mRNA_H-canaliculatus_M_contigs9196.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT3_ECTSI) HSP 1 Score: 262 bits (670), Expect = 4.080e-84 Identity = 140/192 (72.92%), Postives = 153/192 (79.69%), Query Frame = 1
Query: 1 EACQKHLTEALRAERPRRLLEAIEQGLSRKDEEGGRGAGDGQRDSPSG---SGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGPH 567
+ CQKHL E LRAERPRRLLEAI+QGLS K +G GDG+ + G LRL CQ CP G PAA ARAYLEAPPPG+VLCANRLGSR EVEEAVVHELVHAYDYLVAG+ELLDC++LAYSEVRAARAAECSK SRS VCSYF+K+C RSTA RSTEGLFPG+G GCVDAVF+ AYQDQ PH
Sbjct: 4 QTCQKHLAEVLRAERPRRLLEAIQQGLSGK----AKGGGDGKEEGTEPVLEPGGLRLVCQTCPRQG------PAAAARAYLEAPPPGVVLCANRLGSRREVEEAVVHELVHAYDYLVAGVELLDCQALAYSEVRAARAAECSKTSRSLVCSYFRKNCARSTAVRSTEGLFPGKGAGCVDAVFNAAYQDQRPH 185
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLJ2_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.400e-37 Identity = 79/156 (50.64%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 97 EGGRGAGDGQRDSPSGSGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP 564
+GGR G ++ G L ++C C G+ A ARAY+EAPP +VLCANRL R E+EEA+VHELVH YD+ + ++L C+ LAYSEVRAAR AEC + +CS+FKK CV+STA RST +FP +G CV AVF+ AY+D GP
Sbjct: 61 DGGRERGLAEQGGGGGGLTLNIKCINCAEEGL------AMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSEVRAAREAECHYTPQ--LCSWFKKQCVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGP 208
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIN8_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.130e-34 Identity = 85/196 (43.37%), Postives = 114/196 (58.16%), Query Frame = 1
Query: 1 EACQKHLTEALRAERPRRLLEAIEQGLSRKDEEGGRGAGDGQRDSPSGSGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAEC----SKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP-HAP 573
++C L L+ +RPRRL++AI G+ E G R + GS +C++CP G P GARA+LE PP +VLC NR+ E+EEA+VHELVHA+DY + L C+SLA+SEVRAAR AEC S++ ++ + C+R++AARST LFPG G CVD+VF A D P H P
Sbjct: 43 DSCNSALQSVLQRDRPRRLMQAIRAGMQANKENG--------RSNDCGS-----DCRLCPDQG------PEGGARAFLETPPATLVLCVNRMRGAEEMEEALVHELVHAFDYCASNRNLFSCKSLAHSEVRAAREAECHYLYSQSPPLLEGTW--RDCIRNSAARSTAQLFPGNGGRCVDSVFTAAMADTVPLHTP 217
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQF6_9STRA) HSP 1 Score: 130 bits (326), Expect = 3.660e-32 Identity = 75/152 (49.34%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 118 DGQRDSPSGSGK-LRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECS--KASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP 564
+G+ +P G G+ LR+ C+ C G++ ARA+ EA P G+VLC NRL S HEV E + HEL HAYDY VAGL+L C +LAYSEVRAAR AECS K SF+ + +++C R TA +T LFP +G+ CV VF A+ DQ P
Sbjct: 75 EGRAAAPEGCGRPLRISCRDCRKDGVE------GCARAFTEAEPMGVVLCTNRLESCHEVREVLRHELTHAYDYCVAGLDLFKCTALAYSEVRAARDAECSSYKDFPSFL-GWIERNCARRTAVSATRNLFPQEGRDCVAQVFVDAHADQSP 219
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7S5_HETAK) HSP 1 Score: 125 bits (315), Expect = 1.190e-30 Identity = 67/143 (46.85%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 154 LRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAEC--SKASRSFVCSYFKK----SCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP 564
+ C++C TG++ GARA+LE PP +VLCANRL EVEEA+VHELVHAYD+ + G +L DC+ LAYSEVRAAR AEC S+ ++FK+ +C+ A +T+ +FP Q CV AVF A +D P
Sbjct: 39 ITASCRICKETGVE------GGARAFLETPPTALVLCANRLRGAREVEEALVHELVHAYDFCIKGRDLFDCKQLAYSEVRAAREAECYYRNVLGSYGPTWFKEKMTENCIEKNAVNATKSIFPDQASSCVAAVFHEAIRDLEP 175
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CT86_9STRA) HSP 1 Score: 113 bits (283), Expect = 7.420e-26 Identity = 60/140 (42.86%), Postives = 87/140 (62.14%), Query Frame = 1
Query: 154 LRLECQVCPTTGMQQNKRPAAGARAYLEAPPP-GIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGPHA 570
+ +ECQ C + + R AGARAY++ P P IVLC+NRL S+ E++E + HEL+H YD ++L +C+ LAYSE+RAAR AEC + + +Y + CV+ A +T+ +FP +G+ CV VFD A D P A
Sbjct: 94 IAIECQQCGS-----DTRAEAGARAYVKGPEPLSIVLCSNRLSSQREIDEVLTHELIHIYDIKKKRMDLTNCKELAYSEIRAAREAECGNS----LTAYTQLICVKDKATVATKNMFPDEGRACVCNVFDEAMNDHTPFA 224
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUY8_THAOC) HSP 1 Score: 114 bits (285), Expect = 2.560e-25 Identity = 66/171 (38.60%), Postives = 91/171 (53.22%), Query Frame = 1
Query: 154 LRLECQVCPTTGMQQNKRPAAGARAYLEAPPP-GIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGPHAPR*PMADGSTGVWLRVRVNFDGHDPRHGRAR 663
+ +EC+ C ++ + GARAY+ P P IVLC+NR S+ E+EE +VHEL+H YD ++L DCR LAYSEVR+AR AEC SF F C R A +T +F + + CV VFD A++D P R DG + +L+ V +P R
Sbjct: 167 IAIECKPCGSSSRAEE-----GARAYVMGPKPLSIVLCSNRTSSQQEIEEVLVHELIHIYDVHSRQMDLRDCRQLAYSEVRSAREAECHGCLNSF----FTGICARDKATEATRNMFADEARSCVAQVFDDAFKDMAPFDKR-GDTDGQSSDFLKACVRGSNSNPTSASPR 327
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Argonaute (1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z3J4_NANGC) HSP 1 Score: 117 bits (293), Expect = 4.010e-25 Identity = 68/166 (40.96%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 100 GGRGAGDGQRDSPSGSGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGPHAPR*PMADGS 597
GGR G ++ G L ++C C G+ A ARAY+EAPP +VLCANRL R E+EEA+VHELVH YD+ + ++L C+ LAYSE CV+STA RST +FP +G CV AVF+ AY+D GP +A G+
Sbjct: 500 GGRERGLAEQGGGGGGSTLNIKCINCAEEGL------AMKARAYMEAPPMSVVLCANRLQDRREMEEALVHELVHVYDHALVQMDLTTCKDLAYSE------------------------CVQSTATRSTATIFPTEGAACVAAVFEKAYRDVGPKKLHGDLAIGA 635
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7T1_TRICV) HSP 1 Score: 109 bits (272), Expect = 6.990e-25 Identity = 69/178 (38.76%), Postives = 90/178 (50.56%), Query Frame = 1
Query: 130 DSPSGSGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPP-GIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKASRS--------------------------------FVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP 564
D PS + + C+ C ++G + N ARAY+ P P IVLC+N+L EV E ++HELVHAYD V GL+L DCR LAYSEVRAAR AEC R+ ++ CVRS AA +T +FP +G CV AVF+ A +D+ P
Sbjct: 12 DDPSARFSVSVSCRPCLSSGPESN------ARAYVRGPDPLSIVLCSNQLRGPEEVSEVLIHELVHAYDVRVRGLDLRDCRDLAYSEVRAAREAECRHLDRAADGLPPXXXPGAKGDNHPSDAGRGVGGLGPAAWMSDLALGVCVRSKAATATRNMFPERGGACVGAVFERAVRDRSP 183
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Match: Mitochondrial (inner membrane protease ATP23 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYC3_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.000e-24 Identity = 72/198 (36.36%), Postives = 102/198 (51.52%), Query Frame = 1
Query: 7 CQKHLTEALRAERPRRLLEAIEQGLSRKDEEGGRGAGDGQRDSPSGSGKLRLECQVCPTTGMQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLVAGLELLDCRSLAYSEVRAARAAECSKAS------------RSFVCSYFKKSCVRSTAARSTEGLFPGQGQGCVDAVFDTAYQDQGP 564
C + EAL ERP++L++ I + L +RDS + + L C +C G P ARA+ APPP IV CANRL S EVEE ++HEL+HAYD++V +++ LA SE+RAAR +EC + + V + K CVR+ A RST+ +FP + VD + + Y DQ P
Sbjct: 6 CDDAIQEALTRERPKKLVQLINRFL--------------ERDSTA-TKSLDFVCLMCREEG------PEGKARAFFSAPPPTIVFCANRLHSAGEVEETMMHELIHAYDFVVRKMDITKPNILACSEIRAARESECYQKAFLLAKLLPESNLMETVSEWKNKRCVRTHAIRSTQSMFPDEAVDVVDKMLENCYSDQVP 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs9196.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs9196.1.1 >prot_H-canaliculatus_M_contigs9196.1.1 ID=prot_H-canaliculatus_M_contigs9196.1.1|Name=mRNA_H-canaliculatus_M_contigs9196.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=130bp MQQNKRPAAGARAYLEAPPPGIVLCANRLGSRHEVEEAVVHELVHAYDYLback to top mRNA from alignment at H-canaliculatus_M_contigs9196:778..3639+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs9196.1.1 ID=mRNA_H-canaliculatus_M_contigs9196.1.1|Name=mRNA_H-canaliculatus_M_contigs9196.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2862bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9196:778..3639+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs9196:778..3639+ >mRNA_H-canaliculatus_M_contigs9196.1.1 ID=mRNA_H-canaliculatus_M_contigs9196.1.1|Name=mRNA_H-canaliculatus_M_contigs9196.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=390bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs9196:778..3639+ (Hapterophycus canaliculatus Oshoro7m male)back to top |