prot_H-canaliculatus_M_contigs75824.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75824.1.1
Unique Nameprot_H-canaliculatus_M_contigs75824.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length75
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75824.1.1 vs. uniprot
Match: A0A6H5KMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN5_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 6.170e-32
Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 0 
Query:    4 EENKLRDAQDSVQEKGQMGFLRMAAQVDNFRKTSGAGTGDYEADAKAAVLKAMLPAFEPFEAAKE 68
            EEN+LRD QDSVQEKGQMGFLRMAAQVDNFRK+SGAGTGDYEADAKAAVL+AMLPAFEPFEAA+E
Sbjct:    3 EENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEE 67
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BLAST of mRNA_H-canaliculatus_M_contigs75824.1.1 vs. uniprot
Match: D8LSM3_ECTSI (Co-chaperone grpE family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM3_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 2.390e-31
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0 
Query:    1 LILEENKLRDAQDSVQEKGQMGFLRMAAQVDNFRKTSGAGTGDYEADAKAAVLKAMLPAFEPFEAAKE 68
            L+ EEN+LRD QDSVQEKGQMGFLRMAAQVDNFRK+SGAGTGDYEADAKAAVL+AMLPAFEPFEAA+E
Sbjct:  125 LMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEE 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75824.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KMN5_9PHAE6.170e-3292.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSM3_ECTSI2.390e-3189.71Co-chaperone grpE family protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 2..70
e-value: 4.7E-5
score: 25.0
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 20..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75824contigH-canaliculatus_M_contigs75824:309..533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75824.1.1mRNA_H-canaliculatus_M_contigs75824.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75824 309..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75824.1.1 ID=prot_H-canaliculatus_M_contigs75824.1.1|Name=mRNA_H-canaliculatus_M_contigs75824.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=75bp
LILEENKLRDAQDSVQEKGQMGFLRMAAQVDNFRKTSGAGTGDYEADAKA
AVLKAMLPAFEPFEAAKEVGFVFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013805GrpE_coiled_coil