mRNA_H-canaliculatus_M_contigs8824.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP-Gly (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJI4_ECTSI) HSP 1 Score: 127 bits (319), Expect = 5.280e-32 Identity = 62/77 (80.52%), Postives = 67/77 (87.01%), Query Frame = 1
Query: 34 EKVRLQGGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELVEEEEGE 264
++V LQG R AVVRYVGETQFATGVWVGVELSPDA PPG NDG+V GVSYF CPP CGVFAKPDMFEL+EEEEG+
Sbjct: 381 QQVCLQGQKKRAAVVRYVGETQFATGVWVGVELSPDADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEEEGD 457
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP-Gly (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBA3_9PHAE) HSP 1 Score: 122 bits (305), Expect = 4.070e-30 Identity = 61/80 (76.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 16 TMRLTSEKVRLQGGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELVEEE 255
T + KV LQG R AVVRYVGETQFATGVWVGVELSP A PPG NDG+V GVSYF CPP CGVFAKPDMFEL+EEE
Sbjct: 363 TSLVEGSKVCLQGQKKRAAVVRYVGETQFATGVWVGVELSPGADPPGNNDGSVRGVSYFKCPPLCGVFAKPDMFELLEEE 442
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP-Gly (domain-containing protein (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NMS9_PIRSE) HSP 1 Score: 68.6 bits (166), Expect = 1.960e-13 Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 1
Query: 67 NAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELV 246
N V+R++G TQFA+G W+G+EL P G N+G++NGV YF+C P GVF +P M +++
Sbjct: 2 NGVIRFIGTTQFASGNWIGIELEK---PVGKNNGSINGVEYFSCKPLYGVFVRPAMVKIL 58
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP (Gly-rich domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H6_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.960e-13 Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 76 VRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDM 234
V++VG TQFA+G WVGV+L G NDGTVNGV YF CPP G+F +P+M
Sbjct: 3 VKFVGSTQFASGTWVGVQLDSTH---GKNDGTVNGVYYFKCPPNTGIFVRPNM 52
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1WB37_NEODS) HSP 1 Score: 68.9 bits (167), Expect = 5.390e-13 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 52 GGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELVEEEEGEE 267
G +R+ ++G T+FA G+WVGVEL DA PG NDG V GV YF C P GVF +P++ E + G E
Sbjct: 24 GDEIRSGTCLFLGATEFADGIWVGVEL--DAQWPGKNDGAVQGVKYFECSPGQGVFVRPELVETLASASGGE 93
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: (California (timema) hypothetical protein n=2 Tax=Timema TaxID=61471 RepID=A0A7R9P9Q3_TIMCA) HSP 1 Score: 71.2 bits (173), Expect = 5.650e-13 Identity = 34/65 (52.31%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 67 NAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELVEEEEG 261
+ VV +VGET+FA G WVG+EL P G NDGTV GV YFTC P CG+F + D L+++ G
Sbjct: 106 SGVVTFVGETEFAAGTWVGIELD---APTGKNDGTVQGVQYFTCRPKCGIFVRADK--LIQDRRG 165
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP-Gly (domain-containing linker protein 3 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0010BD0393) HSP 1 Score: 73.2 bits (178), Expect = 5.740e-13 Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 43 RLQGGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMF-ELVEEEEGEEDEDATAS 288
R+ G R ++R+VGET+FA+GVW GVEL P G NDG V GV YF CPP GVFA +L+ EEEG +D AS
Sbjct: 408 RVVVGNRRRGILRFVGETKFASGVWAGVELD---TPEGKNDGCVGGVEYFKCPPNHGVFALVGRIRKLMSEEEGSDDSVKDAS 487
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7MM21_RHIPC) HSP 1 Score: 72.8 bits (177), Expect = 5.780e-13 Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 64 RNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKP 228
R VVR++GETQFA G W G+EL A P G N+G+VNGV+YFTCPP GVFA+P
Sbjct: 299 RKGVVRFLGETQFAPGYWCGIEL---AKPEGKNNGSVNGVTYFTCPPNHGVFAQP 350
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: CAP-Gly (domain-containing linker protein 4-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XLM0_9ACAR) HSP 1 Score: 72.8 bits (177), Expect = 7.910e-13 Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 43 RLQGGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFE-LVEEEEGEEDE 273
R+ G R V+R+VGET+FA+G+W GVEL P G NDG+VNG+ YF CPPA GVFA ++ EEE DE
Sbjct: 457 RVVVGNKRKGVLRFVGETKFASGIWAGVELDS---PQGKNDGSVNGMEYFKCPPAHGVFALVGRVRRILPEEEAGSDE 531
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L0W8_ORNMO) HSP 1 Score: 72.4 bits (176), Expect = 8.320e-13 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 1
Query: 64 RNAVVRYVGETQFATGVWVGVELSPDAVPPGLNDGTVNGVSYFTCPPACGVFAKPDMFELV 246
R +V+++GETQFA G W G+EL P G NDG+VNGVSYFTCPP G+FA P +V
Sbjct: 184 RKGIVKFLGETQFAPGQWCGIELFK---PQGKNDGSVNGVSYFTCPPNHGIFAPPTRVTIV 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8824.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8824.2.1 >prot_H-canaliculatus_M_contigs8824.2.1 ID=prot_H-canaliculatus_M_contigs8824.2.1|Name=mRNA_H-canaliculatus_M_contigs8824.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=98bp MSTMRLTSEKVRLQGGTVRNAVVRYVGETQFATGVWVGVELSPDAVPPGLback to top mRNA from alignment at H-canaliculatus_M_contigs8824:86..1182- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8824.2.1 ID=mRNA_H-canaliculatus_M_contigs8824.2.1|Name=mRNA_H-canaliculatus_M_contigs8824.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1097bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8824:86..1182- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8824:86..1182- >mRNA_H-canaliculatus_M_contigs8824.2.1 ID=mRNA_H-canaliculatus_M_contigs8824.2.1|Name=mRNA_H-canaliculatus_M_contigs8824.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=294bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8824:86..1182- (Hapterophycus canaliculatus Oshoro7m male)back to top |