prot_H-canaliculatus_M_contigs7496.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7496.1.1
Unique Nameprot_H-canaliculatus_M_contigs7496.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length254
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7496.1.1 vs. uniprot
Match: D7G0R0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 6.530e-13
Identity = 150/197 (76.14%), Postives = 156/197 (79.19%), Query Frame = 0 
Query:    1 GLGLSADDVGKMIKKHPPIVAYNIVHNLRPKLRWLQQEVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSHLSNRAVRRVLFRQPSLLGHNAXXXXXXXXXXXQDRLGMAEAAAWKFIG 197
            GLGLSADDVGKMI+KHP IVA +IVHNLRPKLR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXX                   +SH S++ VRRVLFRQPSLLGHNA  XXXXXXXXXQDRLGM+EAAAWKFIG
Sbjct:  376 GLGLSADDVGKMIRKHPAIVACSIVHNLRPKLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPTFFTLSSXXXXXXXXXXL------------------TSHASSKVVRRVLFRQPSLLGHNADGXXXXXXXXXQDRLGMSEAAAWKFIG 554
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BLAST of mRNA_H-canaliculatus_M_contigs7496.1.1 vs. uniprot
Match: A0A6H5JAG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG1_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 6.630e-6
Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:    1 GLGLSADDVGKMIKKHPPIVAYNIVHNLRPKLR 33
            GLGLS DDVGKMI+K+P IVA +IVHNLRPKLR
Sbjct:  370 GLGLSTDDVGKMIRKNPAIVACSIVHNLRPKLR 402
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7496.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0R0_ECTSI6.530e-1376.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAG1_9PHAE6.630e-681.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 47..79
e-value: 3.0E-4
score: 30.1
coord: 193..225
e-value: 1.3
score: 18.0
coord: 10..42
e-value: 3.2E-4
score: 30.0
coord: 84..116
e-value: 46.0
score: 12.9
coord: 156..188
e-value: 0.34
score: 20.0
coord: 121..153
e-value: 21.0
score: 14.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 38..249
e-value: 1.0E-21
score: 77.2
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 119..240
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 35..147
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 3..109
coord: 77..182
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 1..151
e-value: 9.0E-33
score: 115.5
NoneNo IPR availablePANTHERPTHR13068:SF133MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 35..147
coord: 77..182
NoneNo IPR availablePANTHERPTHR13068:SF133MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 119..240
NoneNo IPR availablePANTHERPTHR13068:SF133MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 3..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7496contigH-canaliculatus_M_contigs7496:3..4522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7496.1.1mRNA_H-canaliculatus_M_contigs7496.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7496 3..4522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7496.1.1 ID=prot_H-canaliculatus_M_contigs7496.1.1|Name=mRNA_H-canaliculatus_M_contigs7496.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=254bp
GLGLSADDVGKMIKKHPPIVAYNIVHNLRPKLRWLQQEVGLSRSQAVRLV
VRCPALFALGIDDNMAPKVEWLKDTLGFTRKQAARAVYANPGILLSSIEG
SLMPKISWLAEALQMDEDTVFDMIRRFPPFFTLSSEENLAPKLEWLSSHL
SNRAVRRVLFRQPSLLGHNADGNLAPKVMWLQDRLGMAEAAAWKFIGRSP
GFLTLSVSDNLEPKLWWLRDKLDVSLDGAAKMLTTYPNLFGLSIEASLEP
KLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF