mRNA_H-canaliculatus_M_contigs8326.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Heat (shock protein 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN52_ECTSI) HSP 1 Score: 537 bits (1384), Expect = 4.930e-186 Identity = 315/341 (92.38%), Postives = 327/341 (95.89%), Query Frame = 1
Query: 1 RAVDPRIIRERVREREAKIAAKENKEREKRXXXXXXXXALXXXXXXXXXXXERLRAIARQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGTGSDAGVTPVGEEDMEWLKENLLLEQLNAAISALGTEEDIKVEGLDVMKQLMERRKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 1023
RAVDPRIIRERVREREAKIAAKENKEREKR XXXX XXXXXXXXXXXERLRAI+RQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGG+GS+AGVTPVGEEDMEWLKENLLL+QLNAAISALGTEEDIKVEGLDVMK LMERRK ELKEEEEAAEAKQR DREALV AQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQ+HAAPAGPQKVVAPAV A++ ++A A+SAPERPSRREPREDVWSQ+QQQQLE ALAR+PMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE
Sbjct: 274 RAVDPRIIRERVREREAKIAAKENKEREKREREQXXXXXXXXXXXXXXXXXERLRAISRQAKAGREAHKKEMRRRKKVMKNLYSLAVAQLTVGGSGSEAGVTPVGEEDMEWLKENLLLDQLNAAISALGTEEDIKVEGLDVMKVLMERRKAELKEEEEAAEAKQRTDREALVAAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQLHAAPAGPQKVVAPAVAAAS-SSANARSAPERPSRREPREDVWSQAQQQQLETALARFPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 613
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YDN6_HETAK) HSP 1 Score: 136 bits (342), Expect = 2.010e-33 Identity = 109/273 (39.93%), Postives = 137/273 (50.18%), Query Frame = 1
Query: 178 QAKAGREAHKKEMRRR-KKVMKNLYSLAVAQLTVGGTGSDAGVTPVGEEDMEWLKENLLLEQLNAAISALGTEEDIKVEGLDVMKQLMERRKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 993
QA R A +KE RR K+V + T + + E+D+E E L+ L+A LG E GL ++ L+ R K E + EEEA + + A R + AW E ELS LAKA+ KFPAGSQNRW IS FIA + SKE+CI KYQ+I AP K V A A PS R EDVW+Q QQ LE L ++P MDKNERW++ISA V GK+KKQCVERFK ++
Sbjct: 1 QAAEERAAREKEERRAAKEVRDQMXXXXXXXXXXXXTQIEEKGYDIDEDDLELFLERADLDLLSAGAEVLGGPE-----GLLAIQALLGRAKEE-RAEEEAEQQEAIARRXXXXXXXXXXXXXXXAALTAWSEEELSCLAKAVQKFPAGSQNRWLTISNFIAHMVHTER--SKEECIQKYQEIQTAPGSKPKAGGTKVAAGAXXXXXXXG----PSARASEEDVWTQDQQAALEEGLKKHPASMDKNERWSAISAGVEGKTKKQCVERFKALR 261
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P2_PHATC) HSP 1 Score: 117 bits (294), Expect = 1.560e-25 Identity = 68/153 (44.44%), Postives = 88/153 (57.52%), Query Frame = 1
Query: 565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQI---HAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
W + ELS+LAKA+ K+P G +RWE I+ F+ + +P SKE+CI KY + H+ P VA A S PE S + EDVW+ Q QQL+ LA P MDKNERW +I+ VPGKSKKQCV+RFK ++ L KK
Sbjct: 433 WTKEELSALAKAVKKYPPGGSSRWEQIALFVNNLCKQDEPRSKEECIEKYNNVAKTHSKPTESTNGVA------------AASEPENSS--QSNEDVWTAEQDQQLQDGLAANPASMDKNERWTAITECVPGKSKKQCVQRFKVIRDALKKKK 571
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Subfamily (c member 2 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH1_9STRA) HSP 1 Score: 115 bits (289), Expect = 9.910e-25 Identity = 80/199 (40.20%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 445 RKMELKEEEEAAEAKQRADREALVKAQLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPRE------DVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAE 1023
++ E K EEE ++A A A A+ G + ++ AW E EL LAKA+V+FPAG+Q RW+ I+ ++ R SKE+CI +YQ + A + + V A + + KS SR E D WSQ QQ+QLEA L YP M+KNERW IS V GKSKK+C ER+K ++ +AKKK E
Sbjct: 474 KRREAKREEETSKA---ASGLAHASAEKDGGEESSPKEAAWTEEELGVLAKAVVRFPAGTQKRWQCIADYLNHMVRGASLRSKEECIKQYQVVQAGVSKSRVVAATGGAGAGGGSEGRKSGKTGTSRGEDNGKAVASGDGWSQEQQKQLEAGLVTYPASMEKNERWKRISEGVQGKSKKECAERYKALRA-AVAKKKEE 668
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PG91_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.430e-22 Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKKAEKKA 1032
W ++EL++L+KAI K+PAG RW+ I+ FI + ++P +KE+CI KY I +APA + APA + W++ + L+ L +YP M+KNERW SI+ VPG+SKK+CVERFK ++ + KKA A
Sbjct: 503 WTKDELAALSKAIKKYPAGGAARWDAIASFINNLCKQEEPRTKEECIEKYNLIASAPAAKDTIAAPAD-----------------------DKAWTEKEDTLLQDMLRKYPASMEKNERWKSIAEGVPGRSKKECVERFKAIREAVKTGKKARSNA 635
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEK9_THAOC) HSP 1 Score: 107 bits (268), Expect = 5.170e-22 Identity = 69/191 (36.13%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 475 AAEAKQRADREALVKAQLK----MGSDRESRK-------RAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
A E A+R++L+K Q + +D ++R+ + W + EL++LAKA+ K+PAG NRWE I+ FI + +DP KE+CIA++ ++ ++P+ PA KSA D W+ +Q L+ L +YP MDKNERW+ I+ V GKSKKQCV RFK ++ + KK
Sbjct: 463 AVETAAGAERQSLLKIQQRNANRQAADEKAREAKAARAAKPWTKEELAALAKAVKKYPAGGANRWESIALFINNLCKQQDPRGKEECIAQFNKVTSSPS-------PAAAPGGKEDDAGKSAEAG--------DEWTDAQDAALQDMLRKYPASMDKNERWSKIAEGVEGKSKKQCVGRFKAIREAVKGKK 638
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SB83_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.120e-21 Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 523 QLKMGSDRESRKRAWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRR-EPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKKK 1017
Q ++ RE + W +ELSSLAKA+ KFP G++NRW + +++ + ++EDCI + +I A+ +K + +K+A ++ ++ P E VWS QQ LEAAL ++P MDKNERW SI+AAV GKSKK+CV RFK ++ ++LAKKK
Sbjct: 426 QKRLEKKREKQFAPWSADELSSLAKAMKKFPGGTRNRWMMVCKYLNTIPGSTVERTQEDCI-QQSKIMASDTEKRKDLG-----------TSKAAFDQFQKKLAPSEAVWSNEQQAALEAALKKFPASMDKNERWKSIAAAVEGKSKKECVARFKELRAKVLAKKK 579
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ84_THAPS) HSP 1 Score: 105 bits (261), Expect = 3.040e-21 Identity = 58/148 (39.19%), Postives = 81/148 (54.73%), Query Frame = 1
Query: 565 WEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGP-----QKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVK 993
W ++EL +LAKA+ K+PAG NRWE I+ F+ + +P SKE+CI KY I A+ A P + A + AP W++ Q L+ L +YP MDKNERW SI+ VPG+SKK+CV+RFK ++
Sbjct: 388 WTKDELGALAKAVKKYPAGGSNRWEAIALFVNNLCKQAEPRSKEECIEKYNSIAASAAPPSGSTDKDTAADGEDSGAP---------------------WTEEQDSLLQEMLRKYPADMDKNERWKSIAKGVPGRSKKECVDRFKAIR 514
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: DnaJ-domain-containing (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FW12_9STRA) HSP 1 Score: 103 bits (258), Expect = 8.600e-21 Identity = 60/147 (40.82%), Postives = 82/147 (55.78%), Query Frame = 1
Query: 577 ELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAG-PQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
E+S+L+K + KFPAG NRW+ IS +I R DP +KE+CI + +++ A P + AV S DVW+ Q QQL+ L +P ++KNERW+SIS V GKSKK+CVERFK ++ L AKK
Sbjct: 430 EMSALSKGVKKFPAGGGNRWDQISHYINNVCRPDDPRTKEECIEIFNKVNKAGKQLPNGNTSHAVDDS---------------------DVWNSEQDQQLQKGLTMFPSSIEKNERWSSISDEVTGKSKKECVERFKAIRDALKAKK 555
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9B7_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.800e-20 Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 1
Query: 562 AWEENELSSLAKAIVKFPAGSQNRWEHISQFIAQATRAKDPFSKEDCIAKYQQIHAAPAGPQKVVAPAVTASAPAAAVAKSAPERPSRREPREDVWSQSQQQQLEAALARYPMGMDKNERWASISAAVPGKSKKQCVERFKFVKTQLLAKK 1014
A+ + EL++LAKA+ KFPAG NRW+ IS +I R + P SKE+CI + + A P K+ AP A A SA E P+ W+ Q +QL+A L+ YP M+KNERW+SI+ V GKSKK+CV RFK ++ L AKK
Sbjct: 604 AFTKEELAALAKAVKKFPAGG-NRWDLISNYINNVCRPEIPRSKEECIEVFNR-KPAKNKPGKM--------APVPASAASAGETPA------PCWTVEQDRQLQAGLSAYPSSMEKNERWSSIAGGVRGKSKKECVARFKEIRNALKAKK 738 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8326.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8326.1.1 >prot_H-canaliculatus_M_contigs8326.1.1 ID=prot_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=354bp RAVDPRIIRERVREREAKIAAKENKEREKREREQAKIQALEDEKKAKKDEback to top mRNA from alignment at H-canaliculatus_M_contigs8326:363..3835+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8326.1.1 ID=mRNA_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3473bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8326:363..3835+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8326:363..3835+ >mRNA_H-canaliculatus_M_contigs8326.1.1 ID=mRNA_H-canaliculatus_M_contigs8326.1.1|Name=mRNA_H-canaliculatus_M_contigs8326.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1062bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8326:363..3835+ (Hapterophycus canaliculatus Oshoro7m male)back to top |