mRNA_H-canaliculatus_M_contigs9240.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJW9_9PHAE) HSP 1 Score: 305 bits (780), Expect = 7.290e-101 Identity = 153/214 (71.50%), Postives = 176/214 (82.24%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGE--VESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSFLKKMEAAGGPLGD 636
AGPVVAAAC +P +VNI GIQDSKK+ +HSDRE L+K+LT++PGVIWAT+EVGS RIDEINILEATKEAMT C LEVCSK+ E ++ + K + KPFVLVDGNFTPPGLG+ VE++CVVGGDGLEYCIAAASIIAKVTRDRLMI+FGERWPV+GFERHKGYGT AHR+AIREHGMVEIHRRSFLK ME++GG L +
Sbjct: 142 AGPVVAAACMIPPDVNILGIQDSKKITQHSDRETLFKELTETPGVIWATSEVGSSRIDEINILEATKEAMTNCVLEVCSKSVEPSANKGMKTNWKKNA----------SDKKPFVLVDGNFTPPGLGDAKVEAECVVGGDGLEYCIAAASIIAKVTRDRLMIEFGERWPVFGFERHKGYGTAAHRDAIREHGMVEIHRRSFLKNMESSGGKLAE 345
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease ((Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RCY3_SELML) HSP 1 Score: 168 bits (426), Expect = 2.400e-49 Identity = 92/199 (46.23%), Postives = 119/199 (59.80%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPVVAAAC +P +V+I GI DSKK+ RE LY +T +PGV ++ V + RIDEINIL+AT EAM C E+ + P++L+DGN P GL ++ VV GD + IAAASI+AKVTRDRLM D+ +RWP+YGF+ HKGYGT +H A+ +HG +IHRRSF
Sbjct: 15 AGPVVAAACIIPEDVDIQGIDDSKKLTAEK-REQLYSQITSTPGVRFSICVVDAPRIDEINILQATMEAMETCVEELTGNGRDHP---------------------------PYILIDGNRIPGGLSGKHARSVVKGDAESHVIAAASILAKVTRDRLMEDYDKRWPLYGFKDHKGYGTASHTAALLKHGPCDIHRRSF 185
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XCN5_MARPO) HSP 1 Score: 160 bits (406), Expect = 6.390e-45 Identity = 95/199 (47.74%), Postives = 124/199 (62.31%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPVVAAAC +PS VNI GI DSKK+ + RE LY+ +T +PG+ +A V + IDE+NIL+AT +AM+ C ++V S AS+ EN + F+LVDGN P G E S+ VV GD + IAAASI+AKVTRDRLM+ + + WP YGF+ HKGYGT H A+ ++G +IHRRSF
Sbjct: 126 AGPVVAAACIIPSSVNIEGIDDSKKLTE-AKREELYEKITSTPGISYAIHVVDAAIIDEVNILQATMQAMSAC-VQVLSCASQ----ENPR--------------------PDFILVDGNRLPDGFPE-NSRSVVKGDAVCQVIAAASILAKVTRDRLMLSYDKTWPNYGFKAHKGYGTATHMAALLKYGPCDIHRRSF 297
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L292_PHYPA) HSP 1 Score: 160 bits (406), Expect = 1.240e-44 Identity = 88/199 (44.22%), Postives = 118/199 (59.30%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPVVAAAC +P+ IPG+ DSKK+ + RE LY + +PGV +A V + +IDEINIL+AT AM+ C ++ + A ++L+DGN P L + E++ V+ GD + IAAASI+AKVTRDR+M+D+ RWPVYGF+ HKGYGT AH A+ HG +IHRRSF
Sbjct: 156 AGPVVAAACIIPASATIPGVDDSKKLTE-AQREELYAQIVATPGVAYAIHVVDAAKIDEINILQATLLAMSTCVKKLRKERGGEAP--------------------------DYILIDGNRIPDELSKEEAQFVIKGDAECHVIAAASILAKVTRDRMMVDYDRRWPVYGFKAHKGYGTAAHIGALLNHGPCDIHRRSF 327
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDA0_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.600e-44 Identity = 98/207 (47.34%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF--LKKMEA 615
AGPVVAAAC VP +V I G+ DSKK++ RE L++ LT+ P + +A ++RIDEINIL+A+ E+MTK EV K + K FVLVDGN PP L E+ ++ VV GD Y IAAASIIAKVTRDRLM ++ E++P YG +HKGY T+AH AI +HG EIHR +F LK EA
Sbjct: 91 AGPVVAAACHVPLDVTIEGVDDSKKISE-PQREELFELLTNHPKITYAVHVNSAQRIDEINILQASLESMTKSVNEVAEKLQQ---------------------------DKTFVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRAHVAAIAKHGPCEIHRMTFAPLKPKEA 268
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z1P2_PHYSP) HSP 1 Score: 158 bits (399), Expect = 1.620e-44 Identity = 97/207 (46.86%), Postives = 124/207 (59.90%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF--LKKMEA 615
AGPVVAAAC VP +V I G+ DSKK++ REAL++ LT+ P + +A ++RIDEINIL+A+ E+MTK A EV + + K FVLVDGN PP L E+ ++ VV GD Y IAAASIIAKVTRDRLM ++ E++P YG +HKGY T+ H AI +HG IHR +F LK EA
Sbjct: 64 AGPVVAAACHVPLDVTIEGVDDSKKISE-PQREALFELLTNHPSITYAVHVNSAQRIDEINILQASLESMTKSANEVAERLQQT--------------------------DKTFVLVDGNKLPPTL-ELPAEAVVKGDSKVYSIAAASIIAKVTRDRLMREYDEQYPQYGLAKHKGYPTRDHVAAIAKHGPCAIHRMTFAPLKPKEA 242
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=12 Tax=Phytophthora TaxID=4783 RepID=W2QYI7_PHYPN) HSP 1 Score: 159 bits (401), Expect = 1.680e-44 Identity = 96/206 (46.60%), Postives = 122/206 (59.22%), Query Frame = 1
Query: 4 GPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF--LKKMEA 615
GPVVAAAC VP +V IPG+ DSKK+ REAL++ LT P + +A ++RIDEINIL+A+ E+MTK EV + + K FVLVDGN PP L E+ ++ V+ GD Y IAAASIIAKVTRDRLM ++ E++P YG +HKGY T+ H AI +HG EIHR +F LK EA
Sbjct: 92 GPVVAAACHVPLDVTIPGVDDSKKILE-PQREALFELLTTHPSITYAVHVNSAQRIDEINILQASLESMTKSVNEVAERLQQK--------------------------DKTFVLVDGNKLPPTL-ELPAEAVIKGDSKVYSIAAASIIAKVTRDRLMREYDEKFPQYGLAQHKGYPTRGHVAAIAKHGPCEIHRMTFAPLKPKEA 269
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH6_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.030e-43 Identity = 91/200 (45.50%), Postives = 119/200 (59.50%), Query Frame = 1
Query: 1 AGPVVAAACFVPSE-VNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPV AAA +P+ + I G+ DSK +A +RE LY++LT G +W+ ++RIDEINIL+AT E+M A +V + AA K VL+DGN P + E+ ++C++ GDG EY IAAASIIAKVTRDRLM + E++P YGFERHKGYGT AH AI +HG IHR +F
Sbjct: 33 AGPVCAAAYALPATGLRIAGVVDSKLIAE-PERERLYEELTAVRGALWSATVTSAQRIDEINILQATMESMQISAHDVMRQCPPAA--------------------------KAAVLIDGNRVPDNM-ELPAECIIKGDGKEYSIAAASIIAKVTRDRLMRQYHEQYPAYGFERHKGYGTAAHMAAIAQHGACPIHRMTF 204
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4C1_KLENI) HSP 1 Score: 154 bits (389), Expect = 4.980e-43 Identity = 92/199 (46.23%), Postives = 112/199 (56.28%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFVLVDGNFTPPGLGEVESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPVVAAAC +P IPG+ DSKKV+ ++R+ LY +T++PGV +A + V ID+INILEA AM V + F LVDGN P L SK +VGGD L IAAASIIAKVTRDRLM +F E+WP YGF+ HKGYGT AH E ++ G V IHRR+F
Sbjct: 68 AGPVVAAACILPPNFEIPGVDDSKKVSE-ANRDRLYDIITNAPGVEFAVSVVDVETIDQINILEAAMLAMANAVKLVRAD---------------------------------FALVDGNRIPKQLAASVSKAIVGGDALSTSIAAASIIAKVTRDRLMCEFHEQWPEYGFKAHKGYGTAAHMEVLKRLGPVVIHRRTF 232
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Match: Ribonuclease (n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FES7_VITBC) HSP 1 Score: 157 bits (396), Expect = 7.780e-43 Identity = 95/204 (46.57%), Postives = 119/204 (58.33%), Query Frame = 1
Query: 1 AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAEVGSRRIDEINILEATKEAMTKCALEVCSKASEAASCENKKGXXXXXXXXXXXXXXXNTGTKPFV--LVDGNFTPPGLGE---VESKCVVGGDGLEYCIAAASIIAKVTRDRLMIDFGERWPVYGFERHKGYGTKAHREAIREHGMVEIHRRSF 597
AGPVVAAAC +P V++P I+DSK + ++REA+Y+ LT P V+WAT V + ID INIL+AT +AMT A V + + +G KP V LVDGN PP L + V VV GD EY IAAASIIAKVTRDR+M + E P YGF +HKGY TK H EA+ G++ IHR+SF
Sbjct: 135 AGPVVAAACHIPLGVDLPAIRDSKAIKTEAEREAIYEKLTAHPDVVWATHAVDNNEIDRINILQATFKAMTPAAQSVIEQLA-------------------------TSGVKPSVAVLVDGNQLPPVLKDDPNVGCHAVVRGDSKEYVIAAASIIAKVTRDRVMNAYDEEHPGYGFAQHKGYPTKGHIEALSRLGVLPIHRKSF 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9240.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9240.2.1 >prot_H-canaliculatus_M_contigs9240.2.1 ID=prot_H-canaliculatus_M_contigs9240.2.1|Name=mRNA_H-canaliculatus_M_contigs9240.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=216bp AGPVVAAACFVPSEVNIPGIQDSKKVARHSDREALYKDLTDSPGVIWATAback to top mRNA from alignment at H-canaliculatus_M_contigs9240:2484..4636- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9240.2.1 ID=mRNA_H-canaliculatus_M_contigs9240.2.1|Name=mRNA_H-canaliculatus_M_contigs9240.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2153bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9240:2484..4636- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9240:2484..4636- >mRNA_H-canaliculatus_M_contigs9240.2.1 ID=mRNA_H-canaliculatus_M_contigs9240.2.1|Name=mRNA_H-canaliculatus_M_contigs9240.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=648bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9240:2484..4636- (Hapterophycus canaliculatus Oshoro7m male)back to top |