mRNA_H-canaliculatus_M_contigs8870.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Fimbrin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI9_ECTSI) HSP 1 Score: 155 bits (392), Expect = 2.030e-41 Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQASSS*GQEDRGP 291
+ +VMDRIQPG VVWKRVN+APKNRFKKVENGNYVI+IAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA S G+ P
Sbjct: 495 ILKVMDRIQPGVVVWKRVNIAPKNRFKKVENGNYVIDIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQALSKKGKRIEDP 585
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ18_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.240e-40 Identity = 74/80 (92.50%), Postives = 78/80 (97.50%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA 258
+ +VMDRIQPG VVWKRVN+APKNRFKKVENGNYVI+IAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA
Sbjct: 442 ILKVMDRIQPGVVVWKRVNIAPKNRFKKVENGNYVIDIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA 521
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Actin (binding protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF36_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.770e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQASSS 267
+ +VMD IQPG V WK+VN+APKNR+KKVENGNYVIEIAK M LTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ S+
Sbjct: 425 ILKVMDAIQPGVVNWKKVNVAPKNRYKKVENGNYVIEIAKAMRLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQQLST 507
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Actin (bundling protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV37_9STRA) HSP 1 Score: 137 bits (344), Expect = 4.380e-35 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 1
Query: 28 VMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQASSS*G 273
VMD IQPG V WKRVN PKNR+KK+ENGNYVIE+AK M LTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQ S+ G
Sbjct: 432 VMDTIQPGLVQWKRVNKEPKNRYKKLENGNYVIELAKAMQLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQHLSTTG 513
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CR49_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.080e-25 Identity = 40/76 (52.63%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 31 MDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA 258
MD+++PG V W+RVNL+P+N++K++ENGNYV+E+ + M T+V +GG DI+DG K+ A++WQLMR HTL L+ +
Sbjct: 1 MDKLEPGIVDWRRVNLSPRNKYKRIENGNYVVELGRAMEFTLVGIGGTDIVDGYAKLVHALLWQLMRYHTLKLISS 76
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: FIM3 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VU38_SYMMI) HSP 1 Score: 100 bits (250), Expect = 1.770e-22 Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 1 VSSSWYLYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA 258
+S + + Q+ D +QPG V WK+ N PK+ +KKVEN NY +EI + MG ++VN+GGLDI+ ++K+ LAI+WQLMRRHTL +L A
Sbjct: 254 LSDGFVILQLEDSVQPGVVNWKKANKDPKSVYKKVENCNYAVEIGRSMGFSMVNIGGLDIVHKDKKLILAIIWQLMRRHTLKVLAA 339
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHY3_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.240e-22 Identity = 42/84 (50.00%), Postives = 62/84 (73.81%), Query Frame = 1
Query: 1 VSSSWYLYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLL 252
+S+ + +VM+R+Q G VVWK+ + P+NR ++N NY +AK M L +VN+GG+DI DGN+K+ LAIMWQLMRR T+++L
Sbjct: 16 LSNGLPILKVMERMQEGLVVWKKAHADPQNRIHTIDNCNYACTLAKKMDLVLVNIGGMDIADGNQKLILAIMWQLMRRFTVDML 99
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Fimbrin ((Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GDA8_9CRUS) HSP 1 Score: 94.0 bits (232), Expect = 3.860e-20 Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLL 252
L ++MD I+PG V WK V P N+FKKV N NY + + K M ++V +GG+DI+DGN+K+ LA++WQLMR H + +L
Sbjct: 200 LLKIMDHIEPGIVSWKNVEKKPNNKFKKVANTNYAVLVGKQMNFSLVGIGGIDIVDGNQKLVLALVWQLMRYHAVKIL 277
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1W1_9FUNG) HSP 1 Score: 94.7 bits (234), Expect = 4.210e-20 Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAP-KNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQASSS*GQE 279
L MD + PG+V WK+VN AP ++FKKVEN NYV+ + K M ++V +GG+DI DGN+ +TLA++WQLMR H + L+ S+ G+E
Sbjct: 599 LLHAMDTVHPGSVDWKKVNKAPVSSKFKKVENCNYVVVLGKSMKFSLVGIGGVDITDGNKTLTLALVWQLMREHVIQTLRTLSTGGRE 686
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Match: Actin (bundling protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VCL8_NAEGR) HSP 1 Score: 93.2 bits (230), Expect = 1.260e-19 Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 19 LYQVMDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIIDGNRKMTLAIMWQLMRRHTLNLLQA 258
L +V D+++PG V WKRV+ PKNR++ +EN NY +++AK VNVGG DI DGN+K+ L ++WQLMRR L+ L+A
Sbjct: 325 LLKVFDKVKPGCVEWKRVSNPPKNRYQAIENTNYCVDLAKQFKFNTVNVGGTDIADGNKKIILGLIWQLMRRSLLDTLKA 404 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8870.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8870.1.1 >prot_H-canaliculatus_M_contigs8870.1.1 ID=prot_H-canaliculatus_M_contigs8870.1.1|Name=mRNA_H-canaliculatus_M_contigs8870.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=80bp MDRIQPGAVVWKRVNLAPKNRFKKVENGNYVIEIAKVMGLTVVNVGGLDIback to top mRNA from alignment at H-canaliculatus_M_contigs8870:298..1816+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8870.1.1 ID=mRNA_H-canaliculatus_M_contigs8870.1.1|Name=mRNA_H-canaliculatus_M_contigs8870.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8870:298..1816+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8870:298..1816+ >mRNA_H-canaliculatus_M_contigs8870.1.1 ID=mRNA_H-canaliculatus_M_contigs8870.1.1|Name=mRNA_H-canaliculatus_M_contigs8870.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=240bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8870:298..1816+ (Hapterophycus canaliculatus Oshoro7m male)back to top |