prot_H-canaliculatus_M_contigs7449.1.1 (polypeptide) Hapterophycus canaliculatus Oshoro7m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_M_contigs7449.1.1
Unique Nameprot_H-canaliculatus_M_contigs7449.1.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Sequence length173
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: D7FQD0_ECTSI (Smc4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD0_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 1.450e-74
Identity = 116/151 (76.82%), Postives = 128/151 (84.77%), Query Frame = 0
Query:   21 VAVATGCFRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGENANQIGARQTADLASAADAEAELLFRSVSSGVSDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRL 171
            +A  T  ++LQSV V+GF+SW  T  + F  +GLSCITGPNGSGKSTLLNAILFGLGENANQ+GA+Q A+LASAA AE ELLFR VS GVSD KVSSAVSRA GQRTYAFNGQ++PKHR    FDHFLRTRLGIATGNPFWRVSQDGIHRL
Sbjct:   27 IAAGTARYKLQSVTVSGFKSWTSTARVVFGHDGLSCITGPNGSGKSTLLNAILFGLGENANQLGAKQNAELASAAHAEVELLFRGVSRGVSDAKVSSAVSRANGQRTYAFNGQRLPKHR----FDHFLRTRLGIATGNPFWRVSQDGIHRL 173          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A836CK59_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK59_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 6.660e-14
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   30 LQSVKVAGFRSWKETQTISF-AQNGLSCITGPNGSGKSTLLNAILFGLGENANQIGARQTADLASAADAEAELLFRSVSSGVS----------------DVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
            L++V++  FRS+     +    + G++ + GPNG+GKSTLL AILF LG  A        +DLASA     E  F +                      +V V + V +ATG+R Y   GQK+P+ R    FD  L   LG++   PFW + Q+G+  ++
Sbjct:   21 LKTVRIEAFRSFVAPCIVEVDTKPGVTAVVGPNGAGKSTLLQAILFALGGKAASTRGASASDLASAPTLHVECTFVTTXXXXXXXXXXXXXXXXXXXXXEVSVGTRVCKATGERAYLVQGQKVPRKR----FDGALLA-LGLSVDAPFWHIRQNGMQSIL 175          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A1Z8RA52_9GAMM (Chromosome partition protein Smc n=1 Tax=Gammaproteobacteria bacterium TMED34 TaxID=1986761 RepID=A0A1Z8RA52_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 1.380e-6
Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   28 FRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGENA--NQIGARQTADLASAAD-------AEAELLFRSVSSGV-------SDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
             RLQ++K+AGF+S+ ++ T+SF  N L  + GPNG GKS +++A+ + +GE++  N  G   T  + + A        A  EL+F +    V       S+V V   VSR  GQ TY  N  +    R+    D FL T LG  +   +  + Q  I +L+
Sbjct:    1 MRLQAIKLAGFKSFVDSTTVSFPSN-LCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVIFNGASSRKPVGQASIELIFDNADGRVGGEFAAYSEVSVKRQVSR-DGQSTYFLNKNRC---RRKDITDLFLGTGLGPRS---YSIIEQGMISQLI 153          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A424L8A1_9GAMM (Chromosome partition protein Smc n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A424L8A1_9GAMM)

HSP 1 Score: 55.8 bits (133), Expect = 6.350e-6
Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   28 FRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGEN-ANQIGARQTADL----ASA----ADAEAELLFRSVSSGV-------SDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
             RLQ++K+AGF+S+ ++ T+SF  N L  + GPNG GKS +++A+ + +GE+ A  +     AD+    AS+      A  EL+F +    V       S+V V   VSR  GQ  Y  N  +    R+    D FL T LG  +   +  + Q  I +L+
Sbjct:    1 MRLQAIKLAGFKSFVDSTTVSFPSN-LCAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMADVIFNGASSRKPVGQASIELIFDNADGRVAGEFAAYSEVSVKRQVSR-DGQSXYFLNKNRC---RRKDITDLFLGTGLGPRS---YSIIEQGMISQLI 153          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A370CKH9_9COXI (Chromosome partition protein Smc n=1 Tax=Candidatus Aquirickettsiella gammari TaxID=2016198 RepID=A0A370CKH9_9COXI)

HSP 1 Score: 53.5 bits (127), Expect = 3.950e-5
Identity = 50/161 (31.06%), Postives = 83/161 (51.55%), Query Frame = 0
Query:   28 FRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGEN-ANQIGARQTADLA--------SAADAEAELLFRSVS-------SGVSDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
             RL+S+K+AGF+S+ +  T++F  N L+ I GPNG GKS +++AI + +GE+ A Q+  +   D+         +   A  EL F +         S  + + +   ++R  GQ  Y+ NG +    R+D + D FL T LG  +   +  + Q  I R+V
Sbjct:    1 MRLESIKLAGFKSFVDPTTVAFPSN-LTAIVGPNGCGKSNIIDAIRWVMGESSAKQLRGQSLDDVIFNGCKTRQALGKASIELNFDNADGKLGGQYSSYTQIAIRREMTRE-GQSIYSLNGTRC--RRRDIR-DIFLGTGLGPRS---YAIIEQGMISRIV 153          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A2Z5UU10_9COXI (Chromosome partition protein Smc n=2 Tax=Rickettsiella TaxID=59195 RepID=A0A2Z5UU10_9COXI)

HSP 1 Score: 53.1 bits (126), Expect = 5.350e-5
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 0
Query:   28 FRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGEN-ANQIGARQTADLA--------SAADAEAELLFRSVSSGV-------SDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
             RL+S+K+AGF+S+ +  T++F  N L+ I GPNG GKS +++AI + +GE+ A Q+  +   D+             A  EL F +   G+       + + +   ++R  GQ  Y  NG +    R+D + D FL T LG  +   +  + Q  I R+V
Sbjct:    1 MRLESIKLAGFKSFVDPTTLAFPSN-LTAIVGPNGCGKSNIIDAIRWVMGESSAKQLRGQSLDDVIFNGCTTRKPLGQAAIELNFDNSDGGLGGQYSSYAQISIRREITRE-GQSIYYLNGSRC--RRRDIR-DIFLGTGLGPRS---YAIIEQGMISRVV 153          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A1J8P5X9_9COXI (Chromosome partition protein Smc n=1 Tax=Candidatus Rickettsiella isopodorum TaxID=1225476 RepID=A0A1J8P5X9_9COXI)

HSP 1 Score: 52.8 bits (125), Expect = 7.250e-5
Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 0
Query:   28 FRLQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGEN-ANQIGARQTADLA--------SAADAEAELLFRSVSSGV-------SDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRLV 172
             RL+S+K+AGF+S+ +  T++F  N L+ I GPNG GKS +++AI + +GE+ A Q+  +   D+             A  EL F +  + +       + + +   ++R  GQ  Y+ NG +    R+D + D FL T LG  +   +  + Q  I R+V
Sbjct:    1 MRLESIKLAGFKSFVDPTTVAFPSN-LTAIVGPNGCGKSNIIDAIRWVMGESSAKQLRGQSLDDVIFNGCHTRKPLGKASIELNFDNSDASLGGQYNSYTQISIRREITRE-GQSIYSLNGTRC--RRRDIR-DIFLGTGLGPRS---YAIIEQGMISRIV 153          
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Match: A0A7R9KZZ3_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KZZ3_9ACAR)

HSP 1 Score: 52.4 bits (124), Expect = 9.570e-5
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0
Query:   30 LQSVKVAGFRSWKETQTISFAQNGLSCITGPNGSGKSTLLNAILFGLGENANQIGARQTADLASAADAEAELL-FRSVSSGVSDVKVSSAVSRATGQRTYA------FNGQKIPKHRQDHKFDHFLRTRLGIATGNPFWRVSQDGIHRL 171
            ++ + ++GFRS++ET TIS      + I G NG GKS +LNAI F L +  N + A Q   L + + ++  LL F  +    SD ++   V+    +R         F   KI  H       + L T  G +  NP++ + Q  ++ +
Sbjct:    3 IKKITISGFRSYRETNTISGLSARHNVIIGGNGCGKSNVLNAIQFVLSDEFNGLNANQRQQLINESHSQRLLLAFVEIVVDNSDRRIPLDVNDIAFRRQIGLKKDQYFMNNKIVTHSD---IVNMLET-AGFSRSNPYYIIKQGKVNEM 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7449.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FQD0_ECTSI1.450e-7476.82Smc4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A836CK59_9STRA6.660e-1433.13P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1Z8RA52_9GAMM1.380e-632.92Chromosome partition protein Smc n=1 Tax=Gammaprot... [more]
A0A424L8A1_9GAMM6.350e-632.92Chromosome partition protein Smc n=2 Tax=Gammaprot... [more]
A0A370CKH9_9COXI3.950e-531.06Chromosome partition protein Smc n=1 Tax=Candidatu... [more]
A0A2Z5UU10_9COXI5.350e-531.06Chromosome partition protein Smc n=2 Tax=Rickettsi... [more]
A0A1J8P5X9_9COXI7.250e-530.43Chromosome partition protein Smc n=1 Tax=Candidatu... [more]
A0A7R9KZZ3_9ACAR9.570e-528.86Hypothetical protein n=1 Tax=Medioppia subpectinat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 30..142
e-value: 2.5E-16
score: 59.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 28..165
e-value: 1.1E-19
score: 73.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 29..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7449contigH-canaliculatus_M_contigs7449:2029..5148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7449.1.1mRNA_H-canaliculatus_M_contigs7449.1.1Hapterophycus canaliculatus Oshoro7m malemRNAH-canaliculatus_M_contigs7449 2029..5148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_M_contigs7449.1.1 ID=prot_H-canaliculatus_M_contigs7449.1.1|Name=mRNA_H-canaliculatus_M_contigs7449.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp
MKRQGNRNGGEGAGKIVGGKVAVATGCFRLQSVKVAGFRSWKETQTISFA
QNGLSCITGPNGSGKSTLLNAILFGLGENANQIGARQTADLASAADAEAE
LLFRSVSSGVSDVKVSSAVSRATGQRTYAFNGQKIPKHRQDHKFDHFLRT
RLGIATGNPFWRVSQDGIHRLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003395RecF/RecN/SMC_N