prot_H-canaliculatus_M_contigs75014.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs75014.1.1
Unique Nameprot_H-canaliculatus_M_contigs75014.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length60
Homology
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 5.780e-11
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:   18 QVQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            +VQTLGVDFKLKTIV+NDEEVDLQVWDTAGQ     +T +++    G+
Sbjct:   82 KVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGI 129          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.780e-10
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0
Query:   18 QVQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            +VQTLGVDFKLKTI +NDEEVDLQVWDTAGQ     +T +++    G+
Sbjct:  972 KVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGI 1019          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A8C0HEH7_CHEAB (Uncharacterized protein n=2 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0HEH7_CHEAB)

HSP 1 Score: 54.7 bits (130), Expect = 1.340e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++T+VIN E V LQ+WDTAGQ     +TS+++ +  GV
Sbjct:   13 ITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITSTYYRNTHGV 59          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A8C4YD47_9SAUR (Ras-related protein Rab-35-like n=1 Tax=Gopherus evgoodei TaxID=1825980 RepID=A0A8C4YD47_9SAUR)

HSP 1 Score: 54.7 bits (130), Expect = 1.510e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++T+VIN E V LQ+WDTAGQ     +TS+++ +  GV
Sbjct:   22 ITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITSTYYRNTHGV 68          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A6P9BVN4_PANGU (ras-related protein Rab-35-like isoform X2 n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9BVN4_PANGU)

HSP 1 Score: 54.3 bits (129), Expect = 1.650e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++T+VIN E V LQ+WDTAGQ     +TS+++ +  GV
Sbjct:   39 ITTIGVDFKIRTLVINGERVKLQIWDTAGQERFRTITSTYYRNTHGV 85          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A024VT01_PLAFA (Ras-like GTP-binding protein YPT1 n=1 Tax=Plasmodium falciparum FCH/4 TaxID=1036724 RepID=A0A024VT01_PLAFA)

HSP 1 Score: 52.4 bits (124), Expect = 1.700e-7
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK+KTI I D+ + LQ+WDTAGQ     +TSS++   +G+
Sbjct:   33 ISTIGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGI 79          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: UPI000703DF18 (ras-related protein ORAB-1-like n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI000703DF18)

HSP 1 Score: 54.3 bits (129), Expect = 1.700e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++T+VIN E V LQ+WDTAGQ     +TS+++ +  GV
Sbjct:   53 ITTIGVDFKIRTLVINGERVKLQIWDTAGQERFRTITSTYYRNTHGV 99          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A8C5EZI6_9SAUR (Ras-related protein Rab-35-like n=9 Tax=Sauria TaxID=32561 RepID=A0A8C5EZI6_9SAUR)

HSP 1 Score: 54.7 bits (130), Expect = 1.850e-7
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++T+VIN E V LQ+WDTAGQ     +TS+++ +  GV
Sbjct:   39 ITTIGVDFKIRTVVINGERVKLQIWDTAGQERFRTITSTYYRNTHGV 85          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: T1G4Y3_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G4Y3_HELRO)

HSP 1 Score: 54.7 bits (130), Expect = 1.850e-7
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK++TI++N+E V LQ+WDTAGQ     +TS+++    GV
Sbjct:   38 ITTIGVDFKIRTIIVNNERVKLQIWDTAGQERFRTITSTYYRGTHGV 84          
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Match: A0A023BA03_GRENI (Small GTPase family Rab subfamily protein n=2 Tax=Gregarina niphandrodes TaxID=110365 RepID=A0A023BA03_GRENI)

HSP 1 Score: 54.7 bits (130), Expect = 1.850e-7
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   19 VQTLGVDFKLKTIVINDEEVDLQVWDTAGQ-----VTSSFFLSRRGV 60
            + T+GVDFK+KTI++ D++V LQ+WDTAGQ     +TSS++   +G+
Sbjct:   39 ISTIGVDFKIKTIMLEDKKVKLQIWDTAGQERFRTITSSYYRGAQGI 85          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs75014.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMQ2_ECTSI5.780e-1164.58Rab8E, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KJK4_9PHAE2.780e-1062.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8C0HEH7_CHEAB1.340e-751.06Uncharacterized protein n=2 Tax=Chelonoidis abingd... [more]
A0A8C4YD47_9SAUR1.510e-751.06Ras-related protein Rab-35-like n=1 Tax=Gopherus e... [more]
A0A6P9BVN4_PANGU1.650e-751.06ras-related protein Rab-35-like isoform X2 n=1 Tax... [more]
A0A024VT01_PLAFA1.700e-748.94Ras-like GTP-binding protein YPT1 n=1 Tax=Plasmodi... [more]
UPI000703DF181.700e-751.06ras-related protein ORAB-1-like n=1 Tax=Pelodiscus... [more]
A0A8C5EZI6_9SAUR1.850e-751.06Ras-related protein Rab-35-like n=9 Tax=Sauria Tax... [more]
T1G4Y3_HELRO1.850e-748.94Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
A0A023BA03_GRENI1.850e-748.94Small GTPase family Rab subfamily protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPasePFAMPF00071Rascoord: 18..48
e-value: 8.9E-8
score: 31.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..57
e-value: 5.6E-8
score: 34.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs75014contigH-canaliculatus_M_contigs75014:294..473 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs75014.1.1mRNA_H-canaliculatus_M_contigs75014.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs75014 294..473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs75014.1.1 ID=prot_H-canaliculatus_M_contigs75014.1.1|Name=mRNA_H-canaliculatus_M_contigs75014.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=60bp
GVDCRLFCCTRAVALRVQVQTLGVDFKLKTIVINDEEVDLQVWDTAGQVT
SSFFLSRRGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase