prot_H-canaliculatus_M_contigs749.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs749.1.1
Unique Nameprot_H-canaliculatus_M_contigs749.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length160
Homology
[Close]
BLAST of mRNA_H-canaliculatus_M_contigs749.1.1 vs. uniprot
Match: D8LF29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF29_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.630e-40
Identity = 80/160 (50.00%), Postives = 105/160 (65.62%), Query Frame = 0 
Query:    1 MVYLDLLRTNGWAELRPLSLDLPPCACCHQDISRGQQSEETRRTSRAHAGGHRC-GIIAQGIAGTVAEEDGVHRNRNDDDGPGAEVSTLKKVVFAVNAGCALPTRRFSDVVAAAEEYLLRLDASGTDARNDGRHLRSRVLAAFCDGSSIIYYSVSSGIDT 159
            ++++DL+R +GW ++R   L LPPC CC +D S GQ  +++ R      G +RC G IA G+  TV EE   +R+ +  D P    +    +VFAVNAG  +PTRRFSDVVAAAEE L R+D   T+ R+  +  R  VLAAFCDGSSIIYY+VSSGIDT
Sbjct:   16 LLHVDLVRKSGWTDVRSTLLHLPPCVCCRRDSSHGQPLQDSPRVPPEPGGNNRCCGKIAHGLVATVGEERNCNRDGDLGDVPVELPAASTTIVFAVNAGRTIPTRRFSDVVAAAEERL-RIDFRATEGRDQLQ--RPCVLAAFCDGSSIIYYTVSSGIDT 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs749.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF29_ECTSI1.630e-4050.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs749contigH-canaliculatus_M_contigs749:1277..3087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs749.1.1mRNA_H-canaliculatus_M_contigs749.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs749 1277..3114 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs749.1.1 ID=prot_H-canaliculatus_M_contigs749.1.1|Name=mRNA_H-canaliculatus_M_contigs749.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=160bp
MVYLDLLRTNGWAELRPLSLDLPPCACCHQDISRGQQSEETRRTSRAHAG
GHRCGIIAQGIAGTVAEEDGVHRNRNDDDGPGAEVSTLKKVVFAVNAGCA
LPTRRFSDVVAAAEEYLLRLDASGTDARNDGRHLRSRVLAAFCDGSSIIY
YSVSSGIDT*
back to top