mRNA_H-canaliculatus_M_contigs8794.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB0_ECTSI) HSP 1 Score: 228 bits (580), Expect = 4.280e-71 Identity = 119/168 (70.83%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEALNKAKLVCQ-KEVSFNANAGLDRSGPSRFDRWTNSTAA 531
RASLADQLKV++LW F+KIAEERL PA+PGFYKAVMERDKEEGHF+RQAMTMDI++TY+ADNA+C V+++E CR RILASEVTRYTIF+EAAAEVLEVL+++CE AFQA PAYE LLR+AE+DEAQ+EAL+KA L+ + K V F+ + + SR DRWTNST A
Sbjct: 165 RASLADQLKVDKLWALFEKIAEERLRPALPGFYKAVMERDKEEGHFQRQAMTMDIMDTYIADNAVCRVDLTEACRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKAVGFDFDERQTYN--SRSDRWTNSTVA 330
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI3_9PHAE) HSP 1 Score: 224 bits (572), Expect = 7.210e-69 Identity = 117/168 (69.64%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEALNKAKLVCQKE-VSFNANAGLDRSGPSRFDRWTNSTAA 531
RASLADQLKV++LW F KIAEERL PA+PGFYKAVM+RDKEEGHF+RQAMTMDI++TY+ADNA+C V+++E CR RILASEVTRYTIF+EAAAEVLEVL+++CE AFQA PAYE LLR+AE+DEAQ+EAL+KA L+ +++ V F+ + + SR DRWTNST A
Sbjct: 275 RASLADQLKVDKLWALFGKIAEERLPPALPGFYKAVMDRDKEEGHFQRQAMTMDIIDTYIADNAVCRVDLTEACRDRILASEVTRYTIFSEAAAEVLEVLQERCEMAFQASPAYEELLRKAEQDEAQMEALDKANLLPKRKGVGFDFDERQTYN--SRSDRWTNSTVA 440
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: Similar (to retinally abundant regulator of G-protein signaling hRGS-r n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS3_ECTSI) HSP 1 Score: 89.4 bits (220), Expect = 1.390e-17 Identity = 49/131 (37.40%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEAL 423
+ASLA+QL VE+L F++ + +++ + FY ++R++ G FERQA TM I+ Y+ ++A VNISE CR++ILA++VT Y IF+EA AEVL V+ + F + + +E + ++ L
Sbjct: 120 KASLAEQLSVEQLRDEFRQYIKTKVAQELIDFYLDSLDREEVMGFFERQAATMRIVERYIREDAPDQVNISEECREKILATDVTAYDIFDEARAEVLVVMETNFQREFVTTEGFRRIADASEVEHREIRLL 250
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR7_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 3.690e-17 Identity = 46/131 (35.11%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEAL 423
+ASLA+QL V++L F++ + +++ + FY ++R++ G FERQA TM I++ Y+ + A VN+S CR++ILA++VT + IF+EA AEVL V+ F + +L +++++ +L L
Sbjct: 28 KASLAEQLSVDQLRDEFRRYIKTKVAQELVDFYLDSLDREEVAGFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLL 158
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: Signal (transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU02_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 4.400e-16 Identity = 44/127 (34.65%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQ 411
+ASLA+QL VE+L F++ E +++ + FY ++R++ + +F RQA+TM I+ Y+ + A VNIS CR+ IL+++VT Y IF+ A EVL V+ + F + ++ AE ++ +
Sbjct: 28 KASLAEQLSVEQLRAEFRRYIETKVAQELVDFYLDSLDREEIKEYFTRQAVTMRIVAQYIREGAPDQVNISGECREEILSTDVTAYDIFDRARVEVLTVMETNFQREFVETEGFRRIVDAAELEQRE 154
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 5.610e-16 Identity = 45/131 (34.35%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEAL 423
+ASLA+QL V++L F++ + +++ + FY ++R++ FERQA TM I++ Y+ + A VN+S CR++ILA++VT + IF+EA AEVL V+ F + +L +++++ +L L
Sbjct: 273 KASLAEQLSVDQLRDEFRRYIKTKVAQELIDFYLDSLDREEVADFFERQAATMRIVDQYIKEGARDQVNVSGACREKILATDVTAFDIFDEARAEVLAVMETNFRRDFVTTEGFRRILNASKQEQRELRLL 403
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: Signal (transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU07_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 7.740e-16 Identity = 45/133 (33.83%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEALNK 429
+ASLA+QL VE+L F+K E +++ + FY ++R++ + +F RQA TM I++ Y+ + A VNIS CR+ IL+++VT Y IF+ A AEVL ++ + F + + + ++ ++ L K
Sbjct: 38 KASLAEQLSVEQLRDEFRKYIEMKVAQELMDFYIESLDREEIKEYFPRQAATMRIVDQYIREGAAEQVNISGRCREEILSTDVTAYDIFDHARAEVLALMETNFQQDFVETEGFRRIADASALEQQEIRLLRK 170
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 2.040e-15 Identity = 46/131 (35.11%), Postives = 78/131 (59.54%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEAL 423
+ASLA+QL V++L F+K E ++ + FY ++R++ +G+F RQA TM I+ Y+ + + VNIS CR+ IL+++VT Y IF+ A AEVL V+ + F + ++ +E ++ Q+ L
Sbjct: 243 KASLAEQLSVQQLRVEFRKYVETMVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFIETEGFRRIVDASELEQRQMRLL 373
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: Similar (to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 8.170e-15 Identity = 42/100 (42.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVL 330
+ASLA+QL VE+L F++ E +++ + FY ++R++ +G+F RQA TM I+ Y+ + + VNIS CR+ IL+++VT Y IF+ A AEVL V+
Sbjct: 267 KASLAEQLSVEQLRVEFRRYIETKVAQELVDFYLDSLDREEIKGYFGRQAATMRIVEQYIREGSPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVM 366
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0N5_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 8.310e-15 Identity = 44/131 (33.59%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 31 RASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDKEEGHFERQAMTMDILNTYVADNALCPVNISEPCRQRILASEVTRYTIFNEAAAEVLEVLRDKCEDAFQACPAYEVLLRRAEKDEAQLEAL 423
+ASLA+QL V++L F++ E ++ + FY ++R++ +G+F RQA TM I+ Y+ + VNIS CR+ IL+++VT Y IF+ A AEVL V+ + F + ++ +E ++ ++ L
Sbjct: 192 KASLAEQLSVQQLRVEFRRYVETMVAQELVDFYLDSLDREEIKGYFARQAATMRIVEQYIREGGPDQVNISGECREEILSTDVTAYDIFDRARAEVLAVMETNFQRDFVETEGFRRIVDASELEQREMRLL 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8794.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8794.1.1 >prot_H-canaliculatus_M_contigs8794.1.1 ID=prot_H-canaliculatus_M_contigs8794.1.1|Name=mRNA_H-canaliculatus_M_contigs8794.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=179bp MLLAFLSPRCRASLADQLKVEELWGHFQKIAEERLSPAMPGFYKAVMERDback to top mRNA from alignment at H-canaliculatus_M_contigs8794:1650..4482- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8794.1.1 ID=mRNA_H-canaliculatus_M_contigs8794.1.1|Name=mRNA_H-canaliculatus_M_contigs8794.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2833bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8794:1650..4482- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8794:1650..4482- >mRNA_H-canaliculatus_M_contigs8794.1.1 ID=mRNA_H-canaliculatus_M_contigs8794.1.1|Name=mRNA_H-canaliculatus_M_contigs8794.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=537bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8794:1650..4482- (Hapterophycus canaliculatus Oshoro7m male)back to top |