mRNA_H-canaliculatus_M_contigs8325.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs8325.1.1
Unique NamemRNA_H-canaliculatus_M_contigs8325.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Leucine (rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.170e-121
Identity = 196/312 (62.82%), Postives = 233/312 (74.68%), Query Frame = 1
Query:   16 RMVAAFAAVASALXXXXXXXXXXXXXXXXXTVDAPVYDTRSSAPYGCPPAGCVGANTRDGMVSGELRWSCANSLDSS-AACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVD----GADVDLIEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGV-LADSEWLSIVE 933
            R  AAFAA  +A                  T +APV+D R++ PYGCPPAGCVGANTRDG+ S E RWSCA SLDSS + CTITYTLED Q L+AL+IALY+GDTRTRT+DI VD     +WTS+G ++ FE ++LGV G+V+EL G L D EWLSI EVEILVD    G++VD++EAG L TVTATA+ YD RLGD++GCDPEGCTA LTRDGDM E SRWSC+P LGG CSISYDLGA   I  L LAMY+G  RVRT+ + VDG+LVTT+++SGTT+ F  V +SG TGQVVTI G  L+DSEWLSIVE
Sbjct:    5 RSWAAFAAAVAAGACVVDAAIVDAGTLTGVTTEAPVFDDRATLPYGCPPAGCVGANTRDGITSDESRWSCAPSLDSSDSGCTITYTLEDEQHLEALKIALYQGDTRTRTIDISVDGNYAFSWTSSGTTSDFESIDLGVDGKVVELVGDLQDWEWLSILEVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVE 316          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: F5/8 (type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 6.860e-108
Identity = 176/286 (61.54%), Postives = 211/286 (73.78%), Query Frame = 1
Query:  106 TVDAPVYDTRSSAPYGCPPAGCVGANTRDGMVSGELRWSCANSLDSSAA-CTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVDGADVD--------LIEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGV-LADSEWLSIVE 933
            T +A V+DTRS+ PYGCPP GCV ANTRDG +S E RWSC  SLD+S + C+IT+TLE  + L  ++IALYKGDTRTRT+D+ VD   + TWTS+G + GFE V L  QGQV+EL G L D EWLSI EVEI VD   VD        ++EA  + TVTATA+ YDTRLGD++GCDPEGCTA LTRDGDM EGSRWSC+P LGG CSISYDLGA  ++  L L MY+G  R RT+++ VDG LVTT+++SGTT  F  V LSG  GQVVTI G   ADS+WLSI+E
Sbjct:   34 TPEASVFDTRSTLPYGCPPDGCVAANTRDGDMSDESRWSCRPSLDASGSGCSITFTLEKVEYLGDIRIALYKGDTRTRTIDMYVDGRHITTWTSSGTTTGFESVLLMDQGQVVELVGDLNDDEWLSILEVEIDVDDGIVDDDTVVVLDVVEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSCAPKLGGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIE 319          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: F5/8 (type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 5.250e-92
Identity = 164/287 (57.14%), Postives = 203/287 (70.73%), Query Frame = 1
Query:  106 TVDAPVYDTRSSAPYG-CPPAGCVGANTRDG-MVSGELRWSCANSL-DSSAACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVDGADVDL--------IEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGVLADSEWLSIVE 933
            TV AP+YDT  +A  G C P GC+G NTRDG   S E RWSC  +L D+ + C ITY L    +L  L IA+YKGD RTRT++I +D+     WTS+G +  FE +E+   G+ I++ GVL DSEWLSI EVEILVD    D         +EAG+L  VTAT+  +D RLGDS GCDP GCTAELTRDGD+ +GSRWSC+PSLGGTCSISYDLGAV D+  L LA+YKG  RVRT+++ VDG+L TT+++SGTT+ F  V LSG +GQ VT+ GVL DSEW+SI E
Sbjct:   35 TVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNIAMYKGDERTRTLEINIDNLPYTVWTSSGTTTDFETIEVDTMGRWIDIVGVLEDSEWLSIMEVEILVDDGVTDTDDVAGTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSLGGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGVLDDSEWVSITE 321          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: F5/8 (type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 7.510e-89
Identity = 160/286 (55.94%), Postives = 200/286 (69.93%), Query Frame = 1
Query:  106 TVDAPVYDTRSSAPYGCPPAGCVGANTRDG-MVSGELRWSCANSL-DSSAACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVDGADVDL--------IEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGVLADSEWLSIVE 933
            T  A +YD R SA  GC P+GCV   TRDG   S E RWSC  +L D+ + C ITY L    +L  L IA++KGD RTRT++I +D+     WTS+G +AGFE +E+   G+ IE+ GVL DSEWLSI EVEILVD    D         +EAG+L  VTAT+  +D RLGDS GCDP GCTAELTRDGD+ + SRWSC+PSLGGTCSISYDLGAV D+  L LA+Y GA RVRT+++ VDG+L TT+++SGTT+ F  + LSG +GQ +T+ GVL + EWLSI E
Sbjct:   34 TAVADLYDPRLSADNGCDPSGCVAELTRDGDATSLESRWSCQPALGDAGSVCRITYGLGIQYQLTGLNIAMFKGDERTRTLEINIDNLPYTVWTSSGTTAGFETIEVDTTGRWIEIVGVLEDSEWLSIMEVEILVDDGVTDTDDVVDTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDESRWSCAPSLGGTCSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGVLDNLEWLSIKE 319          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 3.780e-81
Identity = 150/289 (51.90%), Postives = 191/289 (66.09%), Query Frame = 1
Query:  106 TVDAPVYDTRSSAPYGCPPAGCVGANTRDG-MVSGELRWSCANSL-DSSAACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVD----GADVDL-------IEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGVLADSEWLSIVE 933
            T  A +YD R SA  GC P+GCV   TRDG   S E RW+C  +L D+ + C ITY L    +L +L IA+YKGD RTRT++I +D+    TWTS+G + GFE +EL   G+ I + GVL DSEWLSI EV+I++D    G+D D        +EA  L +VTA A FYD RL    GCDP GC  + TRDGD+   SRWSC+P+LGG C+ISYDLG   D+  L LAM+KG ER  +M++ VD  LVTT+++SGTT+ F  + LSG  GQV+ I GVL DSEWLSI+E
Sbjct:   17 TAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNIAMYKGDERTRTLEISIDNLPYTTWTSSGTTTGFETIELDTMGRWISIVGVLADSEWLSIMEVKIMIDDGETGSDDDNTTTNASGVEASTLGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTASRWSCAPTLGGECTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQVLEITGVLDDSEWLSIIE 305          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 9.340e-80
Identity = 146/288 (50.69%), Postives = 183/288 (63.54%), Query Frame = 1
Query:  106 TVDAPVYDTRSSAPYGCPPAGCVGANTRDGMVSGELRWSCANSLDSSAACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVEL-GVQGQVIELRGVLTDSEWLSISEVEILVDGAD-----------VDLIEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGVLADSEWLSIVE 933
            TV+A  YD   +   GC P+GCV  NTRDG +S   RWSCA +L     CTI+Y L    EL  L++A+YKG  R  TM++ VDD LV TWTS+G +   E ++L G  GQ +E+ GVL DSEWLSI EVEI+V+  D              +EA  L +VT  A  YD  L    GCDP GC A+ TRDGD+   SRWSC+P LGG CSISYDLG   D+  + LAM+KG ER  TME+ VD  LV T+++SGTT+ F  + +SG +GQV+ I GVL DSEWLSI+E
Sbjct:  207 TVEASFYDPSLTVDGGCDPSGCVADNTRDGDLSTASRWSCAPTL--GGECTISYDLGTVYELDELRLAMYKGTERQVTMEVRVDDTLVTTWTSSGTTDDLEAIDLSGTSGQTVEITGVLDDSEWLSIVEVEIMVEDGDQGSGDDDTTTNTSAVEASTLGSVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAASRWSCAPKLGGECSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQVLEITGVLDDSEWLSIIE 492          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 8.260e-46
Identity = 130/383 (33.94%), Postives = 166/383 (43.34%), Query Frame = 1
Query:  112 DAPVYDTRSSAPYGCPPAGCVGANTRDGMVSGELRWSCANSLDSSAACTITYTLEDAQELQALQIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILV-DGA-DVD------------------------------------------------------------------------------------------------------LIEAGALET-VTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGG---TCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFF-GVVYLSGMTGQVVTIEGVLADSEWLSIVE 933
            +A ++D+R +   GC PAGC G  TR                                           GDTRTRTMD+ VD  L  +WTS+G +  FE V LGV GQ +ELRGVL DSEWLSI+EV+ LV DGA D D                                                                                                        E G  +T VT TA+ +D  L    GCDP GCTA LTRDGD  + SRWSC+ +LGG    CSISYDLG    +  L +A+Y G  RVRT+++ VDG LV T+++SGTT+ F  + +  G++G V+ ++GVL DSEWLSI+E
Sbjct:   43 EASLFDSRLAVAGGCDPAGCSGDKTR-------------------------------------------GDTRTRTMDVYVDQALQTSWTSSGTTNEFETVVLGVTGQTVELRGVLADSEWLSITEVKALVEDGATDTDDSEFQIDFPSWATELPPLPNATWRLFLPRHNMSIMTSAHVRGSPTNTSSLPALPYIVQVKIMVLSGDGLAPPPSPPTTTPAPVFAPVATATPTVATPEQLWSAKEIGTQDTTVTTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIE 382          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L7_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 5.880e-33
Identity = 66/115 (57.39%), Postives = 79/115 (68.70%), Query Frame = 1
Query:  460 TDSEWLSISEVEILVD----GADVDLIEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIY 792
            T     S+S VEILVD    G++VD++EAG L TVTATA+ YD RLGD++GCDP+GCTA LTRDGDM E SRWSC+P LGG CSISYD GA   I  L L       + RT  ++
Sbjct:   16 TSKALTSVSMVEILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPDGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDRGAEYRIDELQLGDCGSRAQGRTENVH 130          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ1_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.550e-24
Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 1
Query:  364 LVLTWTSAGISAGFEFVELGVQGQVIELRGVLTDSEWLSISEVEILVDGADVD---LIEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTR 636
            +++ WTS+G +A FE +ELGVQG VI L GVL DS+WLSI EV ILVD  + D   ++EAG L  V ++AEFYD RL D++GCDP GC+A LTR
Sbjct:    1 MIMEWTSSGETAAFETIELGVQGTVIGLHGVLADSDWLSILEVGILVDDGNDDGVAVVEAGELGPVASSAEFYDLRLADTVGCDPAGCSAALTR 94          
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 7.400e-18
Identity = 58/151 (38.41%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  526 IEAGALETVTATAEFYDTRLGDSIGCDPEGCTAELTRDGDMFEGSRWSCSPSL--------GGTCSISYDLGAVRDIYYLHLAMYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIE------GVLADSEWLSIVEV 936
            +EAG + TVT T   +D R  D  GC P+GCT E TRDGD+ + SRWSCS  L        G  C + ++LG  + +  + +A  KG  R RT+ I V+G L    ++ GTT+      L G  G    +       G+ AD E+LSI+EV
Sbjct:  248 VEAGEVTTVTVTTNAFDARTDDD-GCAPDGCTGENTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTAD-EFLSIIEV 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8325.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
Leucine1.170e-12162.82rich repeat carbohydrate binding protein n=1 Tax=E... [more]
F5/86.860e-10861.54type C domain-containing protein n=2 Tax=Ectocarpu... [more]
F5/85.250e-9257.14type C domain-containing protein n=3 Tax=Ectocarpu... [more]
F5/87.510e-8955.94type C domain-containing protein n=2 Tax=Ectocarpu... [more]
Uncharacterized3.780e-8151.90protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.340e-8050.69protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1... [more]
Uncharacterized8.260e-4633.94protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.880e-3357.39protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.550e-2458.51leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Uncharacterized7.400e-1838.41protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs8325contigH-canaliculatus_M_contigs8325:235..4659 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FL48
PFAMsLRR_8
Model size957
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons6
Evalue1.92e-122
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size957
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs8325.1.1prot_H-canaliculatus_M_contigs8325.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs8325 235..4659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854147.8815553-CDS-H-canaliculatus_M_contigs8325:234..4231696854147.8815553-CDS-H-canaliculatus_M_contigs8325:234..423Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 235..423 +
1696854147.9014392-CDS-H-canaliculatus_M_contigs8325:1163..12811696854147.9014392-CDS-H-canaliculatus_M_contigs8325:1163..1281Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 1164..1281 +
1696854147.915923-CDS-H-canaliculatus_M_contigs8325:2675..28571696854147.915923-CDS-H-canaliculatus_M_contigs8325:2675..2857Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 2676..2857 +
1696854147.93326-CDS-H-canaliculatus_M_contigs8325:3479..36261696854147.93326-CDS-H-canaliculatus_M_contigs8325:3479..3626Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 3480..3626 +
1696854147.944533-CDS-H-canaliculatus_M_contigs8325:3977..40891696854147.944533-CDS-H-canaliculatus_M_contigs8325:3977..4089Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 3978..4089 +
1696854147.9566305-CDS-H-canaliculatus_M_contigs8325:4450..46591696854147.9566305-CDS-H-canaliculatus_M_contigs8325:4450..4659Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs8325 4451..4659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs8325.1.1

>prot_H-canaliculatus_M_contigs8325.1.1 ID=prot_H-canaliculatus_M_contigs8325.1.1|Name=mRNA_H-canaliculatus_M_contigs8325.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=319bp
MSPSRRMVAAFAAVASALVAAADATTVEAGTITTVTVDAPVYDTRSSAPY
GCPPAGCVGANTRDGMVSGELRWSCANSLDSSAACTITYTLEDAQELQAL
QIALYKGDTRTRTMDILVDDELVLTWTSAGISAGFEFVELGVQGQVIELR
GVLTDSEWLSISEVEILVDGADVDLIEAGALETVTATAEFYDTRLGDSIG
CDPEGCTAELTRDGDMFEGSRWSCSPSLGGTCSISYDLGAVRDIYYLHLA
MYKGAERVRTMEIYVDGNLVTTYSTSGTTNFFGVVYLSGMTGQVVTIEGV
LADSEWLSIVEVGSACRG*
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mRNA from alignment at H-canaliculatus_M_contigs8325:235..4659+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs8325.1.1 ID=mRNA_H-canaliculatus_M_contigs8325.1.1|Name=mRNA_H-canaliculatus_M_contigs8325.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=4425bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8325:235..4659+ (Hapterophycus canaliculatus Oshoro7m male)
ATGTCCCCTTCAAGGCGTATGGTGGCCGCGTTCGCCGCTGTCGCGAGTGC CTTGGTGGCAGCAGCGGACGCGACGACGGTCGAGGCTGGAACCATCACGA CGGTAACAGTCGATGCTCCTGTCTACGACACTCGTTCAAGCGCACCCTAC GGTTGCCCACCGGCCGGTTGCGTTGGCGCAAACACCAGGGTGAGTGCAAG CTAGAGGGTTTCATGATTGTTGTACAGAGGTTGTGTTCGGGACGGCGGTA ACTAACATGTGTTTACAGCTAACCCGGGGTTGTGAGAGACACGCGGATGT GAGAGGCGCGCCTACCTACGAGCTACATTCGTGGATCTTCGTGAAGTCTG TACTCCTGTATTCCGACCGACTTTCTCTTCCTGTGTCTCCCAACTTTCAC TCGAAAGAAAAATTCCGATATATTGTAAGCTACGAGTACTACAGTACTGT AGTACGTTCGTAACAGTATTTACCATTAGTGTTACGAATTTCGGAGCGCT CATCGCTTCGACAGGACATTTTCAGCCTCGCTGTTACGGCAGCGTACGTC CATCCTGCGGTGGAGGTGCGTTTCAATTTCAAATATCGGCCAGGCTGGTG CTCGGTATGTCTAGCCTCTCATCGTACAGTCCGAACGCTGCAAGTTGAAG TCAAATACCGTAACGATGAACAGCATTGCGTGTGATGCGGATAATTTGCA GACCCTGATAAATCGACACACAGACACTACAATTTAGCACCCCAACCTTC GTACGATGGCAGGGCGATTCTGCGTGTGTGTCTGCCTTGCTTGGTGATCC ACGTCCGTCGCCTTTCCACCCCCGCGTTGCGCGTTACCACGGGCCGCCCC GTATAAATTCAAGCGTGAGCACCGGACTCAATCCAATGATGAATGTGTTG ACGCCACACGTGCATGACATTCCAATCAGGATGGCATGGTCAGCGGTGAG TTGCGCTGGTCCTGCGCGAACTCTCTGGACTCCTCCGCCGCGTGCACCAT CACCTACACGCTCGAAGATGCGCAGGAGCTTCAGGCCCTGCAGATAGGTG AGGGAAGGTGTGATGCGAAGTGGAGTCCCCGAGGAAGCAAGCAAGTCTTT CCGGAAGACGCTGTTGTTCGGCGGTAGGCCTCCGAGGCTGGCTGGGCGCA AATACATTCGCGATTTTGTCAAAATGATCAGTTTATCAGTTTTCTGTCTG CTGCCTACAAAGTAGCCGTCCGCAGCAGCTAGAGTCGCCTCGACGAAGTA TCGCAGTGAAGGCGACAAGAAAAAAGATTCTCCGTTCAGCTATTTCTTCC TCGAGCAGAGTGCCTTGTCGTATCATGGGTACTTGCTGAATGTTAAAACG TTTTAAGCCTGTGAAGAGCACGCGGTATATTTGCGGAACAACAAGCGGGC GTCCACAGAGAGATGTACAGCCGTCTCAACAGAAAAACGTCGATGTTGAG GGTATAATTTGGCGTAGTCACGACATTCTTTCTAGAATACCTCTCTGGAT GTTTTTTGTCCCCGTTGGCGGAGCGAATGCTCAACTATGAAGGCAATTCG ACGCAGACCTTCCTTATTCCTGTCTTGATTGCATTTTACGCAGGCTTGTC CTTCCGTGATTTAAGCTCTCCCTAAACAAGCATAGCGCACAAGAAACACA CAAAACACGCTGACTAATCTAGACTACCCAGTCAAAAGAAAAAAAGCTTC TGCGCCTCCGTCTCGATCCTCCTCGCGGTGTACGATCTCCGAGCTCACAG ACGTGAAAGGTGGTAAGCGCTCGCTCCTCGGTAGGCATGTTCGAGGCGCG AGGCCGCAAGAAGCACAGGAATAAGTGTAGTTATCTCACGTTTGCACACA CTATACTCTTCAGTTGCCCACGGCAGAGGGGGCAGAAGTATAAAGTGTTT CGAAAATCAAGCCGCTAGCTCCCGCAGAGAAGTGGCACCGTCTTTTACCC CTCTCAGCGCCCCGAGGAAACAGCGGCCGGTGCCGGTCGCAGCGGGAATG AAGACCGGTGGCGTGATTCTCAAGAGCGAGGGACATAAAATTGGTTGCGT GGGTAGAATGAAGTTGAAGTGCTCTCTGCAAGTGCCCTAGGTATTGCAGT GGCACCATCGCAAAGGCGTTCTTTGACCACCTGATTGAGCGGAATCTTAC ACGAAGACAGGGAAGCAGGAGGCTTGGCGAAATTCAACACCTCGTTGTTG GGAGTGATTTCACACCACACAGAGGTCTTGTAAGTTTTTTAAATACAGAT CCGGAGCCATGAGAGGCTTTATCGCATATCGACTTTGATCAGATGTTTGA GCGATGGTAGTTGCCTTGCCGTCCCTTTCTCGAAAGTCAGCCCCGCTCAA GCCCAATATACAGGAAGAAATGGAGCCAGCGGATCCAGCGCCATCGCCAT GCACTGTGATCATTCCCTTTCTGTCCGACCTTCCCACGCAGCACTGTACA AGGGCGACACGAGAACGAGGACCATGGACATATTGGTGGACGACGAACTC GTACTCACTTGGACCAGCGCGGGCATAAGCGCCGGGTTCGAGTTTGTCGA GCTGGGTGTCCAAGGGCAAGTGATCGAACTTCGCGGCGTTTTGACGGACT CGGAGTGGCTCAGTATTTCGGAGGTTAGTGAACACGCATGGGGGTCGCCG AAACGGCGTGACGGGCACAGCAACATCCTCGAATGCGCACTCACTTGAAG ACGTCCATCGAACACTCAAAGCCCATTTTTCGGAAATTGCGTCACATCCG CCTTCCCCCCCCAAGGACAGGCAGGGGCCCAAGTCAGACTTCAATGAGAC GTCTCTTGACAAGTTTTGGATCGATGAACGAATTTACTTCTGTTGAATCG CTCGCCGAAACGGAGGATGTGTGACCCTGTGAACGCTTCAAACATCCGTG TTTCTGCTGTTCTCTCGACAGTTTGACTCTCATTTCCTTGCATCGACGAA AGTTGCACTCGCCCGACACTAACAACGTTGTGTAATACTACACGCTTGAG TGCATGGTGACTTCGCCCACGAATACGCCTCGAAGGGCTGAGAGCGCACC GAGCCTGACATCATCGATCGCCGAAGCCCTTCCTCCCGCACGACCGTCAA AATTGATATGTTTGAGGCTTGGCCCTTACAACCTTACAGCTAGTGGTCCC CTTGTCCACCGCTACTCTAAGATTTCATGAAAGCCACTCAAGGCTTAACC ATACGGGTGCATACCTCCCACGACGCGCGCTGTGTTCATGTGCAGGTGGA GATCCTTGTCGATGGCGCCGACGTTGACTTGATTGAGGCCGGTGCGCTAG AAACGGTGACGGCCACGGCCGAATTCTACGATACTCGTCTCGGAGACTCC ATCGGCTGCGACCCAGAGGGGTGCACTGCCGAGCTCACGCGGGTATGTTA ACTTCGAGCCCACGTGGCATGTTCGTTCGGCCGCACGCGCTTAGCGTTGA GGCATCACTTGACACGAAATCACATGTCTTCTTTGTACGCTTCAAAAGCT GGTATCGTAGAGGGCGCCGAATTTCGTGTCCTCCCACCTCTCCCCGCCAC CGTTGGGCAATGTGGCGAATGTCGACTCCTTTACCGCCAGGAAAAAACTC CAAAGCTCTGAAGCTCGCGCTTCATGTTATCTCCAATTTTCGTTTTGCGT GGGGAGCCAACCAGCAGCAGCAGCAGTGTCGTCGTGCTTCGATTCTTCGA AACATCCCTTGACTGGATTTAAGCTTTGAACCCACTCTTTCAGGATGGCG ACATGTTCGAGGGGTCGAGATGGTCTTGCTCTCCCTCCCTCGGTGGCACC TGCAGCATCTCTTACGACCTCGGGGCTGTCCGTGACATCTACTACCTCCA CCTTGGTAAGCTCGCTGTTTCCACCACCCCCCTCGGCAGGAACGCAAACG CATGCAGCCTGCTACCGTCTAACGTCCCGTTGGCATGCTTGATGCTTCTT GGTTTTGGTTTCATCCGGTGGCCGAACCGATGCCGCACGCCTGGGGTCTG TCCATAATATTGGAACCAGCCTTCTGTAGTATCTGCCCACAAGTCGAAAG TCTCGATTTATTTCCGTCCCCAGGTGTGGCGATCCCGCGCTCATCCAGGC ATCAGGAGCCACCGTACAAATTGCATTCCAAAGAGCAGCAACTAGCGCTT TCAACGCCGCCTGTGCGACGGCAACGGGTCTGATACCGCCGGCTGTCATC CCTCCCTACTCCCCAGCGATGTACAAGGGCGCCGAGAGAGTGCGAACCAT GGAAATATACGTTGATGGAAACCTGGTTACCACCTATTCCACCTCGGGGA CAACGAACTTCTTCGGCGTTGTCTATCTCTCCGGGATGACTGGCCAAGTC GTCACCATCGAAGGCGTTCTGGCTGACTCCGAGTGGCTCAGCATCGTCGA GGTGGGTTCGGCGTGTCGCGGATGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8325:235..4659+

>mRNA_H-canaliculatus_M_contigs8325.1.1 ID=mRNA_H-canaliculatus_M_contigs8325.1.1|Name=mRNA_H-canaliculatus_M_contigs8325.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=957bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8325:235..4659+ (Hapterophycus canaliculatus Oshoro7m male)
ATGTCCCCTTCAAGGCGTATGGTGGCCGCGTTCGCCGCTGTCGCGAGTGC
CTTGGTGGCAGCAGCGGACGCGACGACGGTCGAGGCTGGAACCATCACGA
CGGTAACAGTCGATGCTCCTGTCTACGACACTCGTTCAAGCGCACCCTAC
GGTTGCCCACCGGCCGGTTGCGTTGGCGCAAACACCAGGGATGGCATGGT
CAGCGGTGAGTTGCGCTGGTCCTGCGCGAACTCTCTGGACTCCTCCGCCG
CGTGCACCATCACCTACACGCTCGAAGATGCGCAGGAGCTTCAGGCCCTG
CAGATAGCACTGTACAAGGGCGACACGAGAACGAGGACCATGGACATATT
GGTGGACGACGAACTCGTACTCACTTGGACCAGCGCGGGCATAAGCGCCG
GGTTCGAGTTTGTCGAGCTGGGTGTCCAAGGGCAAGTGATCGAACTTCGC
GGCGTTTTGACGGACTCGGAGTGGCTCAGTATTTCGGAGGTGGAGATCCT
TGTCGATGGCGCCGACGTTGACTTGATTGAGGCCGGTGCGCTAGAAACGG
TGACGGCCACGGCCGAATTCTACGATACTCGTCTCGGAGACTCCATCGGC
TGCGACCCAGAGGGGTGCACTGCCGAGCTCACGCGGGATGGCGACATGTT
CGAGGGGTCGAGATGGTCTTGCTCTCCCTCCCTCGGTGGCACCTGCAGCA
TCTCTTACGACCTCGGGGCTGTCCGTGACATCTACTACCTCCACCTTGCG
ATGTACAAGGGCGCCGAGAGAGTGCGAACCATGGAAATATACGTTGATGG
AAACCTGGTTACCACCTATTCCACCTCGGGGACAACGAACTTCTTCGGCG
TTGTCTATCTCTCCGGGATGACTGGCCAAGTCGTCACCATCGAAGGCGTT
CTGGCTGACTCCGAGTGGCTCAGCATCGTCGAGGTGGGTTCGGCGTGTCG
CGGATGA
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