prot_H-canaliculatus_M_contigs74913.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs74913.1.1
Unique Nameprot_H-canaliculatus_M_contigs74913.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length42
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74913.1.1 vs. uniprot
Match: A0A6H5KF87_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF87_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.610e-11
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MFGEEGLVVNLATTATAVAEGPVSCVGMDRATFTE 35
            MFGEE LVVNLATTATA+AEGPVSCVGMDRA FTE
Sbjct: 1028 MFGEEALVVNLATTATAIAEGPVSCVGMDRAKFTE 1062
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BLAST of mRNA_H-canaliculatus_M_contigs74913.1.1 vs. uniprot
Match: D8LF40_ECTSI (Putative two-pore calcium channel (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF40_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 9.120e-11
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:    1 MFGEEGLVVNLATTATAVAEGPVSCVGMDRATFTE 35
            MFGEE LVVNLAT+ATA+AEGPVSCVGMDRA FTE
Sbjct:  798 MFGEEALVVNLATSATAIAEGPVSCVGMDRAKFTE 832
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74913.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF87_9PHAE2.610e-1191.43Cyclic nucleotide-binding domain-containing protei... [more]
D8LF40_ECTSI9.120e-1188.57Putative two-pore calcium channel (Partial) (Fragm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 1..42
e-value: 1.1E-5
score: 27.0
NoneNo IPR availablePIRSRPIRSR000548-1PIRSR000548-1coord: 2..36
e-value: 2.2E-4
score: 18.4
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 1..36
score: 10.272799
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 1..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74913contigH-canaliculatus_M_contigs74913:227..352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74913.1.1mRNA_H-canaliculatus_M_contigs74913.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs74913 215..352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs74913.1.1 ID=prot_H-canaliculatus_M_contigs74913.1.1|Name=mRNA_H-canaliculatus_M_contigs74913.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=42bp
MFGEEGLVVNLATTATAVAEGPVSCVGMDRATFTEVRANAHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll