNCWAWRGLGDDHRFSDDGEPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR001498Impact_N
IPR036956Impact_N_sf