mRNA_H-canaliculatus_M_contigs8322.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Aa_trans (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI) HSP 1 Score: 162 bits (410), Expect = 7.520e-46 Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1
Query: 1 MQDPTETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGKPLK----AEVMANYVIAGLGVSLAVLGGGLSIKKSFF 297
+ +PTE QRKVGTTLLL FTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWI++ KKD KWGKPLK AE+M NYVI+ LGV+LAVLGGGLSIKKSFF
Sbjct: 376 ISNPTENQRKVGTTLLLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIAQSKKDAKWGKPLKGWRRAEIMGNYVISALGVALAVLGGGLSIKKSFF 478
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IT91_9EUKA) HSP 1 Score: 74.3 bits (181), Expect = 2.090e-13 Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 4 QDPTETQRKVGTTL-LLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGKPL----KAEVMANYVIAGLGVSLAVLGGGLSIKKS 291
Q +T VG++L LL + + L DLG VV+FGGA+LGS+LV+IFP +M+I+ ++ + GKP+ + E+ ANY + LG +LA +GG +S+K +
Sbjct: 374 QHAAKTSVHVGSSLILLCAMNGLALKLKDLGLVVAFGGALLGSSLVYIFPALMFIAATRQQMAKGKPISRARRYEMFANYGLVALGAALAGVGGYMSLKNA 474
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Aa_trans (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 2.900e-13 Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 10 PTETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGK-----PLKAEVMANYVIAGLGVSLAVLGGGLSIKKSFF 297
P+ + V T +LLA+ + + V L D+GFVVS GGA+LGS +++IFP +++I + V G+ +K EV+ N I LGV LA++G +S+ K+FF
Sbjct: 412 PSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVAKGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAFF 512
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Transmembrane (amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.990e-13 Identity = 33/65 (50.77%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 10 PTETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGKPL 204
PT+TQ +V T +L+ T ++L +LGFVV+FGGA+LGSA++++FP +MW+ KCK D+K G L
Sbjct: 342 PTKTQIRVATVAILSALTGCAMVLRNLGFVVAFGGALLGSAIIYVFPAVMWVGKCKGDMKRGDKL 406
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LDT1_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.860e-12 Identity = 40/103 (38.83%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 4 QDPTETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKK-----DVKWGKPLKAEVMANYVIAGLGVSLAVLGGGLSIKKSFF 297
++ +E+ R T LLL+ T I ++L + GFVVS GA+ GS++++IFP++M++ +K ++K K L+AE M N + GLG L LG +S+ +SFF
Sbjct: 371 ENVSESLRLNATKLLLSGVTCIALVLENSGFVVSLNGAITGSSIIYIFPSLMFLRSTQKRLLSGELKLSKSLRAERMLNKFMIGLGAVLGCLGASVSVLESFF 473
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VTN1_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.050e-12 Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 28 KVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWG-----KPLKAEVMANYVIAGLGVSLAVLGGGLSIKKSFF 297
K T LLL + ++L + GF VSF GAV+GSA++++FP M++ + ++ G K ++AE MA+ VI GLG + V+GG +++ +FF
Sbjct: 173 KTLTKLLLGSLAGLALVLKNAGFTVSFVGAVMGSAIIYVFPPYMYLKSTSRRIRSGALRLSKRVRAERMASRVIIGLGALMGVVGGSVTVMDAFF 267
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMK0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 6.510e-12 Identity = 41/100 (41.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 13 TETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWG-----KPLKAEVMANYVIAGLGVSLAVLGGGLSIKKSFF 297
T+ R T +LA T +LL D GFVVSF GA++GSA+++IFP++M++ K V G +K E + N +I LGV LA++GG +S+ FF
Sbjct: 390 TDKTRTSVTRAILAGVTIGALLLEDAGFVVSFNGALMGSAIIYIFPSLMYLQSMKNRVANGLMADSTGVKLEAIFNKLILSLGVILAIMGGTVSVLSEFF 489
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E4C9_9EUKA) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-11 Identity = 36/93 (38.71%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 31 VGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWG--------KPLKAEVMANYVIAGLGVSLAVLGGGLSIK 285
V T LLLA+ + +++ DLG + +F GA+ GSA+++IFP M++ G + K+E++AN+++AGLGV LAV+GG +S K
Sbjct: 53 VSTVLLLAVMNGLALVVKDLGALAAFSGAIAGSAIIYIFPAAMFLKSAAVQRAKGTGAAPGAPRYKKSEILANWLMAGLGVLLAVVGGVVSAK 145
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EVY8_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 1.410e-11 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 28 KVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGKPL--KAEVMANYVIAGLGVSLAVLGGGLSIKKS 291
+ T LLLA + I + L DLG VV+FGGA+LGS LV+IFP +M++ K K D + L +AE N +A GV LA +GG +++KK+
Sbjct: 206 RASTVLLLAAVSTISLFLKDLGLVVAFGGAILGSGLVYIFPALMFL-KHKHDANEPQTLATRAETGLNIGVALSGVMLAAVGGTMTLKKA 294
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWJ3_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 2.260e-11 Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 28 KVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWISKCKKDVKWGKPL--KAEVMANYVIAGLGVSLAVLGGGLSIKKS 291
+ T LLLA + I + L DLG VV+FGGA+LGS LV+IFP +M++ K K D + L +AE N +A GV LA +GG +++KK+
Sbjct: 396 RASTVLLLAAVSTISLFLKDLGLVVAFGGAILGSGLVYIFPALMFL-KHKHDANEPQTLATRAETGLNIGVALSGVMLAAVGGTMTLKKA 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8322.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8322.2.1 >prot_H-canaliculatus_M_contigs8322.2.1 ID=prot_H-canaliculatus_M_contigs8322.2.1|Name=mRNA_H-canaliculatus_M_contigs8322.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=100bp MQDPTETQRKVGTTLLLAMFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPback to top mRNA from alignment at H-canaliculatus_M_contigs8322:444..1298+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8322.2.1 ID=mRNA_H-canaliculatus_M_contigs8322.2.1|Name=mRNA_H-canaliculatus_M_contigs8322.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=855bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8322:444..1298+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8322:444..1298+ >mRNA_H-canaliculatus_M_contigs8322.2.1 ID=mRNA_H-canaliculatus_M_contigs8322.2.1|Name=mRNA_H-canaliculatus_M_contigs8322.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=300bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8322:444..1298+ (Hapterophycus canaliculatus Oshoro7m male)back to top |