mRNA_H-canaliculatus_M_contigs9964.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs9964.1.1
Unique NamemRNA_H-canaliculatus_M_contigs9964.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: PseudoU_synth_2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN60_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 5.820e-149
Identity = 206/232 (88.79%), Postives = 218/232 (93.97%), Query Frame = 1
Query:   10 GKGNDVPTEEIWLNGPFKAPMPPGPLDILFMDSDIVVANKPSNLLCVPGRDEKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            GKG  V  EE+WLNGPF AP+PPGPLDILF+D +IVV NKPS+LLCVPGR EKDSLATRAAL LGHYRVDRMIVHRLDMATSGCVIMART+AALKDLNRQFRER+VRKRYVAMVHGVL ADEGEVDLPLCRN G PPLHMVNFEHGKPSLTKWRVLERAAD+TRVELIPVSGRSHQLRLHM+AIGHPILGDHFYGTK+SL LADRCLLHAHTLC+RHP TGERT+FTAPCEF
Sbjct:   99 GKGKGVAAEEMWLNGPFNAPVPPGPLDILFVDEEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAMVHGVLWADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLERAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTKDSLDLADRCLLHAHTLCLRHPKTGERTMFTAPCEF 330          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridylate (synthases, 23S RNA-specific n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR37_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.620e-147
Identity = 202/235 (85.96%), Postives = 218/235 (92.77%), Query Frame = 1
Query:    1 DARGKGNDVPTEEIWLNGPFKAPMPPGPLDILFMDSDIVVANKPSNLLCVPGRDEKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            +A GKG  V  EE+WLNGPF AP+PPGPL+ILF+D +IVV NKPS+LLCVPGR EKDSLATRAAL LGHYRVDRMIVHRLDMATSGCVIMART+AALKDLNRQFRER+VRKRYVA+VHGVL ADEGEVDLPLCRN G PPLHMVNFEHGKPSLTKWRVL+RAAD+TRVELIPVSGRSHQLRLHM+AIGHPILGDHFYGT +SL LA RCLLHAHTLC+RHP TGERT+FTAPCEF
Sbjct:   22 EAGGKGKGVAAEEMWLNGPFNAPVPPGPLEILFVDEEIVVCNKPSDLLCVPGRIEKDSLATRAALELGHYRVDRMIVHRLDMATSGCVIMARTDAALKDLNRQFRERQVRKRYVAIVHGVLWADEGEVDLPLCRNRGCPPLHMVNFEHGKPSLTKWRVLDRAADRTRVELIPVSGRSHQLRLHMNAIGHPILGDHFYGTTDSLALAGRCLLHAHTLCLRHPKTGERTMFTAPCEF 256          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridylate (synthase, 23S RNA-specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD05_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.870e-66
Identity = 111/214 (51.87%), Postives = 138/214 (64.49%), Query Frame = 1
Query:   79 GPLDILFMDSDIVVANKPSNLLCVPGRDEKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLER-----AADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            GP+D+++ D  I+V NKPS LL VPG   KD L +R A+  G  R+D+M+VHRLD ATSG V+ ART+ AL+ L+  FR R V K Y A+V+G +  D GEV  P+ ++  +PPL +++   GKP  T W VL R      AD TRV L PV+GRSHQLRLHM  +GHPILGD  Y    +  LA RCLLHA TL  RHP TGE   F  P EF
Sbjct:   14 GPVDVVYSDDHIIVCNKPSGLLSVPGITLKDCLVSRVAVKFGQARIDKMVVHRLDQATSGLVLFARTDEALRALHEDFRLRRVSKCYEAVVYGSVAGDSGEVTEPMRKDMDNPPLQLIDHVQGKPCQTLWSVLSRETRGGGADATRVALTPVTGRSHQLRLHMQVLGHPILGDDLYAHAAARALAPRCLLHARTLRFRHPATGEDLSFEVPPEF 227          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: bifunctional (tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA n=1 Tax=Marinobacter nauticus TaxID=2743 RepID=UPI001C984345)

HSP 1 Score: 205 bits (522), Expect = 3.100e-63
Identity = 114/218 (52.29%), Postives = 145/218 (66.51%), Query Frame = 1
Query:   58 FKAPMPPGPLDILFMDSDIVVANKPSNLLCVPGRD--EKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            ++ P+ P  L +L+ D DIVV +KPS LL VPGRD   +DS+  R     G        VHRLDMATSG +++A  + A ++L RQFRERE  K YVA V G L   EGEVDLPL  +  + P  MV FE+GKPSLT++RV+      + VEL P++GRSHQLR+HM A+GHPILGD FY  +E+L  +DR LLHAHTLC++ P +GE   FTAP  F
Sbjct:    6 YQPPLEPF-LTVLYEDKDIVVVDKPSGLLSVPGRDPAHRDSIYARVEQRYGKV----YDVHRLDMATSGVMVLALRKNAERELKRQFRERETSKSYVARVWGHLAQPEGEVDLPLICDWPNRPKQMVCFENGKPSLTQYRVMSEDERSSLVELTPITGRSHQLRVHMLALGHPILGDSFYAHEEALAASDRLLLHAHTLCIKQPYSGEPLSFTAPVPF 218          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: RluA (family pseudouridine synthase n=1 Tax=Kordiimonas gwangyangensis TaxID=288022 RepID=UPI000371F359)

HSP 1 Score: 205 bits (522), Expect = 3.200e-63
Identity = 112/210 (53.33%), Postives = 141/210 (67.14%), Query Frame = 1
Query:   82 PLDILFMDSDIVVANKPSNLLCVPGRDEK--DSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            PLDI+ +D DI+V NKP+ LL VPGR E+  D LATRA       R    IVHRLDM TSG +IMAR   AL+ L RQF +R+  K Y A+++G L  DEGEVDLPL  +  + P H V+FE+GKP+ T+++V+ER    TRV L PV+GRSHQLR+HM ++GH I+GD+ Y   E+  LADR  LHA  L V HP +GE   FTAP  F
Sbjct:   15 PLDIIHVDDDILVLNKPNGLLSVPGRTEEKFDCLATRAEAEFTGVR----IVHRLDMETSGVIIMARHMDALRHLGRQFEDRKTDKVYEALIYGNLARDEGEVDLPLLVDWPNRPKHRVDFENGKPAFTRYKVIERTEKTTRVALYPVTGRSHQLRVHMLSLGHAIIGDNLYAEGEAFTLADRLCLHARELTVTHPESGESLTFTAPVPF 220          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridine (synthase n=1 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WRJ6_9GAMM)

HSP 1 Score: 203 bits (516), Expect = 1.660e-62
Identity = 104/209 (49.76%), Postives = 146/209 (69.86%), Query Frame = 1
Query:   85 LDILFMDSDIVVANKPSNLLCVPGR--DEKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            +++L+ D  +V+A KP++LL VPGR  + +D L  R        R    IVHRLD ATSG +++A    + ++L+RQF +RE RKRY+A+V G L   +G V+LPL  +  + P  MV+ + GKP+LT++R+L++A D++RVELIP++GRSHQLR+HM A+GHPILGD FY T  +L  ADR  LHA  L +RHP++GER  FTAPC F
Sbjct:    2 IEVLYQDDSLVIAVKPADLLSVPGRGPENQDCLLHRLQSEFPTAR----IVHRLDCATSGVMVLALDADSHRELSRQFHDRETRKRYIAVVDGTLKQHQGRVELPLRCDWPNRPKQMVDHDQGKPALTEYRLLDQADDRSRVELIPITGRSHQLRVHMQALGHPILGDRFYATPSALAKADRLNLHAEQLGIRHPVSGERMEFTAPCPF 206          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridine (synthase n=4 Tax=Zobellella denitrificans TaxID=347534 RepID=A0A291HLR0_9GAMM)

HSP 1 Score: 203 bits (517), Expect = 2.010e-62
Identity = 110/223 (49.33%), Postives = 146/223 (65.47%), Query Frame = 1
Query:   58 FKAPMPPGPLDILFMDSDIVVANKPSNLLCVPGRD--EKDSLATRAALHLGHYRVDRM-----IVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            +  PM P   ++L+ D+ ++V NKPS LL VPGR+   +DSL+         YRV R+     +VHRLDMATSG ++MA    A ++L+RQFRERE  KRY A VHG L  D G +DLPLC +  + P HMV+ EHGKP+LT WR L R  D++ VEL P++GRSHQLR+HM ++GHPILGD+ Y + E+L +A    LHA  L  RHP + +   F+AP  F
Sbjct:    6 YDPPMDPQ-FEVLYQDNSLIVLNKPSGLLSVPGRELIHRDSLS---------YRVARVYPGVQVVHRLDMATSGVIVMALHPKAHRELSRQFRERETAKRYYAWVHGRLEQDAGSIDLPLCCDWPNRPRHMVSLEHGKPALTHWRCLRREPDRSLVELTPITGRSHQLRVHMLSLGHPILGDNLYASGEALAMAPHLQLHAAWLAFRHPRSKQWLEFSAPAPF 218          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridine (synthase n=4 Tax=Oceanimonas TaxID=129577 RepID=A0A233RBH1_9GAMM)

HSP 1 Score: 199 bits (506), Expect = 8.710e-61
Identity = 107/208 (51.44%), Postives = 134/208 (64.42%), Query Frame = 1
Query:   88 DILFMDSDIVVANKPSNLLCVPGRDEK--DSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            DIL+ D  ++V NKPS LL VPGRD    DSL+ R +      +V    VHRLDMATSG ++MA    A ++L+RQFRERE  KRY A VHG    DEG +DLPLC +  + P HMV+ EHGK +LT WR L R   ++ +EL P++GRSHQLR+HM ++GHPILGD+ Y   E+L +A    LHA  L  RHP    R  FTAP  F
Sbjct:   15 DILYQDDSLIVLNKPSGLLSVPGRDPVHFDSLSLRVSRVFPAVQV----VHRLDMATSGVIVMALNPKAHRELSRQFRERETEKRYYAWVHGQPSEDEGSIDLPLCCDWPNRPRHMVSHEHGKKALTHWRCLRREGQRSLMELTPITGRSHQLRVHMLSLGHPILGDNLYAEGEALTMAPHLQLHAAWLAFRHPRYKHRLEFTAPAPF 218          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: Pseudouridine (synthase n=1 Tax=Zobellella taiwanensis TaxID=347535 RepID=A0A2P7QL36_9GAMM)

HSP 1 Score: 199 bits (505), Expect = 1.310e-60
Identity = 105/208 (50.48%), Postives = 138/208 (66.35%), Query Frame = 1
Query:   88 DILFMDSDIVVANKPSNLLCVPGRD--EKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            ++L+ D+ ++V NKPS LL VPGR+   +DSL+ R A        D  +VHRLDMATSG ++MA    A ++L+RQFRERE  KRY A V+G   AD G VDLPLC +  + P HMV+ EHGKP+LT WR L R   ++ +EL P++GRSHQLR+HM ++GHPILGD+ Y + E+L +A +  LHA  L  RHP       FTAP  F
Sbjct:   15 EVLYQDNSLIVLNKPSGLLSVPGREAVHRDSLSYRVA----RVYPDVQVVHRLDMATSGVIVMALHPKAHRELSRQFRERETEKRYYAWVYGSPAADAGSVDLPLCCDWPNRPRHMVSLEHGKPALTHWRCLRREPGRSLLELTPITGRSHQLRVHMLSLGHPILGDNLYASGEALTMAPQLQLHAAHLAFRHPRYRHWLEFTAPAPF 218          
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Match: RNA (pseudouridine synthase n=1 Tax=Paremcibacter congregatus TaxID=2043170 RepID=A0A2G4YMN5_9PROT)

HSP 1 Score: 198 bits (504), Expect = 1.490e-60
Identity = 105/218 (48.17%), Postives = 138/218 (63.30%), Query Frame = 1
Query:   58 FKAPMPPGPLDILFMDSDIVVANKPSNLLCVPGRDE--KDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDLNRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGKPSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTKESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF 705
            F+   P  PL +L  D DIVV NKPS LL VPGR E  KDSL+ R             +VHRLDM TSG ++MA    A + ++ QF +R   K Y+A +HG +  +EGE+DLPL  +  + P HMV+ E+GK +LT+W++L R    TRV   PV+GR+HQLR+H  AIGHPILGD  Y T+E+L +ADR LLHA  L + HP + E+  F+ P EF
Sbjct:    3 FEYAPPTTPLQVLHQDKDIVVLNKPSGLLSVPGRQEHMKDSLSLRVQAQFP----TATVVHRLDMDTSGIIVMALNIEAHRHISMQFEKRYTEKSYIAHLHGAVADEEGEIDLPLILDWPNRPHHMVDHENGKQALTRWKILARGDGFTRVAFYPVTGRTHQLRVHSQAIGHPILGDTLYATEEALKMADRLLLHAEVLTITHPYSKEKMTFSTPAEF 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9964.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PseudoU_synth_25.820e-14988.79domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Pseudouridylate1.620e-14785.96synthases, 23S RNA-specific n=1 Tax=Ectocarpus sil... [more]
Pseudouridylate1.870e-6651.87synthase, 23S RNA-specific n=1 Tax=Tribonema minus... [more]
bifunctional3.100e-6352.29tRNA pseudouridine(32) synthase/23S rRNA pseudouri... [more]
RluA3.200e-6353.33family pseudouridine synthase n=1 Tax=Kordiimonas ... [more]
Pseudouridine1.660e-6249.76synthase n=1 Tax=Motiliproteus coralliicola TaxID=... [more]
Pseudouridine2.010e-6249.33synthase n=4 Tax=Zobellella denitrificans TaxID=34... [more]
Pseudouridine8.710e-6151.44synthase n=4 Tax=Oceanimonas TaxID=129577 RepID=A0... [more]
Pseudouridine1.310e-6050.48synthase n=1 Tax=Zobellella taiwanensis TaxID=3475... [more]
RNA1.490e-6048.17pseudouridine synthase n=1 Tax=Paremcibacter congr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs9964contigH-canaliculatus_M_contigs9964:170..2647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LR37
PFAMsPseudoU_synth_2
Model size708
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.66e-148
EggNOG OGsCOG0564@1|root,KOG1919@2759|Eukaryota
Ec32 ortholog descriptionPseudouridine synthase, RsuA/RluB/C/D/E/F
Ec32 orthologEc-06_004490.1
Descriptionpseudouridine synthase activity
Cds size708
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs9964.1.1prot_H-canaliculatus_M_contigs9964.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs9964 170..2647 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854236.747901-CDS-H-canaliculatus_M_contigs9964:169..3371696854236.747901-CDS-H-canaliculatus_M_contigs9964:169..337Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 170..337 -
1696854236.7659225-CDS-H-canaliculatus_M_contigs9964:703..7761696854236.7659225-CDS-H-canaliculatus_M_contigs9964:703..776Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 704..776 -
1696854236.7824142-CDS-H-canaliculatus_M_contigs9964:1192..13501696854236.7824142-CDS-H-canaliculatus_M_contigs9964:1192..1350Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 1193..1350 -
1696854236.796486-CDS-H-canaliculatus_M_contigs9964:1666..17901696854236.796486-CDS-H-canaliculatus_M_contigs9964:1666..1790Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 1667..1790 -
1696854236.8111625-CDS-H-canaliculatus_M_contigs9964:2079..21771696854236.8111625-CDS-H-canaliculatus_M_contigs9964:2079..2177Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 2080..2177 -
1696854236.8270488-CDS-H-canaliculatus_M_contigs9964:2560..26471696854236.8270488-CDS-H-canaliculatus_M_contigs9964:2560..2647Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs9964 2561..2647 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs9964.1.1

>prot_H-canaliculatus_M_contigs9964.1.1 ID=prot_H-canaliculatus_M_contigs9964.1.1|Name=mRNA_H-canaliculatus_M_contigs9964.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=236bp
DARGKGNDVPTEEIWLNGPFKAPMPPGPLDILFMDSDIVVANKPSNLLCV
PGRDEKDSLATRAALHLGHYRVDRMIVHRLDMATSGCVIMARTEAALKDL
NRQFREREVRKRYVAMVHGVLPADEGEVDLPLCRNSGSPPLHMVNFEHGK
PSLTKWRVLERAADKTRVELIPVSGRSHQLRLHMDAIGHPILGDHFYGTK
ESLVLADRCLLHAHTLCVRHPITGERTIFTAPCEF*
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mRNA from alignment at H-canaliculatus_M_contigs9964:170..2647-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs9964.1.1 ID=mRNA_H-canaliculatus_M_contigs9964.1.1|Name=mRNA_H-canaliculatus_M_contigs9964.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2478bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9964:170..2647- (Hapterophycus canaliculatus Oshoro7m male)
GACGCAAGAGGGAAGGGGAACGACGTTCCTACCGAGGAGATATGGCTGAA CGGTCCATTCAAGGCCCCGATGCCGCCAGGACCCTTGGTGAGTTTGACTG AGTCAGGTGCGCCTACAGGACAGTGGTCTACGGCATTAGACTAGTCTGAA AGAACAACATTCCGGTGCGCTTGTGACATGTTAAATGGCAGCTCTATCCT TTTTCATGCCGAGATACAGAATGTGGTGTGGTGCTAATGATTTTACCGCA TCAGGCTGCGGCGGCAGCGCGTACAGCGCCCACCGACCAGCTGCGAGAGC AGTTTCAGTGTTGTCATCCACAACGAGTAGCACCATGGCATGACCGCGAA AGGATGGGGCAACGTGAAAAGATCTCGAAAACGGCATGTCCGAAGTCCGA AGGGATGACATCGTGAAGTGCGTCCAAGTATTCACCTGCGTCTCTGGGTT CTTGCTCGTGTACGCCTCAGGACATACTCTTCATGGACAGCGATATCGTG GTCGCCAACAAGCCGAGCAATCTGCTCTGCGTGCCGGGGAGAGACGAGAA AGACTCGCTTGCCACAAGGTCTGCCTAACAAATGGTCGTTTTTGGCCTCT ACTTCCTGCTCTACTGCTTATCTAGGAGCATGTTCCTGTTCCTGTTGACA TTTTAAGAGATGTCGGCAGCGTTCACACCAATTCCACAGCGTTCGTTTTG TCCTGTCGATTGGCTAGTCATCAGCGTGCTGCTTTCACTGTTGAAGCCTT GCTGGCTGCTTCCCCATAAAATGTACTTTAAGCGAAGCTTGATGGCGATC TTCAAATCTTCGTTACACTTCCCTCGTCCTAAAACTGCTTTGTTCACTTC TGTACAGGGCTGCCCTGCACCTCGGCCACTACCGTGTTGACAGAATGATC GTGCACCGGCTAGACATGGCCACTTCTGGTTGCGTCATCATGGCCCGCAC GGAAGCTGCTCTTAAGGACCTGAACCGACAGGTACACCATGTTGTGAATC GTGACCCGTTGTAATGCACGTGACAGCCGATGGTTTCCGTTTCAGGGGAT TTCTGTATGCGTAATCAGCAGACTCCTCCGCTGTTCCTACACGTCGTGCA GCAGTCGCTGTATTGTGTTGTTATGCCCACGCGTTGATTAACCATCTCGC TTCTAGTGTGAACGCCCTCCACCGTCTCCCCTCTATCGTTGGTGTTGCGT GATGTGTTGCTTTTCGCGCTCTGGATGCTACTTGCCCATGGTGACCTGTG CTTTGTGGGTCTCTTCGCATACGTGCTTGCCATGTGAACGTGTGCAGTTC CGAGAGCGCGAGGTGCGAAAACGCTACGTGGCTATGGTGCACGGCGTTCT TCCCGCCGACGAAGGGGAGGTCGATCTTCCCCTTTGCAGAAATAGTGGTA GCCCCCCACTCCATATGGTCAACTTCGAGCACGGGAAGCCTTCGCTCACA AAGTGGTCAGTGAAGCAGATGCGCGGCTTCGTTAGGAGATAAATGTTAGC CGTCAGTGGAGGGATATGGGCCAGTTGCGTTCGGTTGGTCAATTTCACTA CTACGATGCCTGGTATTTTTGCCAGCGCAAAATCTGTGGGCCTTCACCCA AATCGTGCTCCAGGCTCGTGTTTTATGACGCACACGGCCCAATTGCGTTA TGCCGAACCTTATTCTGCTTTCGCGTCTACCTTTGTACGGCACTTCGGTT TTGACAAGTAGTGCAGCATGTTTGATGGCCGCAGTTTCTCGCACCTTCCG TAAAGTTGCCTCCTTGAGCGATGGTATATGCTTCTTAACTCGATCAATTA CTTTGACTCTCGCTACTGTACGAATCCGCGTTCCTTCTGGCTTGACGGCC TCAAATGTGTCACGCGCATAGGCGAGTCCTGGAAAGGGCTGCTGACAAGA CGAGAGTGGAGCTCATCCCCGTGTCGGGCCGTTCCCACCAGTTGGTGAGG AAAGAAGAGGGAGTGCGAGAGACAGACGCGGACGAGCAAACACATTCCGA TACAAGTTGTATAACATTCCGATATCCCTCGCTCTTGTTCAATCTGGTAT GCGGTGGTTGGATCTTTACTTTGGTCACGGGTAGCTTTGCCGCACCAACA GATTTCCCTCGCATTTTACGAAGACAGATTTCCCTCGCATTTTACGAAGA CCAAGTCTTGCTAAATTTCAATGCGAAGAAAAAGAACGTATCATAGTACG CGAAGTAACGAACCCATTTGAAGTCGCCCGGACGCATGTCGGCCAAGCGA AGCTCAGTAGACAGTGACGCCATTCACCCTTCGCCTTTCACGCTACGCCC CTCTGGACAGCGACTTCATATGGACGCAATAGGCCATCCTATACTGGGCG ACCACTTCTACGGTACCAAGGAATCTCTCGTCCTCGCGGACAGGTGCCTG TTGCACGCACACACGCTTTGCGTTCGACACCCGATAACGGGGGAGAGAAC GATATTCACCGCTCCTTGCGAGTTCTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9964:170..2647-

>mRNA_H-canaliculatus_M_contigs9964.1.1 ID=mRNA_H-canaliculatus_M_contigs9964.1.1|Name=mRNA_H-canaliculatus_M_contigs9964.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=708bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9964:170..2647- (Hapterophycus canaliculatus Oshoro7m male)
GACGCAAGAGGGAAGGGGAACGACGTTCCTACCGAGGAGATATGGCTGAA
CGGTCCATTCAAGGCCCCGATGCCGCCAGGACCCTTGGACATACTCTTCA
TGGACAGCGATATCGTGGTCGCCAACAAGCCGAGCAATCTGCTCTGCGTG
CCGGGGAGAGACGAGAAAGACTCGCTTGCCACAAGGGCTGCCCTGCACCT
CGGCCACTACCGTGTTGACAGAATGATCGTGCACCGGCTAGACATGGCCA
CTTCTGGTTGCGTCATCATGGCCCGCACGGAAGCTGCTCTTAAGGACCTG
AACCGACAGTTCCGAGAGCGCGAGGTGCGAAAACGCTACGTGGCTATGGT
GCACGGCGTTCTTCCCGCCGACGAAGGGGAGGTCGATCTTCCCCTTTGCA
GAAATAGTGGTAGCCCCCCACTCCATATGGTCAACTTCGAGCACGGGAAG
CCTTCGCTCACAAAGTGGCGAGTCCTGGAAAGGGCTGCTGACAAGACGAG
AGTGGAGCTCATCCCCGTGTCGGGCCGTTCCCACCAGTTGCGACTTCATA
TGGACGCAATAGGCCATCCTATACTGGGCGACCACTTCTACGGTACCAAG
GAATCTCTCGTCCTCGCGGACAGGTGCCTGTTGCACGCACACACGCTTTG
CGTTCGACACCCGATAACGGGGGAGAGAACGATATTCACCGCTCCTTGCG
AGTTCTGA
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