prot_H-canaliculatus_M_contigs7482.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7482.1.1
Unique Nameprot_H-canaliculatus_M_contigs7482.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length176
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7482.1.1 vs. uniprot
Match: D7G8L3_ECTSI (Rad60-SLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L3_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.130e-49
Identity = 92/134 (68.66%), Postives = 107/134 (79.85%), Query Frame = 0 
Query:    1 SGPPVTLKVRVEGGKMFKVGTTMETKFSAFMEAFNEKVGVPSERASEAIFRFEGDRLNPEGSPEGEDMEQDDMIDVKFPHDLMGSIQAAPTELSLVAPKKKRVPRKPASKGKGASRGGGSTTAAALAATATPLG 134
            SG P+TLK+RVEGGK F V TT  TKFSAFMEAFNEKVG+P ERASE +F+F+GD+LNP+G+PEGEDME +++ID KFP D+M S+QAAPTELSL APKKK+VPRK   KGK A R    TTAAAL     PLG
Sbjct:  148 SGAPITLKLRVEGGKAFMVTTTTGTKFSAFMEAFNEKVGIPQERASECVFKFDGDKLNPDGTPEGEDMEPEEIIDAKFPADVMNSVQAAPTELSLAAPKKKKVPRKVPGKGKAAVR---KTTAAALXXXXKPLG 278
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BLAST of mRNA_H-canaliculatus_M_contigs7482.1.1 vs. uniprot
Match: A0A6H5L2P0_9PHAE (Rad60-SLD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P0_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 9.670e-43
Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 0 
Query:    1 SGPPVTLKVRVEGGKMFKVGTTMETKFSAFMEAFNEKVGVPSERASEAIFRFEGDRLNPEGSPEGEDMEQDDMIDVKFPHDLMGSIQAAPTELSLVAPKKKRVPRK 106
            SG P+TLK+RVEGGK F V TT  TKFSAFMEAFNEKVG+P ERASE +F+F+GD+LNP+G+PEGEDME +++ID KFP DLM S+QAAPTELSL APKKK VPRK
Sbjct:  319 SGAPITLKLRVEGGKAFMVTTTTGTKFSAFMEAFNEKVGIPQERASEGVFKFDGDKLNPDGTPEGEDMESEEIIDAKFPADLMNSVQAAPTELSLGAPKKK-VPRK 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7482.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8L3_ECTSI1.130e-4968.66Rad60-SLD domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L2P0_9PHAE9.670e-4374.53Rad60-SLD domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 6..76
e-value: 9.8E-11
score: 41.3
NoneNo IPR availableGENE3D3.10.20.90coord: 3..76
e-value: 2.5E-12
score: 49.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..161
NoneNo IPR availableCDDcd01763Ubl_SUMO_likecoord: 4..77
e-value: 3.30837E-12
score: 57.2049
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 3..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7482contigH-canaliculatus_M_contigs7482:7..2361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7482.1.1mRNA_H-canaliculatus_M_contigs7482.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7482 7..2361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7482.1.1 ID=prot_H-canaliculatus_M_contigs7482.1.1|Name=mRNA_H-canaliculatus_M_contigs7482.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=176bp
SGPPVTLKVRVEGGKMFKVGTTMETKFSAFMEAFNEKVGVPSERASEAIF
RFEGDRLNPEGSPEGEDMEQDDMIDVKFPHDLMGSIQAAPTELSLVAPKK
KRVPRKPASKGKGASRGGGSTTAAALAATATPLGRAAAATRSTRSGGARG
SRSGSRAASAAAAAAAAEPEIIVLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR022617Rad60/SUMO-like_dom