mRNA_H-canaliculatus_M_contigs8317.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.380e-28 Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 RKIKYEAQLTSEVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
RK +Y+AQ+ SEVLRY+G+ + D NPL WWD H+ + PLLRE++ R+LCVPASSAASERLFSKAGLT TK R+ L G +VAQLVTL
Sbjct: 475 RKEEYDAQMKSEVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLVTL 562
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 4.500e-20 Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 1 RKIKYEAQLTSEVLRYKGLGRLPMDRNPLAWWDSHQQ--SLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
RK +Y AQ+ EVLRY+ L ++ + +PL WW+ QQ S P LRE+ MRVLCVPA SA+S+R+FSK GL + R RLRG +VA +T+
Sbjct: 813 RKDQYLAQIRWEVLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVAPRLTI 902
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ9_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 4.620e-19 Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 1 RKIKYEAQLTSEVLRYKGLGRLPMDRNPLAWWDSHQQ--SLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
RK +Y AQ+ EVLRY+ L ++ + +PL WW+ QQ S P LR++AMRVLCVPA SA+S+RLF K G+ R RLRG +VAQ +T+
Sbjct: 379 RKDQYLAQIRWEVLRYRALDKIDSESDPLLWWEQGQQRWSFPSLRQLAMRVLCVPACSASSKRLFFKTGVVGNSKRARLRGSRVAQRLTV 468
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=2 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5KAL8_PANHP) HSP 1 Score: 75.1 bits (183), Expect = 3.100e-14 Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 34 EVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
EVL+Y+ + LP+ +PL WW SH+ LP+L +A LC+PA+S ASER+FS AG + R+ LR V QL+ L
Sbjct: 204 EVLKYRSMAPLPLTESPLDWWKSHETELPILANLARSYLCIPATSVASERVFSTAGDIVSSQRSSLRPDCVNQLIFL 280
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: BED-type (domain-containing protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YW07_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 3.940e-14 Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 1
Query: 16 EAQLTSEVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
E SE+ +Y L +P++ +PL WW H+Q P++ +A + LC+PA+S ASER+FS AG +KLR+RL V +L+ L
Sbjct: 493 EENSESELEQYLSLPAIPLEADPLEWWKKHEQQYPIMSRLARKFLCIPATSVASERVFSAAGQAVSKLRSRLLPDNVDKLIFL 575
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Zinc (finger BED domain-containing 1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M8L4_LABRO) HSP 1 Score: 73.2 bits (178), Expect = 1.680e-13 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 34 EVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
E+ Y L + +D+NPL WW ++Q P L ++A ++LC+PA+S ASERLFS +G +T R+ L+ K+ LV L
Sbjct: 208 EISAYTTLPTISVDKNPLQWWKENEQEFPRLAKVAQKILCIPATSVASERLFSSSGNIQTVFRSSLKPDKLNMLVFL 284
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=A0A3P8NTG9_ASTCA) HSP 1 Score: 72.4 bits (176), Expect = 5.570e-13 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 34 EVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
E+ RY +P D+NPL WW H+Q+ P L + +R L + ASS +ER+FSKAG +K R+RLRG V L+ L
Sbjct: 280 EIRRYSEEKLIPRDKNPLVWWQEHEQTFPSLSRLVVRYLGIVASSVPAERIFSKAGEVVSKKRSRLRGKTVNMLLFL 356
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: zinc (finger BED domain-containing protein 1-like n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=UPI00077CEF99) HSP 1 Score: 72.0 bits (175), Expect = 5.610e-13 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 28 TSEVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
+ EV RY+ LP++ NPL WW QQ LPLL +A R LC+PA+S ASER+FS AG + R+ L+ V QL+ L
Sbjct: 224 SEEVKRYRERASLPLEENPLQWWKE-QQDLPLLSSLAKRYLCIPATSVASERVFSTAGDIVSTKRSLLKHEHVDQLIFL 301
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: Dimer_Tnp_hAT (domain-containing protein (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8SIR0_9TELE) HSP 1 Score: 67.8 bits (164), Expect = 6.270e-13 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 31 SEVLRYKGLG------RLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
S+ + YK G +P D++PL WW H+Q+ P L ++A+R L V ASS +ER+FSKAG +K R+RL+G V L+ L
Sbjct: 8 SQSILYKTAGVYSEEKLIPRDKDPLLWWQEHEQTFPALSKLAVRYLGVVASSVPAERIFSKAGEVLSKRRSRLKGKTVNMLLFL 91
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Match: BED-type (domain-containing protein n=8 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8USA6_NOTFU) HSP 1 Score: 72.0 bits (175), Expect = 8.950e-13 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 28 TSEVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLCVPASSAASERLFSKAGLTETKLRNRLRGPKVAQLVTL 264
+ EV RY+ LP++ NPL WW QQ LPLL +A R LC+PA+S ASER+FS AG + R+ L+ V QL+ L
Sbjct: 577 SEEVKRYRERASLPLEENPLQWWKE-QQDLPLLSSLAKRYLCIPATSVASERVFSTAGDIVSTKRSLLKHEHVDQLIFL 654 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs8317.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs8317.2.1 >prot_H-canaliculatus_M_contigs8317.2.1 ID=prot_H-canaliculatus_M_contigs8317.2.1|Name=mRNA_H-canaliculatus_M_contigs8317.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=88bp RKIKYEAQLTSEVLRYKGLGRLPMDRNPLAWWDSHQQSLPLLREIAMRVLback to top mRNA from alignment at H-canaliculatus_M_contigs8317:4517..4780+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs8317.2.1 ID=mRNA_H-canaliculatus_M_contigs8317.2.1|Name=mRNA_H-canaliculatus_M_contigs8317.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=264bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8317:4517..4780+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs8317:4517..4780+ >mRNA_H-canaliculatus_M_contigs8317.2.1 ID=mRNA_H-canaliculatus_M_contigs8317.2.1|Name=mRNA_H-canaliculatus_M_contigs8317.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=264bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs8317:4517..4780+ (Hapterophycus canaliculatus Oshoro7m male)back to top |