mRNA_H-canaliculatus_M_contigs8882.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 178 bits (451), Expect = 2.150e-50 Identity = 96/221 (43.44%), Postives = 140/221 (63.35%), Query Frame = 1
Query: 37 VMTKTAFSTKMRLVFIFGLEGTGHHYIMEASDRIFQERKDEPQIQKMGLKRKNYFLTIAMRESAAGFGHARKSARREMRDLARRSEGISFPANVQFLN-GHSVPSGIGSQKVMEYADPRLMAEAAEAEGVDFRVLYLKRSAKEILMANTVHREFQNNLSNPHDTNKQKK-FMEYVRVLFTDAAVVQSFLAELDPAFVICHDWNLFGDPDQAQKIADAIAPN 693
++ KT S RLVF+ GLEGTGHHY+M A+ +F + + P+ G + Y+ + M ++ F + +A MR LA + +S P ++F + S P G KVM+Y D ++AE AE G+DFRVLYL+RSAKE+++ANTVHR+F + + +T Q++ F++Y+RVLFTD AV+ SFL E+ P FV+CHDW+ GD +QA IA I+PN
Sbjct: 138 ILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNLPRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENMRRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPN 358
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 122 bits (305), Expect = 2.870e-29 Identity = 81/229 (35.37%), Postives = 120/229 (52.40%), Query Frame = 1
Query: 37 VMTKTAFSTKMRLVFIFGLEGTGHHYIMEASDRIFQERKDEPQIQKMGLKRKNYFLTIAMRESAAGFGHARKSARREMRDLAR---------RSEGISFPA-NVQFLNGHSVPSGIGSQKVMEYADPRLMAEAAEAEGVDFRVLYLKRSAKEILMANTVHREFQNNLSNPHDTNKQKKFMEYVRVLFTDAAVVQSFLAELDPAFVICHDWNLFGDPDQAQKIADAIAPN 693
V+ K A S++MR+VF+ GLEGTGHHY+ + + + +KD+ + K+ + K + +++ +S + ARK R EM LA S +SF A Q S P+ G +K ++Y D RL+AE AE GVD R +YL RSA +IL +++ H N F+ R+L + AVV S ELDP+F C + DP QA ++A +APN
Sbjct: 98 VVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVC--KKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHH------------NYGGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPN 312
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E6_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.860e-27 Identity = 61/118 (51.69%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 196 YFLTIAMRESAAGFGHARKSARREMRDLARRSEGISFPANVQFLNGH-SVPSGIGSQKVMEYADPRLMAEAAEAEGVDFRVLYLKRSAKEILMANTVHREFQNNLSNPHDTNKQKKFM 546
+F++ MR S+ F + + R +MRDLA+R++ + P VQ + G S P G G QKV +Y D RL+AEAAEAEGVD RVLY+KRSAKE+L+A+TVHR FQN L + D++ +K+FM
Sbjct: 21 FFISTTMRTSSTAFTASWQQGRDQMRDLAQRAQTLPTPGTVQLITGGISYPCGNGPQKVQQYVDLRLLAEAAEAEGVDLRVLYMKRSAKELLLADTVHRGFQNFLGDI-DSSAEKRFM 137
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 106 bits (264), Expect = 3.520e-23 Identity = 75/234 (32.05%), Postives = 113/234 (48.29%), Query Frame = 1
Query: 37 VMTKTAFSTKMRLVFIFGLEGTGHHYIMEASDRIFQERKDEPQIQKMGLKRKNYFLTIAMRESAAGFGHARKSARREMRDLARRSEGISFPAN---------VQFLNGHS------VPSGIGSQKVMEYADPRLMAEAAEAEGVDFRVLYLKRSAKEILMANTVHREFQNNLSNPHDTNKQKKFMEYVRVLFTDAAVVQSFLAELDPAFVICHDWNLFGDPDQAQKIADAIAPN 693
V+ K S+++R++F+ GLEGTGHHY + D P + K + ++A + + AR+ RRE+ +LA ++PA QF+ S P+ G+ K ++Y D RL+AE AE GVD R +YL RSA+ IL+++T H + FM R L +AAVV+S EL P F C + DP+Q ++A IAP+
Sbjct: 57 VVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAA-VPCANACPIA-KALYPSLATPSTKQDYERARRELRRELENLA------AYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGT------------FMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPD 270
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI1_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 1.480e-14 Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 529 KQKKFMEYVRVLFTDAAVVQSFLAELDPAFVICHDWNLFGDPDQAQKIADAIAPN 693
+++ F+EY+RVLFTD AV+QSFL+E+ P F++CHDW+ GD +QA IA IAPN
Sbjct: 10 EERLFLEYMRVLFTDIAVLQSFLSEIGPEFIVCHDWDRLGDKEQASTIAHFIAPN 64
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A0K6_9DINO) HSP 1 Score: 79.0 bits (193), Expect = 1.690e-13 Identity = 65/222 (29.28%), Postives = 102/222 (45.95%), Query Frame = 1
Query: 37 VMTKTAFSTKMRLVFIFGLEGTGHHYIMEASDRIFQERKDEPQIQ----------KMGL---KRKNYFLTIAMRESAA--------GFGHARKSARREMRDLARRSEGISFPANVQFLNGHSVPSGIGSQKVMEYADPRLMAEAAEAEGVDFRVLYLKRSAKEILMANTVHREFQNNLSNPHDTNKQKKFMEYVRVLFTDAAVVQSFLAELDPAFVICHDWN 639
++ K + RL+F+ GLEG+GHH + R + R+ ++ + GL + K Y A + A GF A R +R L+RR+ A++ S P+ G K+ + D RL+AE AE EGVDFR+L L R A +L + T+HR F N + +E+ +A + + L LDPAFV+C +++
Sbjct: 98 LLPKRVHGARWRLLFVAGLEGSGHHLWIPLLKRCVKARRCAADVELGRRLWTDRTRKGLWSFETKLYAPRAAKKWEYAPPGAKWLSGFRRAEGEVRTALRRLSRRNATSPLLASLGGCGMMSYPNFPGKLKMFQTPDVRLLAELAEDEGVDFRILVLHRPAAAVLRSTTIHRHF-------GSWNTEAVVLEH------NAQTLLAQLQSLDPAFVLCTEYD 306 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8882.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8882.1.1 >prot_H-canaliculatus_M_contigs8882.1.1 ID=prot_H-canaliculatus_M_contigs8882.1.1|Name=mRNA_H-canaliculatus_M_contigs8882.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=231bp MANSSSSHGGGRVMTKTAFSTKMRLVFIFGLEGTGHHYIMEASDRIFQERback to top mRNA from alignment at H-canaliculatus_M_contigs8882:175..1663+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8882.1.1 ID=mRNA_H-canaliculatus_M_contigs8882.1.1|Name=mRNA_H-canaliculatus_M_contigs8882.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1489bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8882:175..1663+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8882:175..1663+ >mRNA_H-canaliculatus_M_contigs8882.1.1 ID=mRNA_H-canaliculatus_M_contigs8882.1.1|Name=mRNA_H-canaliculatus_M_contigs8882.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=693bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8882:175..1663+ (Hapterophycus canaliculatus Oshoro7m male)back to top |