mRNA_H-canaliculatus_M_contigs8321.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E7_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.010e-60 Identity = 325/666 (48.80%), Postives = 355/666 (53.30%), Query Frame = 1
Query: 37 MEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGEGKTFRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVG---GEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATA-SAALGEVEGDEDEDDVSLSSEASDASAEEEGADD---FFMNSAMRDLDLEGDLGGSNNSQNGATVKEEDGSDSSSANDARSSANSKNRGLPNPTPEKKSRGLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHIDAGNF----NLLDAVSTASLAANTVDPDGNMRTAAAVATXXXXXXXADAATDRFHLGGGLGGAVSAATVAGLSWWSKHNADASDAEESLE--RTGGIVDRKARENEGDGLEEGSNHKEQPS---------------------------ETRXXXXXXXXXXXXXXXXXXXXXXXTSETGQK-----HDQSRREPAEPSGSEAEGDESESSERVEDLRPAGRRRRRKAEKIGADSAAPTAAKGAXXXXXX----------------ALKAAKAGQGTGEGHGAAVVG--RRGEDEDELSCRVCRRHFPSRSKLFAHVKAEDHALL 1845
MEKENSKKRA ARR+YQDDVRALV+FCRRRDRRVIR+KLKLAK+KE XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX AG K FRLDD XXXXXXXXXXXXXXXXXX RAG+ G G EQE VFVCAVCKKDFKSKGQM NHETSKAHKKKLKELDAEMLREA A +A E+EG++ FF++SAMRDL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NL + ++TAS AAN +DPDG+MRTAAAVA XXX +AATDRFHL G LG AVSAAT AGLSWW KHNA+ASD EE E R G D +A + ++H S + R +TG H S E S D S+ S RVE+L PAGRRRRRKA A + G X ALKAAK G G GHG A G RRG +E LSCRVC +FPSRSKLFAHVKAE HA+L
Sbjct: 1 MEKENSKKRAIARRKYQDDVRALVDFCRRRDRRVIRYKLKLAKDKEERXXXXXXXXXXXXXXXXXXXXXWARAKQXXXXXXXXXXXXAGGDKAFRLDDXXXXXXXXXXXXXXXXXXXXRHHKRNAKRYEGGSIEFDWRAGRGGKGRGGNEQEGTVFVCAVCKKDFKSKGQMLNHETSKAHKKKLKELDAEMLREAMAKTAGRKEMEGEDXXXXXXXXXXXXXXXXXXXXXXXXXXFFLDSAMRDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPNLFETIATASEAANQIDPDGDMRTAAAVAASAAAXXXXNAATDRFHLSGDLGSAVSAATSAGLSWWKKHNAEASDGEEDAELMRAGASDDSEAWTKGKHRTKSKAHHDHNHSPAXXXXXXXXXXXXXXXXSKAGTHEGDQGRRRYARQEDHDDSEHRGKKGHTAKGKQTGHARGRGAHHGSPDETRSSSSRARSDDGSDHSRRVEELEPAGRRRRRKAGVHHAKAGNLLGKNGTGGDADXXXXXXXXXXXXXXKRQALKAAKDGHGKNVGHGTAADGGPRRGGEEGGLSCRVCGSNFPSRSKLFAHVKAEGHAVL 666
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: DnaJ (homologue n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS0_ECTSI) HSP 1 Score: 87.0 bits (214), Expect = 5.510e-15 Identity = 48/56 (85.71%), Postives = 54/56 (96.43%), Query Frame = 1
Query: 1 VWQAESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKE 168
V +AE+RRVRRLMEKENSKKRA ARR+YQDDVRALV+FCRRRDRRVIR+KLKLAK+
Sbjct: 196 VNEAENRRVRRLMEKENSKKRAIARRKYQDDVRALVDFCRRRDRRVIRYKLKLAKD 251
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT5_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.280e-10 Identity = 108/253 (42.69%), Postives = 134/253 (52.96%), Query Frame = 1
Query: 10 AESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGEGKT---FRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVGGEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATASAALGEVEGDEDEDDVSLSSEASDASAEE---EGADDFFMNSAMRDL 750
A RRVRRL+EKEN K R +ARR+Y +V+ LV + RRRDRRV++ + + A XXXXXXXXXXXXXXXX XXXX E RL D D XXXXXXXXXXX G G +V+ CA+CKKDFKS+ QM NHE SKAHKK+L++LD E+LREA A A + +G+E S++ SD E+ +GA D RD+
Sbjct: 181 APDRRVRRLIEKENLKTRTTARREYSAEVKNLVTYVRRRDRRVVQEQQRQAXXXXXXXXXXXXXXXXXXXXTRLRKEEWAAXXXXEEALLEEQYENGSENGAAPPVRLADMDSDEGXXXXXXXXXXXA--------------------------GAG-----VVYRCALCKKDFKSEKQMGNHEASKAHKKRLEQLDVELLREALAEAQDSDSDGNEP------STQRSDGGGEDATGDGAPDITAGGLERDV 396
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: DnaJ-like (subfamily C member 21 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GC75_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.030e-6 Identity = 69/236 (29.24%), Postives = 99/236 (41.95%), Query Frame = 1
Query: 7 QAESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGEGKTFRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVGGEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATASAALGEVEGDEDEDDVSLSSEASDASAEEEGA 714
+A +R RRL++KEN K R RR Y + VR LV + ++RD+RV++ +L KE+E +GE + FRL DED RA + + E++V+ C C KDFKS+ Q+ NHE SK HK+ LK+L M RE AL E E+ D + S+A +++ EE GA
Sbjct: 184 EAVNRYQRRLIDKENRKARDMERRAYNEQVRNLVGYIKKRDKRVLKLELNRQKERERREKERLAALDEKKRLRREAREQWREHYEEDIAQQLAEAEASGE-RLFRLADEDAKATNEA------------------------------RAHAEA---QDEIVVWHCDACSKDFKSEKQLRNHENSKKHKEALKKLQLRMQREEEMLQALLAQEEAENAD--AAESDAGESTDEEPGA 383
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D993_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.660e-6 Identity = 72/222 (32.43%), Postives = 105/222 (47.30%), Query Frame = 1
Query: 10 AESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGE---GKTFRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVGGEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATASAALGEVEGDEDEDDV 666
A SR+VRR MEKEN K R + R++YQ+ VRALVEF +RRD+RV++ +++ +E+ GE + RL DE+ XXXXXXXXX R GK GG ++V+ + C VC K FKS+ Q+ NH+ S+AH+K ++ L AE G++EG E+E+++
Sbjct: 223 APSRQVRRAMEKENRKSREAGRKEYQEAVRALVEFVKRRDKRVMQRQVQGKREEAARIQAEAEEAKVKAEKFRREREIWLQEQTRLWEEEEVRRVEEGEEGRSASVRLADEESSGESXXXXXXXXXGRESRRWKP--------------RKGKK-KGGRKDVV-YECVVCAKTFKSEKQLNNHKQSRAHRKMVETLQAE----------FGDLEGLEEEEEM 418
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6X6_HETAK) HSP 1 Score: 56.6 bits (135), Expect = 1.190e-5 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 1
Query: 10 AESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKE 174
A RRVRR MEKEN R+ R++YQD VRALV+FC+RRD+RV+ + ++ + KE
Sbjct: 120 APDRRVRRAMEKENKSARSQKRKEYQDQVRALVDFCKRRDKRVVLRQKEMRQAKE 174
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: J (domain-containing protein n=10 Tax=Zea mays TaxID=4577 RepID=A0A804RFJ1_MAIZE) HSP 1 Score: 58.5 bits (140), Expect = 2.390e-5 Identity = 99/257 (38.52%), Postives = 119/257 (46.30%), Query Frame = 1
Query: 1 VWQA---ESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGEGKTFRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVGGEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATASAALGEVEGDEDEDDVSL----SSEASDASA----EEEGADDFFMNSA 738
W A ESRRVRRLME++N K ARR+Y D VR LV FC++RD+RV+ LK E+E XXXXXXXXXXXXXXXXXX ARA EG L DED RA K+ + CA C K FKS Q NHE SK H+ K+ EL + RE + E EGD +E D+ + E+ DASA EE A++F N A
Sbjct: 185 AWDAARGESRRVRRLMEEDNKKAMRKARREYNDAVRGLVAFCKKRDKRVVDMVLKKKLEEEKXXXXXXXXXXXXXXXXXXRAMAYQEHEW----------ARAEEG----LYDEDEEEEM--------------------------------RAKKE---------LSYCATCNKKFKSDKQWKNHEQSKKHRNKIAEL-RKAFREEESLKKAEEGEGDWNEVDMGFDFKPTQESDDASAFSDAAEELAEEFESNYA 385
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Match: J (domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804RDE8_MAIZE) HSP 1 Score: 58.5 bits (140), Expect = 2.860e-5 Identity = 99/257 (38.52%), Postives = 119/257 (46.30%), Query Frame = 1
Query: 1 VWQA---ESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKLKLAKEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARAGEGKTFRLDDEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRAGKDGVGGEQEVIVFVCAVCKKDFKSKGQMTNHETSKAHKKKLKELDAEMLREATASAALGEVEGDEDEDDVSL----SSEASDASA----EEEGADDFFMNSA 738
W A ESRRVRRLME++N K ARR+Y D VR LV FC++RD+RV+ LK E+E XXXXXXXXXXXXXXXXXX ARA EG L DED RA K+ + CA C K FKS Q NHE SK H+ K+ EL + RE + E EGD +E D+ + E+ DASA EE A++F N A
Sbjct: 185 AWDAARGESRRVRRLMEEDNKKAMRKARREYNDAVRGLVAFCKKRDKRVVDMVLKKKLEEEKXXXXXXXXXXXXXXXXXXRAMAYQEHEW----------ARAEEG----LYDEDEEEEM--------------------------------RAKKE---------LSYCATCNKKFKSDKQWKNHEQSKKHRNKIAEL-RKAFREEESLKKAEEGEGDWNEVDMGFDFKPTQESDDASAFSDAAEELAEEFESNYA 385 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8321.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8321.1.1 >prot_H-canaliculatus_M_contigs8321.1.1 ID=prot_H-canaliculatus_M_contigs8321.1.1|Name=mRNA_H-canaliculatus_M_contigs8321.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=617bp VWQAESRRVRRLMEKENSKKRASARRQYQDDVRALVEFCRRRDRRVIRHKback to top mRNA from alignment at H-canaliculatus_M_contigs8321:239..3862+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8321.1.1 ID=mRNA_H-canaliculatus_M_contigs8321.1.1|Name=mRNA_H-canaliculatus_M_contigs8321.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3624bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8321:239..3862+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8321:239..3862+ >mRNA_H-canaliculatus_M_contigs8321.1.1 ID=mRNA_H-canaliculatus_M_contigs8321.1.1|Name=mRNA_H-canaliculatus_M_contigs8321.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1851bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8321:239..3862+ (Hapterophycus canaliculatus Oshoro7m male)back to top |