prot_H-canaliculatus_M_contigs75259.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75259.1.1
Unique Nameprot_H-canaliculatus_M_contigs75259.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length81
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs75259.1.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 8.740e-30
Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 0 
Query:    1 MRLALTVDSSRLWRQGVPDRSFMGLFLRLSCKMLEMPETVKS-ARQGHLALRLISEPFRLAPGMETEFSSAVFTLVREHRHL 81
            MRLALTVDSSRLWRQG+PDRSFM LFLRLSCKMLE+PET +  +RQ  LA +LI++PF LA GMETE ++AVF LVRE +HL
Sbjct:  218 MRLALTVDSSRLWRQGIPDRSFMSLFLRLSCKMLELPETSRGGSRQAELASQLIAKPFHLAQGMETEVTAAVFLLVRECKHL 299
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75259.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM34_ECTSI8.740e-3073.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024324Condensin complex subunit 1, N-terminalPFAMPF12922Cnd1_Ncoord: 4..53
e-value: 2.7E-5
score: 24.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75259contigH-canaliculatus_M_contigs75259:3..245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75259.1.1mRNA_H-canaliculatus_M_contigs75259.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75259 3..272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75259.1.1 ID=prot_H-canaliculatus_M_contigs75259.1.1|Name=mRNA_H-canaliculatus_M_contigs75259.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=81bp
MRLALTVDSSRLWRQGVPDRSFMGLFLRLSCKMLEMPETVKSARQGHLAL
RLISEPFRLAPGMETEFSSAVFTLVREHRHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024324Condensin_cplx_su1_N