prot_H-canaliculatus_M_contigs76297.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs76297.1.1
Unique Nameprot_H-canaliculatus_M_contigs76297.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length56
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs76297.1.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.080e-9
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0 
Query:    1 MVVGDGNKLRVECFGDLDLVLHCEGHGARWRDVPVMLKGAAVVPGLCFDIISFNQI 56
            + +GDG KL+ ECFG LD+V HC        DV V +K  AVVP L FD++S N I
Sbjct:   46 LFIGDGRKLKAECFGSLDVVFHCR------EDVLVTMKDIAVVPDLAFDLVSLNVI 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs76297.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCD8_9PHAE2.080e-950.00Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs76297contigH-canaliculatus_M_contigs76297:79..246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs76297.1.1mRNA_H-canaliculatus_M_contigs76297.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs76297 79..246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs76297.1.1 ID=prot_H-canaliculatus_M_contigs76297.1.1|Name=mRNA_H-canaliculatus_M_contigs76297.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=56bp
MVVGDGNKLRVECFGDLDLVLHCEGHGARWRDVPVMLKGAAVVPGLCFDI
ISFNQI
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