prot_H-canaliculatus_M_contigs74995.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs74995.1.1
Unique Nameprot_H-canaliculatus_M_contigs74995.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length47
Homology
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: D7G3D1_ECTSI (Rad21_Rec8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3D1_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 4.540e-19
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            +NILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM
Sbjct:   42 ENILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 87          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A7S3YM80_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM80_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 1.360e-16
Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    1 ADNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            AD+I+ PTVPLALR+SGHLLLGL RIYSRKVKYLM+D SEALVKI+M
Sbjct:   43 ADSIVNPTVPLALRVSGHLLLGLTRIYSRKVKYLMTDCSEALVKIKM 89          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: W7TL72_9STRA (Mitotic cohesin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL72_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.260e-16
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            D+I+ PTVPLALR+SGHLLLG+VRIYSRKVKYLM D S+AL KI+M
Sbjct:   42 DSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKM 87          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: B8C9U8_THAPS (Rad21_Rec8_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U8_THAPS)

HSP 1 Score: 72.8 bits (177), Expect = 1.190e-15
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            D+I+ PTVPLALR+SGHLLLG+VRIYSRKV+YLM D  EA+VKI+M
Sbjct:   43 DSIVNPTVPLALRVSGHLLLGVVRIYSRKVRYLMHDCHEAMVKIKM 88          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A7S2XQ04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQ04_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.190e-15
Identity = 35/46 (76.09%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            ++I+ PTVPLALR+SGHLLLG+VRIYSRKVKYLM D  EA+VKI+M
Sbjct:   43 ESIVNPTVPLALRVSGHLLLGVVRIYSRKVKYLMHDCHEAMVKIKM 88          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: K0RNW5_THAOC (Rad21_Rec8_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RNW5_THAOC)

HSP 1 Score: 74.7 bits (182), Expect = 6.290e-15
Identity = 36/46 (78.26%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            D+I+ PTVPLALR+SGHLLLG+VRIYSRKVKYLM+D  EA+VKI+M
Sbjct:   43 DSIVNPTVPLALRVSGHLLLGVVRIYSRKVKYLMTDCHEAMVKIKM 88          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A6G0WH47_9STRA (Rad21_Rec8_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WH47_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.390e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 ADNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            AD+I  P VPLALR+SGHLLLG+ RIYSRKV YL +D SEALVKI+M
Sbjct:   41 ADSIANPVVPLALRVSGHLLLGVTRIYSRKVNYLFTDCSEALVKIKM 87          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A6U6IWB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IWB3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.570e-14
Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            D+I+ P VPLALR+SGHLLLG+VRIYSRKV+YLM D  EA+VKI+M
Sbjct:   43 DSIVNPAVPLALRVSGHLLLGVVRIYSRKVRYLMHDCHEAMVKIKM 88          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A425DG66_9STRA (Rad21_Rec8_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DG66_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.810e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 ADNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            AD+I  P VPLALR+SGHLLLG+ RIYSRKV YL +D SEALVKI+M
Sbjct:   41 ADSIANPVVPLALRVSGHLLLGVTRIYSRKVNYLFTDCSEALVKIKM 87          
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Match: A0A4D9CUA7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.490e-14
Identity = 36/46 (78.26%), Postives = 42/46 (91.30%), Query Frame = 0
Query:    2 DNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM 47
            D+I+ PTVPLALR+SGHLLLG+VRIYSRKVKYLM D S+AL KI+M
Sbjct:   42 DSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKM 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74995.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3D1_ECTSI4.540e-1997.83Rad21_Rec8_N domain-containing protein n=2 Tax=Ect... [more]
A0A7S3YM80_HETAK1.360e-1682.98Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TL72_9STRA3.260e-1678.26Mitotic cohesin n=1 Tax=Nannochloropsis gaditana T... [more]
B8C9U8_THAPS1.190e-1576.09Rad21_Rec8_N domain-containing protein (Fragment) ... [more]
A0A7S2XQ04_9STRA5.190e-1576.09Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
K0RNW5_THAOC6.290e-1578.26Rad21_Rec8_N domain-containing protein n=1 Tax=Tha... [more]
A0A6G0WH47_9STRA1.390e-1474.47Rad21_Rec8_N domain-containing protein n=1 Tax=Aph... [more]
A0A6U6IWB3_9STRA1.570e-1473.91Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A425DG66_9STRA1.810e-1474.47Rad21_Rec8_N domain-containing protein n=1 Tax=Aph... [more]
A0A4D9CUA7_9STRA2.490e-1478.26Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006910Rad21/Rec8-like protein, N-terminalPFAMPF04825Rad21_Rec8_Ncoord: 2..47
e-value: 3.6E-17
score: 62.5
IPR039781Rad21/Rec8-like proteinPANTHERPTHR12585SCC1 / RAD21 FAMILY MEMBERcoord: 2..47
NoneNo IPR availablePANTHERPTHR12585:SF29FI11703Pcoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74995contigH-canaliculatus_M_contigs74995:274..414 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74995.1.1mRNA_H-canaliculatus_M_contigs74995.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs74995 274..414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs74995.1.1 ID=prot_H-canaliculatus_M_contigs74995.1.1|Name=mRNA_H-canaliculatus_M_contigs74995.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=47bp
ADNILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039781Rad21/Rec8-like
IPR006910Rad21_Rec8_N