prot_H-canaliculatus_M_contigs75606.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75606.1.1
Unique Nameprot_H-canaliculatus_M_contigs75606.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length68
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: D8LCR7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCR7_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 8.630e-34
Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0
Query:    1 MTMDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGVPFHA 67
            MTMDNMHEDG  PG+FGFDP+ L+ KPA VREKYQLQEIKNGRLAMSAIGGL+HQSLLL GGVPFHA
Sbjct:  168 MTMDNMHEDGNEPGDFGFDPMMLAKKPADVREKYQLQEIKNGRLAMSAIGGLIHQSLLLGGGVPFHA 234          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: A0A835Z4D2_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.290e-21
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 MTMDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGVPFH 66
            MTM +MH DGQ PG+FGFDPL +S  PA + + YQL EIKNGRLAM AI GL+HQS++   GVPF+
Sbjct:  104 MTMMDMHADGQTPGDFGFDPLNVSKDPAKLAQ-YQLSEIKNGRLAMMAISGLIHQSIITGHGVPFN 168          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: A0A1Z5JGJ4_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGJ4_FISSO)

HSP 1 Score: 75.5 bits (184), Expect = 3.130e-15
Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    5 NMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGVPFHA 67
            NM+E  +VPG+FGFDPL L  K A+ R++ QL+E+KNGRLAM AIGG+V QS +   G P+ A
Sbjct:  141 NMNEFDRVPGDFGFDPLNLYPKEAAKRKEMQLKELKNGRLAMVAIGGMVAQSAITGNGFPYLA 203          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: B7G502_PHATC (Protein fucoxanthin chlorophyll a/c protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G502_PHATC)

HSP 1 Score: 73.6 bits (179), Expect = 1.820e-14
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    5 NMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGVPF 65
            NM+E  +VPG+FGFDPLKL  K A+ +E+ QL+E+KNGRLAM AIGG+V  S +   G P+
Sbjct:  145 NMNEFDRVPGDFGFDPLKLYPKDAAKQEQMQLKELKNGRLAMVAIGGMVTGSAITGHGFPY 205          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: A0A1X6NTR2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTR2_PORUM)

HSP 1 Score: 70.5 bits (171), Expect = 3.190e-13
Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 MTMDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLH 60
            ++ D+M EDG++PG FGFDPL L     + ++K +L E+KNGRLAM  IGG++H + + H
Sbjct:  138 LSYDDMFEDGRIPGNFGFDPLGLYKGTPAQKKKLELAEVKNGRLAMIGIGGVIHSNFIYH 197          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: M2VTV2_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTV2_GALSU)

HSP 1 Score: 67.8 bits (164), Expect = 4.010e-12
Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    3 MDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGV 63
            +D   +  + PG+FGFDPL L   P + R++Y++ EIKNGRLAM A+GG +H  LL H GV
Sbjct:  155 LDMFSDPNRKPGDFGFDPLGLGKDPQA-RKRYEVAEIKNGRLAMLAVGGFIHHMLLTHQGV 214          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: Q8RW55_GALSU (Light-harvesting protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q8RW55_GALSU)

HSP 1 Score: 67.4 bits (163), Expect = 5.100e-12
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   10 GQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGG 62
            G+ PG FGFDPL L   P  + +++QL E+KNGRLAM AIGGL+HQS L H G
Sbjct:  157 GREPGYFGFDPLGLGKNP-QLYKRFQLSELKNGRLAMIAIGGLIHQSFLTHMG 208          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: M2Y652_GALSU (Light-harvesting complex protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y652_GALSU)

HSP 1 Score: 67.4 bits (163), Expect = 5.750e-12
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   10 GQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGG 62
            G+ PG FGFDPL L   P  + +++QL E+KNGRLAM AIGGL+HQS L H G
Sbjct:  166 GREPGYFGFDPLGLGKNP-ELYKRFQLSELKNGRLAMIAIGGLIHQSFLTHMG 217          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: Q9FDZ6_GALSU (Light-harvesting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=Q9FDZ6_GALSU)

HSP 1 Score: 67.0 bits (162), Expect = 8.050e-12
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    3 MDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGV 63
            +D   +  + PG+FGFDPL L   P + R +YQ+ EIKNGRLAM A+GG +H   L H GV
Sbjct:  154 LDMFSDPNRKPGDFGFDPLGLGKDPQT-RRRYQVAEIKNGRLAMLAVGGFIHHMFLTHQGV 213          
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Match: A0A7S3L656_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L656_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-11
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    5 NMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIGGLVHQSLLLHGGVPF 65
            NM+E  + PG+FGFDPL L  K  +  +  QL+E+KNGRLAM A+GG+V QS++   G P+
Sbjct:  174 NMNEFDRAPGDFGFDPLGLKPKDEAGYKAMQLKELKNGRLAMIALGGMVAQSVVTGHGFPY 234          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75606.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCR7_ECTSI8.630e-3485.07Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835Z4D2_9STRA4.290e-2163.64Chlorophyll a/b-binding protein domain-containing ... [more]
A0A1Z5JGJ4_FISSO3.130e-1557.14Light-harvesting complex I chlorophyll a/b binding... [more]
B7G502_PHATC1.820e-1457.38Protein fucoxanthin chlorophyll a/c protein n=3 Ta... [more]
A0A1X6NTR2_PORUM3.190e-1348.33Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2VTV2_GALSU4.010e-1250.82Light-harvesting complex protein n=1 Tax=Galdieria... [more]
Q8RW55_GALSU5.100e-1260.38Light-harvesting protein n=2 Tax=Galdieria sulphur... [more]
M2Y652_GALSU5.750e-1260.38Light-harvesting complex protein n=1 Tax=Galdieria... [more]
Q9FDZ6_GALSU8.050e-1250.82Light-harvesting protein n=1 Tax=Galdieria sulphur... [more]
A0A7S3L656_9STRA1.210e-1150.82Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 2..67
e-value: 8.3E-15
score: 57.1
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 6..62
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 7..56
e-value: 3.5E-14
score: 53.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75606contigH-canaliculatus_M_contigs75606:8..211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75606.1.1mRNA_H-canaliculatus_M_contigs75606.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75606 2..211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75606.1.1 ID=prot_H-canaliculatus_M_contigs75606.1.1|Name=mRNA_H-canaliculatus_M_contigs75606.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=68bp
MTMDNMHEDGQVPGEFGFDPLKLSTKPASVREKYQLQEIKNGRLAMSAIG
GLVHQSLLLHGGVPFHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind