mRNA_H-canaliculatus_M_contigs8880.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M0_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 5.890e-16 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAEHPD 114
VGEL+TSSAPYDPLFWVIHPTA+RFL+WRRKLA E PD
Sbjct: 525 VGELYTSSAPYDPLFWVIHPTAERFLSWRRKLATERPD 562
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: TYR (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ6_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 3.810e-15 Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAEHPD 114
VGEL+TSSAPYDPLFWVIHPTA+RF+ WRRKL+ E PD
Sbjct: 476 VGELYTSSAPYDPLFWVIHPTAERFMGWRRKLSVEQPD 513
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: PKD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J9_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 5.230e-15 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAEHPD 114
VGEL+TSSAPYDPLFWVIHPTA+RF+ WRRKL E PD
Sbjct: 530 VGELYTSSAPYDPLFWVIHPTAERFMGWRRKLGVEQPD 567
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: PKD (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSP4_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.820e-14 Identity = 30/38 (78.95%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAEHPD 114
VGEL++SSAPYDPLFWVIHPTA+RF+ W+RKLA E PD
Sbjct: 548 VGELYSSSAPYDPLFWVIHPTAERFMGWKRKLARERPD 585
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GFI3_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.390e-12 Identity = 25/35 (71.43%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAE 105
VGE++TS+APYDPLFWV+HPTA+R L WRR L+A+
Sbjct: 42 VGEMYTSAAPYDPLFWVLHPTAERLLQWRRVLSAK 76
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: Putative (scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 9.360e-12 Identity = 27/35 (77.14%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAE 105
VGE++TS+APYDPLFWVIHPTADR LAWRR L +
Sbjct: 521 VGEMYTSAAPYDPLFWVIHPTADRLLAWRRMLGRQ 555
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: TYR (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.280e-11 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAE 105
VGE+FTS+APYDP+FWV+HPTADR LAWRR L +
Sbjct: 521 VGEMFTSAAPYDPVFWVVHPTADRLLAWRRMLGRQ 555
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CY94_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.750e-9 Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 1
Query: 4 GELFTSSAPYDPLFWVIHPTADRFLAWRRKLAA 102
GE+FTS+APYDP FW IH TADRFL+W+R L A
Sbjct: 62 GEMFTSAAPYDPTFWPIHTTADRFLSWKRILRA 94
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AXN9_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.700e-8 Identity = 21/31 (67.74%), Postives = 28/31 (90.32%), Query Frame = 1
Query: 4 GELFTSSAPYDPLFWVIHPTADRFLAWRRKL 96
GE++TS+APYDP FW+IHP+A+R L+WRR L
Sbjct: 281 GEMYTSAAPYDPTFWLIHPSAERMLSWRRML 311
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSF3_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 2.280e-8 Identity = 23/35 (65.71%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 1 VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAE 105
VG+++TS+AP+DPLFW+IHPTA+R L +RR L AE
Sbjct: 221 VGDMYTSAAPWDPLFWLIHPTAERLLHFRRTLDAE 255 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8880.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8880.1.1 >prot_H-canaliculatus_M_contigs8880.1.1 ID=prot_H-canaliculatus_M_contigs8880.1.1|Name=mRNA_H-canaliculatus_M_contigs8880.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=40bp VGELFTSSAPYDPLFWVIHPTADRFLAWRRKLAAEHPDT*back to top mRNA from alignment at H-canaliculatus_M_contigs8880:1002..1121+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8880.1.1 ID=mRNA_H-canaliculatus_M_contigs8880.1.1|Name=mRNA_H-canaliculatus_M_contigs8880.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=120bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8880:1002..1121+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8880:1002..1121+ >mRNA_H-canaliculatus_M_contigs8880.1.1 ID=mRNA_H-canaliculatus_M_contigs8880.1.1|Name=mRNA_H-canaliculatus_M_contigs8880.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=120bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8880:1002..1121+ (Hapterophycus canaliculatus Oshoro7m male)back to top |