prot_H-canaliculatus_M_contigs75065.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75065.1.1
Unique Nameprot_H-canaliculatus_M_contigs75065.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length181
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: UPI001FE1257A (LysR substrate-binding domain-containing protein n=1 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=UPI001FE1257A)

HSP 1 Score: 228 bits (582), Expect = 5.280e-72
Identity = 111/181 (61.33%), Postives = 135/181 (74.59%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RHS GV+LT AG +FVR+ R+AL+ +  AAADV  +GRGE+G +RIGIFSSLASGFLA++L  Y +++ DV IDI E +P+DHI AVRQ +LD+AFV G P LSDCD+A+FWTE + VVLP  HPLA    I W DL  ETFILSE   G E+ +FL+KHL DLG  P IE H VGRD
Sbjct:   25 LFNRHSSGVILTHAGKKFVRHARQALSEVSCAAADVGPIGRGEEGAVRIGIFSSLASGFLAQMLRSYSDRYGDVRIDIAEGSPSDHISAVRQHKLDVAFVTGAPSLSDCDAAQFWTERVFVVLPDAHPLAERKSIRWEDLHAETFILSEGDPGPEIHDFLIKHLADLGIHPSIERHRVGRD 205          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A1H7S2P2_9RHOB (Transcriptional regulator, LysR family n=1 Tax=Jannaschia helgolandensis TaxID=188906 RepID=A0A1H7S2P2_9RHOB)

HSP 1 Score: 225 bits (574), Expect = 1.750e-70
Identity = 109/181 (60.22%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RHSGGV+LT AG +FVR+ R+AL+ +  AAADV  +GRGE+GV+R+GIFSSLASGFLA++L  Y  ++ DV IDI E AP DHI AVR  +LD+AFV G P L+DCD+A+ WTE + V+LP+ H L   T I W DLR ETFILSE   G E+ +FL+KHL DLG  P IE H VGRD
Sbjct:   49 LFNRHSGGVILTHAGKKFVRHARQALSEVSSAAADVGLIGRGEEGVVRVGIFSSLASGFLAQMLRAYSNRYGDVRIDIVEGAPLDHISAVRMHKLDVAFVTGVPALTDCDAAQLWTERVFVMLPEAHALTKRTLIKWDDLREETFILSEGDPGPEIHDFLIKHLADLGVHPAIERHRVGRD 229          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: UPI000DF4AFB3 (LysR family transcriptional regulator n=1 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=UPI000DF4AFB3)

HSP 1 Score: 225 bits (573), Expect = 2.480e-70
Identity = 108/181 (59.67%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RHSGGV+LT AG +FVR+ R+AL+ +  A  DV  +G GE GV+RIGIFSSLASGFLA++L  Y +++ DV +DI E AP+DHI AVR  +LD+AFV GTP L+DCD+A+FWTE +  VLP+ H LA    + W DLR ETFILSER  G E+ +FL+KHL DLG  P IE H VGRD
Sbjct:   49 LFNRHSGGVILTHAGKKFVRHARQALSEVSCALTDVGPIGHGEAGVVRIGIFSSLASGFLAQMLRTYSDRYGDVCVDIIEGAPSDHISAVRMHKLDVAFVTGTPKLTDCDAAQFWTERVFAVLPEGHGLAERAAVRWGDLRSETFILSERDPGPEIQDFLIKHLADLGVHPAIERHRVGRD 229          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A506U1Q4_9HYPH (LysR family transcriptional regulator n=2 Tax=Pararhizobium mangrovi TaxID=2590452 RepID=A0A506U1Q4_9HYPH)

HSP 1 Score: 195 bits (495), Expect = 5.030e-59
Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LFIRHS GV LT AG R++   R A+  +  AA D  ++GRGE G++RIG+FSSLASGFLARLL  +GE+HP V I +FE  P+DH++A+R+ RLD+AF+ G P    CD+   W + I V LP+ H LA+  EI W DL+   FI+SE+  G E+ +FL+KHL D G  P +E H VGRD
Sbjct:   47 LFIRHSAGVHLTHAGHRYILATRAAMRHICDAAIDARSLGRGESGILRIGVFSSLASGFLARLLKDFGEKHPGVRIVLFEGGPSDHLVAIRRHRLDVAFLTGQPTAESCDTVYLWNDRIFVALPEKHDLASAQEISWPDLKSCPFIVSEKHPGPEIQDFLLKHLADFGFHPRLERHRVGRD 227          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A199YAU1_9PROT (LysR family transcriptional regulator n=10 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A199YAU1_9PROT)

HSP 1 Score: 195 bits (496), Expect = 8.770e-59
Identity = 95/181 (52.49%), Postives = 123/181 (67.96%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RH+ GV  T AG RF+   RRA+  +D+ A +V+A GR EQG +RIGI+SS+ASGFLA+LL  YG  H DV I++ +  PA+H+ A+RQFRLD+AF+ G      CD A  W+E + VVLP  HPLAA  E++WRDL  E FI+SE   G E+ + LV+ L DLG  P I+  SVGRD
Sbjct:   57 LFHRHAWGVSQTFAGQRFLHRARRAIKTIDEGAHEVAAAGRSEQGRVRIGIYSSIASGFLAKLLASYGRSHKDVRIELIDGNPAEHVAAIRQFRLDVAFLTGDREWPGCDRAPLWSERVFVVLPDLHPLAALDEVMWRDLADEPFIVSEAAPGQEIHDHLVRELADLGRHPEIQVQSVGRD 237          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A0V0Q5Q9_9RHOB (LysR family transcriptional regulator n=2 Tax=Paracoccus sp. MKU1 TaxID=1745182 RepID=A0A0V0Q5Q9_9RHOB)

HSP 1 Score: 194 bits (494), Expect = 9.480e-59
Identity = 97/181 (53.59%), Postives = 121/181 (66.85%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LFIRH  GV LT+AG RF+ + RRAL  LD A  DV A GR EQGV+RIGIF+SLASGFLA LL  Y E+HP V   I E  P+DHI A+RQ R+D+AF+ GTP  ++CD   FW E + V LP+   L A   I+W +LR   FI+SE G G E+ ++LV+HL +LG  P +E   V RD
Sbjct:   56 LFIRHKRGVTLTDAGKRFLAHARRALDELDLAIKDVGAAGRAEQGVLRIGIFASLASGFLADLLRRYNEEHPGVRSVIIEGGPSDHIAAIRQHRMDVAFLTGTPDAAECDVEVFWKERVFVALPERDDLVARKRIVWSELRDRHFIVSEAGPGPEIHDYLVRHLSELGHHPSVERCPVSRD 236          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A258IPN1_9HYPH (LysR family transcriptional regulator n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A258IPN1_9HYPH)

HSP 1 Score: 193 bits (491), Expect = 4.090e-58
Identity = 96/181 (53.04%), Postives = 120/181 (66.30%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LFIRH GGV LT+AG RFV   R+AL+ +  AA D  + GRGE GV+RIGIFSSLASGFL+ LL  Y   +P+V  D+ E  P DHI +V++ RLD+AF+ G P    CD A  W E ++V +P  H LA   EI WR+LR   FI+SE   G E+ ++LVKHL DLG  P +E H VGRD
Sbjct:   61 LFIRHHGGVHLTQAGERFVIRARQALSQIGHAAIDAGSFGRGETGVVRIGIFSSLASGFLSDLLRAYVGANPEVRPDLIEGGPTDHIASVQRHRLDIAFLTGQPIADGCDLAHLWNERVYVAVPSDHELARKREISWRNLRDRHFIVSETDPGPEIHDYLVKHLADLGHHPSVERHGVGRD 241          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A318TC61_9BRAD (LysR family transcriptional regulator n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A318TC61_9BRAD)

HSP 1 Score: 192 bits (489), Expect = 7.530e-58
Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RH+GGV+LT AG RFVR+ R+AL  ++  A DV+ +GR E G I+IGIFSSLASGFL  LL  YG+ H  V I++ +  PADH+ A+RQ RLD+AF+ GT    DC+  + W+E + VVLP  HPL    E+ W DL GE FI+S+   G E+ ++LV+ L DLG  P I    VGRD
Sbjct:   47 LFQRHNGGVILTLAGQRFVRHTRKALRQIESGAKDVATIGRSEDGRIKIGIFSSLASGFLPELLRAYGQGHAQVRIELIDGDPADHVSAIRQLRLDVAFITGTSQWPDCEVDQLWSERVFVVLPANHPLCGKDELNWHDLVGERFIVSDGAPGPEIHDYLVQRLADLGRHPEIHTQYVGRD 227          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: K8P7H2_9BRAD (HTH lysR-type domain-containing protein n=8 Tax=Proteobacteria TaxID=1224 RepID=K8P7H2_9BRAD)

HSP 1 Score: 191 bits (486), Expect = 2.250e-57
Identity = 90/181 (49.72%), Postives = 127/181 (70.17%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF RH+GGV LT AG +FVR  R+ L  +D  A DV+A+GR E+G I++GIFSSLASGFL+ LL  YG++H  V ++ F+  PADH+ ++R+ +LD+AF+ GT   SDC++ + W+E +  VLP  HPL+  +E+ WRDL  E FI+S+   GSE+ ++LV+ L DLG  P I+   VGRD
Sbjct:   48 LFQRHNGGVCLTLAGQQFVRRARKPLQQIDCGAKDVAAIGRSERGHIKVGIFSSLASGFLSDLLGAYGKEHASVRVEFFDGDPADHVASIRRLQLDVAFITGTTQWSDCETEQLWSERVFAVLPSDHPLSEKSELGWRDLVDERFIVSDGAPGSEIHDYLVQRLADLGRHPEIDTQYVGRD 228          
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Match: A0A6N6T358_9HYPH (LysR family transcriptional regulator n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6N6T358_9HYPH)

HSP 1 Score: 190 bits (483), Expect = 5.390e-57
Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 0
Query:    1 LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIGIFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFVVGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSERGLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD 181
            LF+RH GGV LT AG RF+   RRAL+ +  AA D  + GRGE GV+RIGIFSSLASGFL+ LL  Y   +P V  D+ E  PA HI++V++  LD+AF+ G P    CD A  W E ++V LP  H LA+  EILW DL    FI+SE   G E+ ++L+KHL DLG  P +E H VGRD
Sbjct:   49 LFVRHHGGVRLTHAGERFLVRARRALSQIGHAAIDAGSCGRGEAGVVRIGIFSSLASGFLSDLLRTYVGANPGVRPDLIEGGPAGHIISVQRHHLDIAFLTGRPVADGCDVAHLWDERVYVALPGDHELASRAEILWADLADAHFIISETDPGPEIHDYLIKHLADLGRHPSVERHRVGRD 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75065.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FE1257A5.280e-7261.33LysR substrate-binding domain-containing protein n... [more]
A0A1H7S2P2_9RHOB1.750e-7060.22Transcriptional regulator, LysR family n=1 Tax=Jan... [more]
UPI000DF4AFB32.480e-7059.67LysR family transcriptional regulator n=1 Tax=Noto... [more]
A0A506U1Q4_9HYPH5.030e-5951.93LysR family transcriptional regulator n=2 Tax=Para... [more]
A0A199YAU1_9PROT8.770e-5952.49LysR family transcriptional regulator n=10 Tax=Alp... [more]
A0A0V0Q5Q9_9RHOB9.480e-5953.59LysR family transcriptional regulator n=2 Tax=Para... [more]
A0A258IPN1_9HYPH4.090e-5853.04LysR family transcriptional regulator n=5 Tax=Hyph... [more]
A0A318TC61_9BRAD7.530e-5851.38LysR family transcriptional regulator n=6 Tax=Alph... [more]
K8P7H2_9BRAD2.250e-5749.72HTH lysR-type domain-containing protein n=8 Tax=Pr... [more]
A0A6N6T358_9HYPH5.390e-5751.93LysR family transcriptional regulator n=3 Tax=Hyph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..41
e-value: 1.3E-5
score: 26.9
IPR005119LysR, substrate-bindingPFAMPF03466LysR_substratecoord: 41..170
e-value: 1.4E-25
score: 90.0
NoneNo IPR availableGENE3D3.40.190.290coord: 47..175
e-value: 6.5E-24
score: 86.5
NoneNo IPR availablePANTHERPTHR30346TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATEDcoord: 1..174
NoneNo IPR availableCDDcd08414PBP2_LTTR_aromatics_likecoord: 46..171
e-value: 6.60261E-28
score: 101.43
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 42..173
IPR000847Transcription regulator HTH, LysRPROSITEPS50931HTH_LYSRcoord: 1..12
score: 9.380812

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75065contigH-canaliculatus_M_contigs75065:3..545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75065.1.1mRNA_H-canaliculatus_M_contigs75065.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75065 3..545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75065.1.1 ID=prot_H-canaliculatus_M_contigs75065.1.1|Name=mRNA_H-canaliculatus_M_contigs75065.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=181bp
LFIRHSGGVVLTEAGTRFVRNVRRALTVLDQAAADVSAVGRGEQGVIRIG
IFSSLASGFLARLLTVYGEQHPDVEIDIFEAAPADHILAVRQFRLDLAFV
VGTPHLSDCDSAEFWTESIHVVLPQTHPLAAHTEILWRDLRGETFILSER
GLGSEVSNFLVKHLGDLGAPPCIEWHSVGRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000847Tscrpt_reg_HTH_LysR
IPR005119LysR_subst-bd
IPR036388WH-like_DNA-bd_sf